RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 NISCHQ9Y2I1 1504 aa10.54□□□□□ -0.72
SCARNA15-201ENST00000607520 AEBP2Q6ZN18 517 aaPredicted RBP10.09□□□□□ -0.79
SCARNA15-201ENST00000607520 CHIC1Q5VXU3 224 aa10.04□□□□□ -0.8
SCARNA15-201ENST00000607520 DCAF8L2P0C7V8 631 aa9.98□□□□□ -0.81
SCARNA15-201ENST00000607520 ABCC9O60706 1549 aa9.38□□□□□ -0.91
SCARNA15-201ENST00000607520 SHROOM4Q9ULL8 1493 aa9.09□□□□□ -0.95
SCARNA15-201ENST00000607520 CCDC180Q9P1Z9 1646 aa9.07□□□□□ -0.96
SCARNA15-201ENST00000607520 PABPN1Q86U42 306 aaKnown RBP eCLIP9.01□□□□□ -0.97
SCARNA15-201ENST00000607520 SUPT5HO00267 1087 aaKnown RBP8.89□□□□□ -0.99
SCARNA15-201ENST00000607520 RB1CC1Q8TDY2 1594 aa8.87□□□□□ -0.99
SCARNA15-201ENST00000607520 PHF23Q9BUL5 403 aaPredicted RBP8.85□□□□□ -0.99
SCARNA15-201ENST00000607520 NACADO15069 1562 aa8.78□□□□□ -1
SCARNA15-201ENST00000607520 ZCCHC6Q5VYS8 1495 aaKnown RBP8.69□□□□□ -1.02
SCARNA15-201ENST00000607520 SCRIBQ14160 1630 aa8.68□□□□□ -1.02
SCARNA15-201ENST00000607520 FAM9AQ8IZU1 332 aaPredicted RBP8.61□□□□□ -1.03
SCARNA15-201ENST00000607520 DCAF1Q9Y4B6 1507 aa8.54□□□□□ -1.04
SCARNA15-201ENST00000607520 SENP3Q9H4L4 574 aaPredicted RBP8.53□□□□□ -1.04
SCARNA15-201ENST00000607520 MYO15BQ96JP2 1530 aa8.51□□□□□ -1.05
SCARNA15-201ENST00000607520 CECR2Q9BXF3 1484 aa8.38□□□□□ -1.07
SCARNA15-201ENST00000607520 TRIM41Q8WV44 630 aa8.37□□□□□ -1.07
SCARNA15-201ENST00000607520 ERCC6Q03468 1493 aa8.37□□□□□ -1.07
SCARNA15-201ENST00000607520 FBLN2P98095 1184 aa8.35□□□□□ -1.07
SCARNA15-201ENST00000607520 EHMT2Q96KQ7 1210 aa8.34□□□□□ -1.07
SCARNA15-201ENST00000607520 BAZ1BQ9UIG0 1483 aaKnown RBP8.34□□□□□ -1.08
SCARNA15-201ENST00000607520 BAZ1AQ9NRL2 1556 aaPredicted RBP8.29□□□□□ -1.08
SCARNA15-201ENST00000607520 DNAJC5BQ9UF47 199 aa8.26□□□□□ -1.09
SCARNA15-201ENST00000607520 APLP2Q06481 763 aa8.26□□□□□ -1.09
SCARNA15-201ENST00000607520 RANGAP1P46060 587 aaPredicted RBP8.25□□□□□ -1.09
SCARNA15-201ENST00000607520 SMARCA2P51531 1590 aa8.25□□□□□ -1.09
SCARNA15-201ENST00000607520 TTBK1Q5TCY1 1321 aaPredicted RBP8.24□□□□□ -1.09
SCARNA15-201ENST00000607520 ATP1B4Q9UN42 357 aaPredicted RBP8.24□□□□□ -1.09
SCARNA15-201ENST00000607520 UBTFP17480 764 aaKnown RBP8.23□□□□□ -1.09
SCARNA15-201ENST00000607520 PLPPR3Q6T4P5 718 aa8.22□□□□□ -1.09
SCARNA15-201ENST00000607520 PDS5BQ9NTI5 1447 aa8.22□□□□□ -1.09
SCARNA15-201ENST00000607520 EIF4G1Q04637 1599 aaKnown RBP8.19□□□□□ -1.1
SCARNA15-201ENST00000607520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.18□□□□□ -1.1
SCARNA15-201ENST00000607520 HNRNPUL2Q1KMD3 747 aaKnown RBP8.18□□□□□ -1.1
SCARNA15-201ENST00000607520 RSF1Q96T23 1441 aaPredicted RBP8.17□□□□□ -1.1
SCARNA15-201ENST00000607520 CHMP7Q8WUX9 453 aaPredicted RBP8.16□□□□□ -1.1
SCARNA15-201ENST00000607520 ATAD2BQ9ULI0 1458 aa8.16□□□□□ -1.1
SCARNA15-201ENST00000607520 NPM1P06748 294 aaKnown RBP eCLIP8.14□□□□□ -1.11
SCARNA15-201ENST00000607520 CC2D2AQ9P2K1 1620 aa8.13□□□□□ -1.11
SCARNA15-201ENST00000607520 CADPSQ9ULU8 1353 aa8.12□□□□□ -1.11
SCARNA15-201ENST00000607520 NCAPD3P42695 1498 aa8.11□□□□□ -1.11
SCARNA15-201ENST00000607520 MROH2BQ7Z745 1585 aa8.1□□□□□ -1.11
SCARNA15-201ENST00000607520 MYT1LQ9UL68 1186 aa8.1□□□□□ -1.11
SCARNA15-201ENST00000607520 BICRAQ9NZM4 1560 aa8.1□□□□□ -1.11
SCARNA15-201ENST00000607520 SMARCA4P51532 1647 aa8.07□□□□□ -1.12
SCARNA15-201ENST00000607520 CEP164Q9UPV0 1460 aa8.03□□□□□ -1.12
SCARNA15-201ENST00000607520 TRHP20396 242 aaPredicted RBP8□□□□□ -1.13
SCARNA15-201ENST00000607520 OSCARQ8IYS5 282 aa8□□□□□ -1.13
SCARNA15-201ENST00000607520 FANCD2Q9BXW9 1451 aa7.98□□□□□ -1.13
SCARNA15-201ENST00000607520 TOP2AP11388 1531 aaKnown RBP7.98□□□□□ -1.13
SCARNA15-201ENST00000607520 CCDC88BA6NC98 1476 aa7.97□□□□□ -1.13
SCARNA15-201ENST00000607520 HMGXB3Q12766 1538 aa7.96□□□□□ -1.14
SCARNA15-201ENST00000607520 CSRNP3Q8WYN3 585 aa7.96□□□□□ -1.14
SCARNA15-201ENST00000607520 WRNQ14191 1432 aaPredicted RBP eCLIP7.96□□□□□ -1.14
SCARNA15-201ENST00000607520 ABCC8Q09428 1581 aa7.96□□□□□ -1.14
SCARNA15-201ENST00000607520 UNC13AQ9UPW8 1703 aa7.96□□□□□ -1.14
SCARNA15-201ENST00000607520 WIZO95785 1651 aa7.95□□□□□ -1.14
SCARNA15-201ENST00000607520 SOGA1O94964 1423 aa7.94□□□□□ -1.14
SCARNA15-201ENST00000607520 CDK11AQ9UQ88 783 aaPredicted RBP7.93□□□□□ -1.14
SCARNA15-201ENST00000607520 P3H3Q8IVL6 736 aa7.92□□□□□ -1.14
SCARNA15-201ENST00000607520 TDRD9Q8NDG6 1382 aaKnown RBP7.91□□□□□ -1.14
SCARNA15-201ENST00000607520 KIF27Q86VH2 1401 aa7.91□□□□□ -1.14
SCARNA15-201ENST00000607520 NESP48681 1621 aa7.91□□□□□ -1.14
SCARNA15-201ENST00000607520 FOXD1Q16676 465 aa7.89□□□□□ -1.15
SCARNA15-201ENST00000607520 MRC2Q9UBG0 1479 aa7.89□□□□□ -1.15
SCARNA15-201ENST00000607520 ARID3CA6NKF2 412 aa7.89□□□□□ -1.15
SCARNA15-201ENST00000607520 CUX2O14529 1486 aa7.87□□□□□ -1.15
SCARNA15-201ENST00000607520 CYB5RLQ6IPT4 315 aa7.87□□□□□ -1.15
SCARNA15-201ENST00000607520 LAMC3Q9Y6N6 1575 aa7.86□□□□□ -1.15
SCARNA15-201ENST00000607520 ESF1Q9H501 851 aaKnown RBP7.85□□□□□ -1.15
SCARNA15-201ENST00000607520 CFTRP13569 1480 aa7.85□□□□□ -1.15
SCARNA15-201ENST00000607520 KCNH8Q96L42 1107 aa7.81□□□□□ -1.16
SCARNA15-201ENST00000607520 CARMIL2Q6F5E8 1435 aa7.8□□□□□ -1.16
SCARNA15-201ENST00000607520 CARMIL1Q5VZK9 1371 aa7.8□□□□□ -1.16
SCARNA15-201ENST00000607520 IFT140Q96RY7 1462 aa7.8□□□□□ -1.16
SCARNA15-201ENST00000607520 PLEKHD1A6NEE1 506 aa7.79□□□□□ -1.16
SCARNA15-201ENST00000607520 EEA1Q15075 1411 aa7.78□□□□□ -1.16
SCARNA15-201ENST00000607520 JPH4Q96JJ6 628 aa7.78□□□□□ -1.16
SCARNA15-201ENST00000607520 ZNF777Q9ULD5 760 aaPredicted RBP7.77□□□□□ -1.17
SCARNA15-201ENST00000607520 LOC105371045A0A1W2PR82 267 aa7.76□□□□□ -1.17
SCARNA15-201ENST00000607520 PEG3Q9GZU2 1588 aa7.76□□□□□ -1.17
SCARNA15-201ENST00000607520 AQRO60306 1485 aaKnown RBP eCLIP7.76□□□□□ -1.172e-6■■■■■ 31.8
SCARNA15-201ENST00000607520 GAPVD1Q14C86 1478 aa7.75□□□□□ -1.17
SCARNA15-201ENST00000607520 FGD5Q6ZNL6 1462 aa7.75□□□□□ -1.17
SCARNA15-201ENST00000607520 PCGF6Q9BYE7 350 aa7.75□□□□□ -1.17
SCARNA15-201ENST00000607520 ITGAEP38570 1179 aa7.74□□□□□ -1.17
SCARNA15-201ENST00000607520 GRIN2BQ13224 1484 aa7.73□□□□□ -1.17
SCARNA15-201ENST00000607520 RAD54L2Q9Y4B4 1467 aa7.73□□□□□ -1.17
SCARNA15-201ENST00000607520 PPP6R1Q9UPN7 881 aa7.73□□□□□ -1.17
SCARNA15-201ENST00000607520 TOPBP1Q92547 1522 aa7.73□□□□□ -1.17
SCARNA15-201ENST00000607520 ARID4BQ4LE39 1312 aaPredicted RBP7.73□□□□□ -1.17
SCARNA15-201ENST00000607520 ADRA2BP18089 450 aa7.72□□□□□ -1.17
SCARNA15-201ENST00000607520 FAM50AQ14320 339 aaKnown RBP7.71□□□□□ -1.17
SCARNA15-201ENST00000607520 PPARGC1BQ86YN6 1023 aaKnown RBP7.68□□□□□ -1.18
SCARNA15-201ENST00000607520 DNMBPQ6XZF7 1577 aa7.68□□□□□ -1.18
SCARNA15-201ENST00000607520 PTPRGP23470 1445 aa7.68□□□□□ -1.18
SCARNA15-201ENST00000607520 FHAD1B1AJZ9 1412 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 891.3 ms