RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 PBRM1Q86U86 1689 aa7.27□□□□□ -1.25
SCARNA15-201ENST00000607520 CENPBP07199 599 aaPredicted RBP7.27□□□□□ -1.25
SCARNA15-201ENST00000607520 KDM2AQ9Y2K7 1162 aa7.27□□□□□ -1.25
SCARNA15-201ENST00000607520 ABCA5Q8WWZ7 1642 aa7.27□□□□□ -1.25
SCARNA15-201ENST00000607520 ABCC2Q92887 1545 aa7.27□□□□□ -1.25
SCARNA15-201ENST00000607520 DENND4BO75064 1496 aaPredicted RBP7.27□□□□□ -1.25
SCARNA15-201ENST00000607520 PPP4R3CPQ6ZMV5 832 aa7.26□□□□□ -1.25
SCARNA15-201ENST00000607520 AKNAQ7Z591 1439 aa7.26□□□□□ -1.25
SCARNA15-201ENST00000607520 DMRT2Q9Y5R5 561 aa7.26□□□□□ -1.25
SCARNA15-201ENST00000607520 WDR7Q9Y4E6 1490 aa7.25□□□□□ -1.25
SCARNA15-201ENST00000607520 HECW1Q76N89 1606 aa7.25□□□□□ -1.25
SCARNA15-201ENST00000607520 NUP155O75694 1391 aa7.24□□□□□ -1.25
SCARNA15-201ENST00000607520 POGKQ9P215 609 aa7.24□□□□□ -1.25
SCARNA15-201ENST00000607520 CHD1O14646 1710 aa7.24□□□□□ -1.25
SCARNA15-201ENST00000607520 FYCO1Q9BQS8 1478 aa7.24□□□□□ -1.25
SCARNA15-201ENST00000607520 MYOM3Q5VTT5 1437 aa7.24□□□□□ -1.25
SCARNA15-201ENST00000607520 UGGT2Q9NYU1 1516 aa7.24□□□□□ -1.25
SCARNA15-201ENST00000607520 THEMISQ8N1K5 641 aaPredicted RBP7.24□□□□□ -1.25
SCARNA15-201ENST00000607520 ADGRL1O94910 1474 aa7.23□□□□□ -1.25
SCARNA15-201ENST00000607520 TONSLQ96HA7 1378 aa7.23□□□□□ -1.25
SCARNA15-201ENST00000607520 ARAP1Q96P48 1450 aa7.23□□□□□ -1.25
SCARNA15-201ENST00000607520 EPRSP07814 1512 aaKnown RBP7.22□□□□□ -1.25
SCARNA15-201ENST00000607520 FANCAO15360 1455 aa7.22□□□□□ -1.25
SCARNA15-201ENST00000607520 LMOD2Q6P5Q4 547 aa7.22□□□□□ -1.25
SCARNA15-201ENST00000607520 ZNF644Q9H582 1327 aaPredicted RBP7.22□□□□□ -1.25
SCARNA15-201ENST00000607520 MSH5O43196 834 aa7.21□□□□□ -1.25
SCARNA15-201ENST00000607520 ATP10BO94823 1461 aa7.21□□□□□ -1.25
SCARNA15-201ENST00000607520 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.21□□□□□ -1.26
SCARNA15-201ENST00000607520 PKD2Q13563 968 aa7.21□□□□□ -1.26
SCARNA15-201ENST00000607520 PLEKHG5O94827 1062 aa7.2□□□□□ -1.26
SCARNA15-201ENST00000607520 ANKLE2Q86XL3 938 aa7.2□□□□□ -1.26
SCARNA15-201ENST00000607520 CNGB1Q14028 1251 aaPredicted RBP7.2□□□□□ -1.26
SCARNA15-201ENST00000607520 KIF15Q9NS87 1388 aa7.19□□□□□ -1.26
SCARNA15-201ENST00000607520 CDK13Q14004 1512 aaKnown RBP7.19□□□□□ -1.26
SCARNA15-201ENST00000607520 KIAA0556O60303 1618 aa7.19□□□□□ -1.26
SCARNA15-201ENST00000607520 RIMBP3CA6NJZ7 1639 aa7.18□□□□□ -1.26
SCARNA15-201ENST00000607520 RIMBP3BA6NNM3 1639 aa7.18□□□□□ -1.26
SCARNA15-201ENST00000607520 RIMBP3Q9UFD9 1639 aa7.18□□□□□ -1.26
SCARNA15-201ENST00000607520 NCOA2Q15596 1464 aa7.18□□□□□ -1.26
SCARNA15-201ENST00000607520 TXNDC2Q86VQ3 553 aa7.18□□□□□ -1.26
SCARNA15-201ENST00000607520 KIF14Q15058 1648 aa7.17□□□□□ -1.26
SCARNA15-201ENST00000607520 VGFO15240 615 aaPredicted RBP7.17□□□□□ -1.26
SCARNA15-201ENST00000607520 PLCH2O75038 1416 aa7.17□□□□□ -1.26
SCARNA15-201ENST00000607520 NEFMP07197 916 aa7.17□□□□□ -1.26
SCARNA15-201ENST00000607520 EHBP1L1Q8N3D4 1523 aa7.16□□□□□ -1.26
SCARNA15-201ENST00000607520 A0A0G2JS52 829 aa7.16□□□□□ -1.26
SCARNA15-201ENST00000607520 MYT1Q01538 1121 aa7.16□□□□□ -1.26
SCARNA15-201ENST00000607520 RAPGEF6Q8TEU7 1601 aa7.16□□□□□ -1.26
SCARNA15-201ENST00000607520 ZBTB7CA1YPR0 619 aa7.16□□□□□ -1.26
SCARNA15-201ENST00000607520 STK26Q9P289 416 aa7.16□□□□□ -1.26
SCARNA15-201ENST00000607520 UHRF1BP1LA0JNW5 1464 aa7.16□□□□□ -1.26
SCARNA15-201ENST00000607520 DISP1Q96F81 1524 aa7.16□□□□□ -1.26
SCARNA15-201ENST00000607520 PELP1Q8IZL8 1130 aaKnown RBP7.16□□□□□ -1.26
SCARNA15-201ENST00000607520 CEBPAP49715 358 aaPredicted RBP7.15□□□□□ -1.26
SCARNA15-201ENST00000607520 LRRC9Q6ZRR7 1453 aa7.15□□□□□ -1.26
SCARNA15-201ENST00000607520 ABCC10Q5T3U5 1492 aa7.15□□□□□ -1.26
SCARNA15-201ENST00000607520 DIEXFQ68CQ4 756 aaKnown RBP7.15□□□□□ -1.27
SCARNA15-201ENST00000607520 SLC24A1O60721 1099 aa7.15□□□□□ -1.27
SCARNA15-201ENST00000607520 ATF3P18847 181 aa7.15□□□□□ -1.27
SCARNA15-201ENST00000607520 SLC52A1Q9NWF4 448 aa7.15□□□□□ -1.27
SCARNA15-201ENST00000607520 MIA2Q96PC5 1412 aa7.15□□□□□ -1.27
SCARNA15-201ENST00000607520 NUTM2DQ5VT03 806 aaPredicted RBP7.14□□□□□ -1.27
SCARNA15-201ENST00000607520 PROSER2Q86WR7 435 aaPredicted RBP7.14□□□□□ -1.27
SCARNA15-201ENST00000607520 YTHDC1Q96MU7 727 aaKnown RBP7.14□□□□□ -1.27
SCARNA15-201ENST00000607520 FGD6Q6ZV73 1430 aa7.14□□□□□ -1.27
SCARNA15-201ENST00000607520 DCAF11Q8TEB1 546 aa7.14□□□□□ -1.27
SCARNA15-201ENST00000607520 NUP153P49790 1475 aaKnown RBP7.13□□□□□ -1.27
SCARNA15-201ENST00000607520 CTTNBP2Q8WZ74 1663 aa7.13□□□□□ -1.27
SCARNA15-201ENST00000607520 MPHOSPH9Q99550 1183 aa7.13□□□□□ -1.27
SCARNA15-201ENST00000607520 NCBP3Q53F19 620 aaKnown RBP7.13□□□□□ -1.27
SCARNA15-201ENST00000607520 TMC1Q8TDI8 760 aa7.13□□□□□ -1.27
SCARNA15-201ENST00000607520 CLASP1Q7Z460 1538 aa7.13□□□□□ -1.27
SCARNA15-201ENST00000607520 ZNF518AQ6AHZ1 1483 aa7.13□□□□□ -1.27
SCARNA15-201ENST00000607520 C9orf84Q5VXU9 1444 aa7.13□□□□□ -1.27
SCARNA15-201ENST00000607520 CDCA8Q53HL2 280 aa7.13□□□□□ -1.27
SCARNA15-201ENST00000607520 ANKRD50Q9ULJ7 1429 aa7.12□□□□□ -1.27
SCARNA15-201ENST00000607520 NEO1Q92859 1461 aa7.12□□□□□ -1.27
SCARNA15-201ENST00000607520 MEX3CQ5U5Q3 659 aaKnown RBP7.12□□□□□ -1.27
SCARNA15-201ENST00000607520 CCDC141Q6ZP82 1450 aa7.12□□□□□ -1.27
SCARNA15-201ENST00000607520 SETD5Q9C0A6 1442 aa7.12□□□□□ -1.27
SCARNA15-201ENST00000607520 KDM5BQ9UGL1 1544 aa7.12□□□□□ -1.27
SCARNA15-201ENST00000607520 SAFB2Q14151 953 aaKnown RBP eCLIP7.11□□□□□ -1.27
SCARNA15-201ENST00000607520 SRPK2P78362 688 aaKnown RBP7.1□□□□□ -1.27
SCARNA15-201ENST00000607520 HSPA2P54652 639 aa7.1□□□□□ -1.27
SCARNA15-201ENST00000607520 PIP4K2BP78356 416 aa7.1□□□□□ -1.27
SCARNA15-201ENST00000607520 CCDC9Q9Y3X0 531 aaKnown RBP7.1□□□□□ -1.27
SCARNA15-201ENST00000607520 CARD11Q9BXL7 1154 aa7.09□□□□□ -1.27
SCARNA15-201ENST00000607520 ERCC6L2Q5T890 1561 aa7.09□□□□□ -1.27
SCARNA15-201ENST00000607520 DHX29Q7Z478 1369 aaKnown RBP7.09□□□□□ -1.27
SCARNA15-201ENST00000607520 CCDC144AA2RUR9 1427 aa7.09□□□□□ -1.27
SCARNA15-201ENST00000607520 PAK3O75914 559 aaPredicted RBP7.09□□□□□ -1.27
SCARNA15-201ENST00000607520 CNTLNQ9NXG0 1405 aa7.08□□□□□ -1.28
SCARNA15-201ENST00000607520 TOM1O60784 492 aa7.08□□□□□ -1.28
SCARNA15-201ENST00000607520 KDM6BO15054 1643 aa7.08□□□□□ -1.28
SCARNA15-201ENST00000607520 NGDNQ8NEJ9 315 aaKnown RBP7.08□□□□□ -1.28
SCARNA15-201ENST00000607520 SUPT6HQ7KZ85 1726 aaKnown RBP7.08□□□□□ -1.28
SCARNA15-201ENST00000607520 ATP10AO60312 1499 aa7.08□□□□□ -1.28
SCARNA15-201ENST00000607520 PCF11O94913 1555 aaKnown RBP7.08□□□□□ -1.28
SCARNA15-201ENST00000607520 UBAP1LF5GYI3 381 aa7.07□□□□□ -1.28
SCARNA15-201ENST00000607520 TNRQ92752 1358 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms