RNA–Protein interactions for RNA: ENST00000605086.5

FOCAD-216, Transcript of focadhesin, humanhuman

TSL 1 (best) BASIC

Gene FOCAD, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-216ENST00000605086 NISCHQ9Y2I1 1504 aa13.06□□□□□ -0.32
FOCAD-216ENST00000605086 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
FOCAD-216ENST00000605086 SHROOM4Q9ULL8 1493 aa12.01□□□□□ -0.49
FOCAD-216ENST00000605086 DCAF8L2P0C7V8 631 aa11.78□□□□□ -0.52
FOCAD-216ENST00000605086 PCGF6Q9BYE7 350 aa11.78□□□□□ -0.52
FOCAD-216ENST00000605086 HRCP23327 699 aa11.74□□□□□ -0.53
FOCAD-216ENST00000605086 PPARGC1BQ86YN6 1023 aaKnown RBP11.54□□□□□ -0.56
FOCAD-216ENST00000605086 CHIC1Q5VXU3 224 aa11.5□□□□□ -0.57
FOCAD-216ENST00000605086 PELP1Q8IZL8 1130 aaKnown RBP11.4□□□□□ -0.58
FOCAD-216ENST00000605086 LOC105371045A0A1W2PR82 267 aa11.35□□□□□ -0.59
FOCAD-216ENST00000605086 TRIM26Q12899 539 aaPredicted RBP11.32□□□□□ -0.6
FOCAD-216ENST00000605086 EHMT2Q96KQ7 1210 aa11.31□□□□□ -0.6
FOCAD-216ENST00000605086 ZEB1P37275 1124 aaPredicted RBP11.31□□□□□ -0.6
FOCAD-216ENST00000605086 FAM9AQ8IZU1 332 aaPredicted RBP11.24□□□□□ -0.61
FOCAD-216ENST00000605086 MYO15BQ96JP2 1530 aa11.23□□□□□ -0.61
FOCAD-216ENST00000605086 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
FOCAD-216ENST00000605086 DCAF1Q9Y4B6 1507 aa11.08□□□□□ -0.64
FOCAD-216ENST00000605086 CENPBP07199 599 aaPredicted RBP11.07□□□□□ -0.64
FOCAD-216ENST00000605086 CCER1Q8TC90 406 aaPredicted RBP11.07□□□□□ -0.64
FOCAD-216ENST00000605086 ZCCHC6Q5VYS8 1495 aaKnown RBP11.02□□□□□ -0.65
FOCAD-216ENST00000605086 TTBK1Q5TCY1 1321 aaPredicted RBP11.01□□□□□ -0.65
FOCAD-216ENST00000605086 MYT1Q01538 1121 aa10.99□□□□□ -0.65
FOCAD-216ENST00000605086 SCAF1Q9H7N4 1312 aaKnown RBP10.99□□□□□ -0.65
FOCAD-216ENST00000605086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.92□□□□□ -0.66
FOCAD-216ENST00000605086 YTHDC1Q96MU7 727 aaKnown RBP10.9□□□□□ -0.67
FOCAD-216ENST00000605086 ACIN1Q9UKV3 1341 aaKnown RBP10.89□□□□□ -0.67
FOCAD-216ENST00000605086 GTF3C3Q9Y5Q9 886 aa10.89□□□□□ -0.67
FOCAD-216ENST00000605086 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
FOCAD-216ENST00000605086 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
FOCAD-216ENST00000605086 NEUROD1Q13562 356 aa10.82□□□□□ -0.68
FOCAD-216ENST00000605086 UBTFP17480 764 aaKnown RBP10.71□□□□□ -0.7
FOCAD-216ENST00000605086 APLP2Q06481 763 aa10.69□□□□□ -0.7
FOCAD-216ENST00000605086 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
FOCAD-216ENST00000605086 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
FOCAD-216ENST00000605086 RANGAP1P46060 587 aaPredicted RBP10.6□□□□□ -0.71
FOCAD-216ENST00000605086 RSF1Q96T23 1441 aaPredicted RBP10.56□□□□□ -0.72
FOCAD-216ENST00000605086 MIER1Q8N108 512 aa10.5□□□□□ -0.73
FOCAD-216ENST00000605086 SCRIBQ14160 1630 aa10.48□□□□□ -0.73
FOCAD-216ENST00000605086 NEFLP07196 543 aa10.41□□□□□ -0.74
FOCAD-216ENST00000605086 CSRNP3Q8WYN3 585 aa10.41□□□□□ -0.74
FOCAD-216ENST00000605086 ABCC9O60706 1549 aa10.41□□□□□ -0.74
FOCAD-216ENST00000605086 RB1CC1Q8TDY2 1594 aa10.41□□□□□ -0.74
FOCAD-216ENST00000605086 BCANQ96GW7 911 aa10.37□□□□□ -0.75
FOCAD-216ENST00000605086 ERICH6Q7L0X2 663 aa10.36□□□□□ -0.75
FOCAD-216ENST00000605086 ITGAEP38570 1179 aa10.36□□□□□ -0.75
FOCAD-216ENST00000605086 CEP162Q5TB80 1403 aa10.35□□□□□ -0.75
FOCAD-216ENST00000605086 CLSPNQ9HAW4 1339 aa10.32□□□□□ -0.76
FOCAD-216ENST00000605086 CECR2Q9BXF3 1484 aa10.28□□□□□ -0.76
FOCAD-216ENST00000605086 TNIKQ9UKE5 1360 aa10.27□□□□□ -0.77
FOCAD-216ENST00000605086 SUPT16HQ9Y5B9 1047 aaKnown RBP10.26□□□□□ -0.77
FOCAD-216ENST00000605086 ANP32EQ9BTT0 268 aa10.23□□□□□ -0.77
FOCAD-216ENST00000605086 FKBP8Q14318 412 aa10.23□□□□□ -0.77
FOCAD-216ENST00000605086 ATP1B4Q9UN42 357 aaPredicted RBP10.22□□□□□ -0.77
FOCAD-216ENST00000605086 MROH2BQ7Z745 1585 aa10.21□□□□□ -0.77
FOCAD-216ENST00000605086 SOGA1O94964 1423 aa10.21□□□□□ -0.78
FOCAD-216ENST00000605086 WRNQ14191 1432 aaPredicted RBP eCLIP10.19□□□□□ -0.78
FOCAD-216ENST00000605086 CLIP1P30622 1438 aa10.18□□□□□ -0.78
FOCAD-216ENST00000605086 CCDC88BA6NC98 1476 aa10.18□□□□□ -0.78
FOCAD-216ENST00000605086 GOLGA3Q08378 1498 aa10.18□□□□□ -0.78
FOCAD-216ENST00000605086 EEA1Q15075 1411 aa10.18□□□□□ -0.78
FOCAD-216ENST00000605086 TSHZ2Q9NRE2 1034 aa10.16□□□□□ -0.78
FOCAD-216ENST00000605086 ABCC8Q09428 1581 aa10.16□□□□□ -0.78
FOCAD-216ENST00000605086 DDX10Q13206 875 aaKnown RBP10.15□□□□□ -0.78
FOCAD-216ENST00000605086 ANP32CO43423 234 aa10.13□□□□□ -0.79
FOCAD-216ENST00000605086 WIZO95785 1651 aa10.12□□□□□ -0.79
FOCAD-216ENST00000605086 BCL11AQ9H165 835 aa10.12□□□□□ -0.79
FOCAD-216ENST00000605086 PABPN1Q86U42 306 aaKnown RBP eCLIP10.11□□□□□ -0.79
FOCAD-216ENST00000605086 FAM50AQ14320 339 aaKnown RBP10.11□□□□□ -0.79
FOCAD-216ENST00000605086 TRIM52Q96A61 297 aa10.11□□□□□ -0.79
FOCAD-216ENST00000605086 CDK11AQ9UQ88 783 aaPredicted RBP10.09□□□□□ -0.79
FOCAD-216ENST00000605086 CEP164Q9UPV0 1460 aa10.07□□□□□ -0.8
FOCAD-216ENST00000605086 RUSC2Q8N2Y8 1516 aa10.06□□□□□ -0.8
FOCAD-216ENST00000605086 BAZ1AQ9NRL2 1556 aaPredicted RBP10.06□□□□□ -0.8
FOCAD-216ENST00000605086 HIRIP3Q9BW71 556 aaPredicted RBP10.05□□□□□ -0.8
FOCAD-216ENST00000605086 VPS8Q8N3P4 1428 aa10.04□□□□□ -0.8
FOCAD-216ENST00000605086 NACADO15069 1562 aa10.04□□□□□ -0.8
FOCAD-216ENST00000605086 KCNH8Q96L42 1107 aa10.03□□□□□ -0.8
FOCAD-216ENST00000605086 RBM19Q9Y4C8 960 aaKnown RBP10.02□□□□□ -0.8
FOCAD-216ENST00000605086 IRX6P78412 446 aaPredicted RBP10□□□□□ -0.81
FOCAD-216ENST00000605086 HNRNPUQ00839 825 aaKnown RBP eCLIP10□□□□□ -0.81
FOCAD-216ENST00000605086 DHX57Q6P158 1386 aaKnown RBP9.99□□□□□ -0.81
FOCAD-216ENST00000605086 CNGB1Q14028 1251 aaPredicted RBP9.98□□□□□ -0.81
FOCAD-216ENST00000605086 KANK4Q5T7N3 995 aaPredicted RBP9.98□□□□□ -0.81
FOCAD-216ENST00000605086 SIN3AQ96ST3 1273 aa9.96□□□□□ -0.81
FOCAD-216ENST00000605086 TOP2AP11388 1531 aaKnown RBP9.95□□□□□ -0.82
FOCAD-216ENST00000605086 RTL5Q5HYW3 569 aaPredicted RBP9.95□□□□□ -0.82
FOCAD-216ENST00000605086 P3H3Q8IVL6 736 aa9.94□□□□□ -0.82
FOCAD-216ENST00000605086 CCNB3Q8WWL7 1395 aa9.93□□□□□ -0.82
FOCAD-216ENST00000605086 POLR3GLQ9BT43 218 aa9.93□□□□□ -0.82
FOCAD-216ENST00000605086 TONSLQ96HA7 1378 aa9.93□□□□□ -0.82
FOCAD-216ENST00000605086 RAPGEF2Q9Y4G8 1499 aa9.9□□□□□ -0.82
FOCAD-216ENST00000605086 NBR1Q14596 966 aa9.89□□□□□ -0.83
FOCAD-216ENST00000605086 AEBP2Q6ZN18 517 aaPredicted RBP9.89□□□□□ -0.83
FOCAD-216ENST00000605086 MYT1LQ9UL68 1186 aa9.89□□□□□ -0.83
FOCAD-216ENST00000605086 CCER2I3L3R5 266 aa9.88□□□□□ -0.83
FOCAD-216ENST00000605086 FAM9BQ8IZU0 186 aa9.88□□□□□ -0.83
FOCAD-216ENST00000605086 RAB3GAP2Q9H2M9 1393 aa9.87□□□□□ -0.83
FOCAD-216ENST00000605086 SMARCA2P51531 1590 aa9.87□□□□□ -0.83
FOCAD-216ENST00000605086 ANP32AP39687 249 aaKnown RBP9.85□□□□□ -0.83
FOCAD-216ENST00000605086 BAZ1BQ9UIG0 1483 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms