RNA–Protein interactions for RNA: ENST00000605086.5

FOCAD-216, Transcript of focadhesin, humanhuman

TSL 1 (best) BASIC

Gene FOCAD, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-216ENST00000605086 FGD5Q6ZNL6 1462 aa9.4□□□□□ -0.91
FOCAD-216ENST00000605086 WDR43Q15061 677 aaKnown RBP eCLIP9.39□□□□□ -0.91
FOCAD-216ENST00000605086 SMG6Q86US8 1419 aaKnown RBP9.39□□□□□ -0.91
FOCAD-216ENST00000605086 PLIN1O60240 522 aa9.39□□□□□ -0.91
FOCAD-216ENST00000605086 CC2D1BQ5T0F9 858 aaKnown RBP9.39□□□□□ -0.91
FOCAD-216ENST00000605086 FYCO1Q9BQS8 1478 aa9.39□□□□□ -0.91
FOCAD-216ENST00000605086 PKD2Q13563 968 aa9.38□□□□□ -0.91
FOCAD-216ENST00000605086 GSE1Q14687 1217 aa9.38□□□□□ -0.91
FOCAD-216ENST00000605086 CFDP1Q9UEE9 299 aaPredicted RBP9.38□□□□□ -0.91
FOCAD-216ENST00000605086 CADPSQ9ULU8 1353 aa9.38□□□□□ -0.91
FOCAD-216ENST00000605086 BIVM-ERCC5R4GMW8 1640 aa9.38□□□□□ -0.91
FOCAD-216ENST00000605086 RALBP1Q15311 655 aa9.38□□□□□ -0.91
FOCAD-216ENST00000605086 RGL3Q3MIN7 710 aa9.38□□□□□ -0.91
FOCAD-216ENST00000605086 NCOA2Q15596 1464 aa9.37□□□□□ -0.91
FOCAD-216ENST00000605086 MS4A1P11836 297 aa9.37□□□□□ -0.91
FOCAD-216ENST00000605086 DCAF11Q8TEB1 546 aa9.37□□□□□ -0.91
FOCAD-216ENST00000605086 USP47Q96K76 1375 aa9.37□□□□□ -0.91
FOCAD-216ENST00000605086 PCF11O94913 1555 aaKnown RBP9.37□□□□□ -0.91
FOCAD-216ENST00000605086 BICRAQ9NZM4 1560 aa9.37□□□□□ -0.91
FOCAD-216ENST00000605086 UPF2Q9HAU5 1272 aaKnown RBP9.36□□□□□ -0.91
FOCAD-216ENST00000605086 CFTRP13569 1480 aa9.36□□□□□ -0.91
FOCAD-216ENST00000605086 TDRD9Q8NDG6 1382 aaKnown RBP9.36□□□□□ -0.91
FOCAD-216ENST00000605086 TSPY4P0CV99 314 aa9.36□□□□□ -0.91
FOCAD-216ENST00000605086 TSPY10P0CW01 314 aa9.36□□□□□ -0.91
FOCAD-216ENST00000605086 PDE3BQ13370 1112 aa9.35□□□□□ -0.91
FOCAD-216ENST00000605086 BRPF3Q9ULD4 1205 aa9.35□□□□□ -0.91
FOCAD-216ENST00000605086 PNISRQ8TF01 805 aaKnown RBP9.35□□□□□ -0.91
FOCAD-216ENST00000605086 MYBBP1AQ9BQG0 1328 aaKnown RBP9.35□□□□□ -0.91
FOCAD-216ENST00000605086 NLRP13Q86W25 1043 aa9.35□□□□□ -0.91
FOCAD-216ENST00000605086 BACH2Q9BYV9 841 aa9.35□□□□□ -0.91
FOCAD-216ENST00000605086 UNC13AQ9UPW8 1703 aa9.35□□□□□ -0.91
FOCAD-216ENST00000605086 ST20-MTHFSA0A0A6YYL1 179 aa9.34□□□□□ -0.91
FOCAD-216ENST00000605086 KIF15Q9NS87 1388 aa9.34□□□□□ -0.91
FOCAD-216ENST00000605086 BECN1Q14457 450 aa9.34□□□□□ -0.91
FOCAD-216ENST00000605086 GLIPR1L2Q4G1C9 344 aa9.34□□□□□ -0.91
FOCAD-216ENST00000605086 CRBNQ96SW2 442 aa9.34□□□□□ -0.91
FOCAD-216ENST00000605086 NCAPD3P42695 1498 aa9.34□□□□□ -0.91
FOCAD-216ENST00000605086 PTPRKQ15262 1439 aa9.34□□□□□ -0.91
FOCAD-216ENST00000605086 ROCK2O75116 1388 aaKnown RBP9.34□□□□□ -0.91
FOCAD-216ENST00000605086 KTN1Q86UP2 1357 aaKnown RBP9.34□□□□□ -0.91
FOCAD-216ENST00000605086 FBLN2P98095 1184 aa9.34□□□□□ -0.91
FOCAD-216ENST00000605086 NCOA1Q15788 1441 aa9.34□□□□□ -0.91
FOCAD-216ENST00000605086 NFKBIBQ15653 356 aa9.34□□□□□ -0.91
FOCAD-216ENST00000605086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.34□□□□□ -0.91
FOCAD-216ENST00000605086 RAD54L2Q9Y4B4 1467 aa9.33□□□□□ -0.92
FOCAD-216ENST00000605086 AQRO60306 1485 aaKnown RBP eCLIP9.32□□□□□ -0.92
FOCAD-216ENST00000605086 CDCA7LQ96GN5 454 aa9.31□□□□□ -0.92
FOCAD-216ENST00000605086 PTPN23Q9H3S7 1636 aa9.31□□□□□ -0.92
FOCAD-216ENST00000605086 FRAT1Q92837 279 aaPredicted RBP9.31□□□□□ -0.92
FOCAD-216ENST00000605086 KNSTRNQ9Y448 316 aa9.3□□□□□ -0.92
FOCAD-216ENST00000605086 ZNF644Q9H582 1327 aaPredicted RBP9.29□□□□□ -0.92
FOCAD-216ENST00000605086 EFCAB5A4FU69 1503 aa9.29□□□□□ -0.92
FOCAD-216ENST00000605086 SLKQ9H2G2 1235 aaPredicted RBP9.29□□□□□ -0.92
FOCAD-216ENST00000605086 FAM161AQ3B820 660 aa9.29□□□□□ -0.92
FOCAD-216ENST00000605086 SKAP1Q86WV1 359 aa9.29□□□□□ -0.92
FOCAD-216ENST00000605086 NAP1L5Q96NT1 182 aaPredicted RBP9.28□□□□□ -0.92
FOCAD-216ENST00000605086 NUP155O75694 1391 aa9.28□□□□□ -0.92
FOCAD-216ENST00000605086 ARID4BQ4LE39 1312 aaPredicted RBP9.28□□□□□ -0.92
FOCAD-216ENST00000605086 BRD4O60885 1362 aaPredicted RBP9.28□□□□□ -0.92
FOCAD-216ENST00000605086 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
FOCAD-216ENST00000605086 CENPQQ7L2Z9 268 aaPredicted RBP9.27□□□□□ -0.92
FOCAD-216ENST00000605086 ANKRD30BQ9BXX2 1392 aa9.26□□□□□ -0.93
FOCAD-216ENST00000605086 FRAT2O75474 233 aaPredicted RBP9.26□□□□□ -0.93
FOCAD-216ENST00000605086 TMF1P82094 1093 aa9.26□□□□□ -0.93
FOCAD-216ENST00000605086 L1TD1Q5T7N2 865 aaKnown RBP9.26□□□□□ -0.93
FOCAD-216ENST00000605086 RSPH6AQ9H0K4 717 aa9.25□□□□□ -0.93
FOCAD-216ENST00000605086 PLEKHD1A6NEE1 506 aa9.25□□□□□ -0.93
FOCAD-216ENST00000605086 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
FOCAD-216ENST00000605086 GOLGA2Q08379 1002 aa9.24□□□□□ -0.93
FOCAD-216ENST00000605086 HMGXB3Q12766 1538 aa9.24□□□□□ -0.93
FOCAD-216ENST00000605086 HSP90AA1P07900 732 aaKnown RBP9.24□□□□□ -0.93
FOCAD-216ENST00000605086 EHBP1L1Q8N3D4 1523 aa9.24□□□□□ -0.93
FOCAD-216ENST00000605086 ANKRD30AQ9BXX3 1397 aa9.24□□□□□ -0.93
FOCAD-216ENST00000605086 NEUROD2Q15784 382 aa9.23□□□□□ -0.93
FOCAD-216ENST00000605086 PANK3Q9H999 370 aa9.23□□□□□ -0.93
FOCAD-216ENST00000605086 GZF1Q9H116 711 aaPredicted RBP9.23□□□□□ -0.93
FOCAD-216ENST00000605086 MIA2Q96PC5 1412 aa9.23□□□□□ -0.93
FOCAD-216ENST00000605086 RNF123Q5XPI4 1314 aa9.23□□□□□ -0.93
FOCAD-216ENST00000605086 CFAP43Q8NDM7 1665 aa9.23□□□□□ -0.93
FOCAD-216ENST00000605086 SUPT6HQ7KZ85 1726 aaKnown RBP9.23□□□□□ -0.93
FOCAD-216ENST00000605086 RPRD2Q5VT52 1461 aaKnown RBP9.22□□□□□ -0.93
FOCAD-216ENST00000605086 TRIM44Q96DX7 344 aaPredicted RBP9.22□□□□□ -0.93
FOCAD-216ENST00000605086 PNNQ9H307 717 aaKnown RBP9.21□□□□□ -0.93
FOCAD-216ENST00000605086 CCDC146Q8IYE0 955 aa9.21□□□□□ -0.94
FOCAD-216ENST00000605086 ANP32BQ92688 251 aaKnown RBP9.21□□□□□ -0.94
FOCAD-216ENST00000605086 CDCA8Q53HL2 280 aa9.2□□□□□ -0.94
FOCAD-216ENST00000605086 C20orf194Q5TEA3 1177 aa9.19□□□□□ -0.94
FOCAD-216ENST00000605086 GAPVD1Q14C86 1478 aa9.19□□□□□ -0.94
FOCAD-216ENST00000605086 DHX29Q7Z478 1369 aaKnown RBP9.19□□□□□ -0.94
FOCAD-216ENST00000605086 CHMP7Q8WUX9 453 aaPredicted RBP9.19□□□□□ -0.94
FOCAD-216ENST00000605086 ADAMTS8Q9UP79 889 aa9.19□□□□□ -0.94
FOCAD-216ENST00000605086 POLA1P09884 1462 aaPredicted RBP9.19□□□□□ -0.94
FOCAD-216ENST00000605086 GOLGA6L3A6NEY3 463 aa9.19□□□□□ -0.94
FOCAD-216ENST00000605086 WASHC2CQ9Y4E1 1318 aa9.18□□□□□ -0.94
FOCAD-216ENST00000605086 DAPK1P53355 1430 aa9.18□□□□□ -0.94
FOCAD-216ENST00000605086 KIAA1107Q9UPP5 1409 aa9.18□□□□□ -0.94
FOCAD-216ENST00000605086 FAM43AQ8N2R8 423 aa9.17□□□□□ -0.94
FOCAD-216ENST00000605086 HNRNPMP52272 730 aaKnown RBP eCLIP9.16□□□□□ -0.94
FOCAD-216ENST00000605086 ABCA10Q8WWZ4 1543 aa9.16□□□□□ -0.94
FOCAD-216ENST00000605086 TNNT2P45379 298 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms