RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 PTPN23Q9H3S7 1636 aa20.56■□□□□ 0.88
RER1-209ENST00000605895 DAXXQ9UER7 740 aaPredicted RBP20.56■□□□□ 0.88
RER1-209ENST00000605895 PPM1GO15355 546 aaPredicted RBP20.55■□□□□ 0.88
RER1-209ENST00000605895 CDCA7LQ96GN5 454 aa20.55■□□□□ 0.88
RER1-209ENST00000605895 TCERG1O14776 1098 aaKnown RBP20.54■□□□□ 0.88
RER1-209ENST00000605895 UBE2Q2Q8WVN8 375 aa20.53■□□□□ 0.88
RER1-209ENST00000605895 PNISRQ8TF01 805 aaKnown RBP20.53■□□□□ 0.88
RER1-209ENST00000605895 RCAN3Q9UKA8 241 aa20.53■□□□□ 0.88
RER1-209ENST00000605895 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
RER1-209ENST00000605895 WASHC2CQ9Y4E1 1318 aa20.51■□□□□ 0.87
RER1-209ENST00000605895 SLC4A1APQ9BWU0 796 aaKnown RBP20.51■□□□□ 0.87
RER1-209ENST00000605895 USP35Q9P2H5 1018 aa20.5■□□□□ 0.87
RER1-209ENST00000605895 DENND4BO75064 1496 aaPredicted RBP20.47■□□□□ 0.87
RER1-209ENST00000605895 FRAT2O75474 233 aaPredicted RBP20.47■□□□□ 0.87
RER1-209ENST00000605895 CFTRP13569 1480 aa20.47■□□□□ 0.87
RER1-209ENST00000605895 KDM2AQ9Y2K7 1162 aa20.45■□□□□ 0.87
RER1-209ENST00000605895 CRBNQ96SW2 442 aa20.44■□□□□ 0.86
RER1-209ENST00000605895 CASKIN1Q8WXD9 1431 aa20.44■□□□□ 0.86
RER1-209ENST00000605895 CFAP43Q8NDM7 1665 aa20.43■□□□□ 0.86
RER1-209ENST00000605895 DHX29Q7Z478 1369 aaKnown RBP20.43■□□□□ 0.86
RER1-209ENST00000605895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.43■□□□□ 0.864e-7■■■■□ 23.8
RER1-209ENST00000605895 KDM6BO15054 1643 aa20.42■□□□□ 0.86
RER1-209ENST00000605895 NCAPD3P42695 1498 aa20.42■□□□□ 0.86
RER1-209ENST00000605895 DCAF11Q8TEB1 546 aa20.42■□□□□ 0.86
RER1-209ENST00000605895 RGS3P49796 1198 aa20.42■□□□□ 0.86
RER1-209ENST00000605895 C20orf194Q5TEA3 1177 aa20.41■□□□□ 0.86
RER1-209ENST00000605895 FGD5Q6ZNL6 1462 aa20.41■□□□□ 0.86
RER1-209ENST00000605895 MYOM3Q5VTT5 1437 aa20.41■□□□□ 0.86
RER1-209ENST00000605895 FYCO1Q9BQS8 1478 aa20.4■□□□□ 0.86
RER1-209ENST00000605895 ZNF644Q9H582 1327 aaPredicted RBP20.37■□□□□ 0.85
RER1-209ENST00000605895 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
RER1-209ENST00000605895 USP47Q96K76 1375 aa20.35■□□□□ 0.85
RER1-209ENST00000605895 DDRGK1Q96HY6 314 aa20.35■□□□□ 0.85
RER1-209ENST00000605895 MS4A1P11836 297 aa20.32■□□□□ 0.84
RER1-209ENST00000605895 CC2D1BQ5T0F9 858 aaKnown RBP20.32■□□□□ 0.84
RER1-209ENST00000605895 CARD11Q9BXL7 1154 aa20.32■□□□□ 0.84
RER1-209ENST00000605895 SPATA31E1Q6ZUB1 1445 aa20.32■□□□□ 0.84
RER1-209ENST00000605895 ST20-MTHFSA0A0A6YYL1 179 aa20.31■□□□□ 0.84
RER1-209ENST00000605895 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
RER1-209ENST00000605895 ANKRD30BQ9BXX2 1392 aa20.3■□□□□ 0.84
RER1-209ENST00000605895 POGKQ9P215 609 aa20.28■□□□□ 0.84
RER1-209ENST00000605895 SLKQ9H2G2 1235 aaPredicted RBP20.27■□□□□ 0.84
RER1-209ENST00000605895 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
RER1-209ENST00000605895 MYBBP1AQ9BQG0 1328 aaKnown RBP20.23■□□□□ 0.83
RER1-209ENST00000605895 SNAPC4Q5SXM2 1469 aa20.22■□□□□ 0.83
RER1-209ENST00000605895 PKD2Q13563 968 aa20.22■□□□□ 0.83
RER1-209ENST00000605895 SPRYD3Q8NCJ5 442 aa20.22■□□□□ 0.83
RER1-209ENST00000605895 ARID4BQ4LE39 1312 aaPredicted RBP20.21■□□□□ 0.83
RER1-209ENST00000605895 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
RER1-209ENST00000605895 RRAGDQ9NQL2 400 aaPredicted RBP20.2■□□□□ 0.82
RER1-209ENST00000605895 TEX14Q8IWB6 1497 aa20.2■□□□□ 0.82
RER1-209ENST00000605895 TDRD9Q8NDG6 1382 aaKnown RBP20.2■□□□□ 0.82
RER1-209ENST00000605895 RSPH6AQ9H0K4 717 aa20.19■□□□□ 0.82
RER1-209ENST00000605895 GZF1Q9H116 711 aaPredicted RBP20.19■□□□□ 0.82
RER1-209ENST00000605895 BCORL1Q5H9F3 1711 aa20.18■□□□□ 0.82
RER1-209ENST00000605895 C8orf34Q49A92 452 aa20.18■□□□□ 0.82
RER1-209ENST00000605895 MAGI3Q5TCQ9 1506 aa20.17■□□□□ 0.82
RER1-209ENST00000605895 KIF15Q9NS87 1388 aa20.17■□□□□ 0.82
RER1-209ENST00000605895 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
RER1-209ENST00000605895 VSIG10Q8N0Z9 540 aa20.16■□□□□ 0.82
RER1-209ENST00000605895 PKNOX2Q96KN3 472 aa20.16■□□□□ 0.82
RER1-209ENST00000605895 NAP1L5Q96NT1 182 aaPredicted RBP20.16■□□□□ 0.82
RER1-209ENST00000605895 FAM43AQ8N2R8 423 aa20.15■□□□□ 0.82
RER1-209ENST00000605895 LRPPRCP42704 1394 aaKnown RBP20.14■□□□□ 0.82
RER1-209ENST00000605895 RGL3Q3MIN7 710 aa20.13■□□□□ 0.81
RER1-209ENST00000605895 NLRP13Q86W25 1043 aa20.13■□□□□ 0.81
RER1-209ENST00000605895 RALBP1Q15311 655 aa20.12■□□□□ 0.81
RER1-209ENST00000605895 CADPSQ9ULU8 1353 aa20.12■□□□□ 0.81
RER1-209ENST00000605895 BRD4O60885 1362 aaPredicted RBP20.11■□□□□ 0.81
RER1-209ENST00000605895 HECW1Q76N89 1606 aa20.11■□□□□ 0.81
RER1-209ENST00000605895 SUPT6HQ7KZ85 1726 aaKnown RBP20.11■□□□□ 0.81
RER1-209ENST00000605895 SEC24BO95487 1268 aa20.11■□□□□ 0.81
RER1-209ENST00000605895 LRRIQ1Q96JM4 1722 aa20.1■□□□□ 0.81
RER1-209ENST00000605895 EFCAB5A4FU69 1503 aa20.1■□□□□ 0.81
RER1-209ENST00000605895 CDK13Q14004 1512 aaKnown RBP20.08■□□□□ 0.8
RER1-209ENST00000605895 MIA2Q96PC5 1412 aa20.07■□□□□ 0.8
RER1-209ENST00000605895 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
RER1-209ENST00000605895 UGGT2Q9NYU1 1516 aa20.07■□□□□ 0.8
RER1-209ENST00000605895 PDE3BQ13370 1112 aa20.07■□□□□ 0.8
RER1-209ENST00000605895 GRIN2BQ13224 1484 aa20.06■□□□□ 0.8
RER1-209ENST00000605895 PRDM2Q13029 1718 aa20.06■□□□□ 0.8
RER1-209ENST00000605895 CENPQQ7L2Z9 268 aaPredicted RBP20.05■□□□□ 0.8
RER1-209ENST00000605895 PANK2Q9BZ23 570 aa20.05■□□□□ 0.8
RER1-209ENST00000605895 KTN1Q86UP2 1357 aaKnown RBP20.05■□□□□ 0.8
RER1-209ENST00000605895 KDM2BQ8NHM5 1336 aa20.05■□□□□ 0.8
RER1-209ENST00000605895 CCDC146Q8IYE0 955 aa20.04■□□□□ 0.8
RER1-209ENST00000605895 NBPF1Q3BBV0 1214 aa20.03■□□□□ 0.8
RER1-209ENST00000605895 EHBP1L1Q8N3D4 1523 aa20.03■□□□□ 0.8
RER1-209ENST00000605895 ZMYND15Q9H091 742 aa20.02■□□□□ 0.8
RER1-209ENST00000605895 PANK3Q9H999 370 aa20.02■□□□□ 0.79
RER1-209ENST00000605895 BCAR3O75815 825 aa20.01■□□□□ 0.79
RER1-209ENST00000605895 DAPK1P53355 1430 aa20■□□□□ 0.79
RER1-209ENST00000605895 ABCC5O15440 1437 aa19.99■□□□□ 0.79
RER1-209ENST00000605895 IGHDP01880 384 aa19.99■□□□□ 0.79
RER1-209ENST00000605895 ABCA5Q8WWZ7 1642 aa19.99■□□□□ 0.79
RER1-209ENST00000605895 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
RER1-209ENST00000605895 ROCK2O75116 1388 aaKnown RBP19.98■□□□□ 0.79
RER1-209ENST00000605895 GCC2Q8IWJ2 1684 aa19.98■□□□□ 0.79
RER1-209ENST00000605895 FANCD2Q9BXW9 1451 aa19.97■□□□□ 0.79
RER1-209ENST00000605895 CFDP1Q9UEE9 299 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms