RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 MIA2Q96PC5 1412 aa18.03■□□□□ 0.48
SNORD3C-201ENST00000580533 PHLDB1Q86UU1 1377 aa18.03■□□□□ 0.48
SNORD3C-201ENST00000580533 GPATCH8Q9UKJ3 1502 aaKnown RBP18.03■□□□□ 0.48
SNORD3C-201ENST00000580533 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
SNORD3C-201ENST00000580533 CDC42BPAQ5VT25 1732 aa18.01■□□□□ 0.47
SNORD3C-201ENST00000580533 FANCAO15360 1455 aa18■□□□□ 0.47
SNORD3C-201ENST00000580533 PLEKHH2Q8IVE3 1493 aa18■□□□□ 0.47
SNORD3C-201ENST00000580533 NEO1Q92859 1461 aa18■□□□□ 0.47
SNORD3C-201ENST00000580533 FGD6Q6ZV73 1430 aa17.97■□□□□ 0.47
SNORD3C-201ENST00000580533 CDC42BPBQ9Y5S2 1711 aa17.95■□□□□ 0.46
SNORD3C-201ENST00000580533 ZNF777Q9ULD5 760 aaPredicted RBP17.94■□□□□ 0.46
SNORD3C-201ENST00000580533 TSPOAP1O95153 1857 aa17.93■□□□□ 0.46
SNORD3C-201ENST00000580533 AKNAQ7Z591 1439 aa17.93■□□□□ 0.46
SNORD3C-201ENST00000580533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.91■□□□□ 0.461e-76■■■□□ 15.1
SNORD3C-201ENST00000580533 PTPN23Q9H3S7 1636 aa17.91■□□□□ 0.46
SNORD3C-201ENST00000580533 KIAA1107Q9UPP5 1409 aa17.91■□□□□ 0.46
SNORD3C-201ENST00000580533 ADGRL1O94910 1474 aa17.91■□□□□ 0.46
SNORD3C-201ENST00000580533 CAMSAP2Q08AD1 1489 aa17.91■□□□□ 0.46
SNORD3C-201ENST00000580533 RSPH4AQ5TD94 716 aa17.91■□□□□ 0.46
SNORD3C-201ENST00000580533 RRBP1Q9P2E9 1410 aaKnown RBP17.9■□□□□ 0.46
SNORD3C-201ENST00000580533 PPRC1Q5VV67 1664 aaKnown RBP17.9■□□□□ 0.46
SNORD3C-201ENST00000580533 TCOF1Q13428 1488 aaKnown RBP17.9■□□□□ 0.46
SNORD3C-201ENST00000580533 ABCC1P33527 1531 aa17.88■□□□□ 0.45
SNORD3C-201ENST00000580533 SAMD9LQ8IVG5 1584 aa17.88■□□□□ 0.45
SNORD3C-201ENST00000580533 FAM50AQ14320 339 aaKnown RBP17.88■□□□□ 0.45
SNORD3C-201ENST00000580533 SCAPERQ9BY12 1400 aa17.86■□□□□ 0.45
SNORD3C-201ENST00000580533 DENND4BO75064 1496 aaPredicted RBP17.86■□□□□ 0.45
SNORD3C-201ENST00000580533 ARHGEF5Q12774 1597 aa17.84■□□□□ 0.45
SNORD3C-201ENST00000580533 SYCP2Q9BX26 1530 aa17.84■□□□□ 0.45
SNORD3C-201ENST00000580533 ZNF518AQ6AHZ1 1483 aa17.84■□□□□ 0.45
SNORD3C-201ENST00000580533 CCDC141Q6ZP82 1450 aa17.83■□□□□ 0.45
SNORD3C-201ENST00000580533 POGZQ7Z3K3 1410 aa17.82■□□□□ 0.44
SNORD3C-201ENST00000580533 ZNF644Q9H582 1327 aaPredicted RBP17.82■□□□□ 0.44
SNORD3C-201ENST00000580533 TSPY4P0CV99 314 aa17.82■□□□□ 0.44
SNORD3C-201ENST00000580533 TSPY10P0CW01 314 aa17.82■□□□□ 0.44
SNORD3C-201ENST00000580533 HNRNPMP52272 730 aaKnown RBP eCLIP17.8■□□□□ 0.44
SNORD3C-201ENST00000580533 KDM6BO15054 1643 aa17.8■□□□□ 0.44
SNORD3C-201ENST00000580533 MBD5Q9P267 1494 aa17.79■□□□□ 0.44
SNORD3C-201ENST00000580533 SHANK2Q9UPX8 1470 aa17.79■□□□□ 0.44
SNORD3C-201ENST00000580533 DNMT1P26358 1616 aaKnown RBP17.79■□□□□ 0.44
SNORD3C-201ENST00000580533 DAPK1P53355 1430 aa17.78■□□□□ 0.44
SNORD3C-201ENST00000580533 MAGI2Q86UL8 1455 aa17.76■□□□□ 0.43
SNORD3C-201ENST00000580533 TRIM26Q12899 539 aaPredicted RBP17.76■□□□□ 0.43
SNORD3C-201ENST00000580533 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
SNORD3C-201ENST00000580533 ARHGEF12Q9NZN5 1544 aa17.76■□□□□ 0.43
SNORD3C-201ENST00000580533 SPAG9O60271 1321 aaKnown RBP17.75■□□□□ 0.43
SNORD3C-201ENST00000580533 KDM5CP41229 1560 aa17.75■□□□□ 0.43
SNORD3C-201ENST00000580533 TRAPPC8Q9Y2L5 1435 aa17.75■□□□□ 0.43
SNORD3C-201ENST00000580533 RTEL1-TNFRSF6BF6WH68 1400 aa17.74■□□□□ 0.43
SNORD3C-201ENST00000580533 ZMYM4Q5VZL5 1548 aa17.74■□□□□ 0.43
SNORD3C-201ENST00000580533 RICTORQ6R327 1708 aa17.74■□□□□ 0.43
SNORD3C-201ENST00000580533 CROCC2H7BZ55 1655 aa17.74■□□□□ 0.43
SNORD3C-201ENST00000580533 ABCC5O15440 1437 aa17.73■□□□□ 0.43
SNORD3C-201ENST00000580533 C9orf84Q5VXU9 1444 aa17.73■□□□□ 0.43
SNORD3C-201ENST00000580533 RAPGEF3O95398 923 aa17.73■□□□□ 0.43
SNORD3C-201ENST00000580533 AFAP1Q8N556 730 aa17.73■□□□□ 0.43
SNORD3C-201ENST00000580533 MLH3Q9UHC1 1453 aa17.73■□□□□ 0.43
SNORD3C-201ENST00000580533 HECW2Q9P2P5 1572 aa17.73■□□□□ 0.43
SNORD3C-201ENST00000580533 MAST1Q9Y2H9 1570 aa17.73■□□□□ 0.43
SNORD3C-201ENST00000580533 ANKRD30AQ9BXX3 1397 aa17.71■□□□□ 0.43
SNORD3C-201ENST00000580533 ITGAEP38570 1179 aa17.71■□□□□ 0.43
SNORD3C-201ENST00000580533 ATP7AQ04656 1500 aa17.7■□□□□ 0.42
SNORD3C-201ENST00000580533 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
SNORD3C-201ENST00000580533 ROCK1Q13464 1354 aa17.69■□□□□ 0.42
SNORD3C-201ENST00000580533 INO80Q9ULG1 1556 aaPredicted RBP17.69■□□□□ 0.42
SNORD3C-201ENST00000580533 ZFYVE16Q7Z3T8 1539 aa17.68■□□□□ 0.42
SNORD3C-201ENST00000580533 ADGBQ8N7X0 1667 aa17.68■□□□□ 0.42
SNORD3C-201ENST00000580533 ADGRL2O95490 1459 aa17.68■□□□□ 0.42
SNORD3C-201ENST00000580533 COL17A1Q9UMD9 1497 aaPredicted RBP17.68■□□□□ 0.42
SNORD3C-201ENST00000580533 PLXNC1O60486 1568 aa17.67■□□□□ 0.42
SNORD3C-201ENST00000580533 CHIC2Q9UKJ5 165 aa17.64■□□□□ 0.41
SNORD3C-201ENST00000580533 ARHGEF40Q8TER5 1519 aa17.63■□□□□ 0.41
SNORD3C-201ENST00000580533 ACIN1Q9UKV3 1341 aaKnown RBP17.63■□□□□ 0.41
SNORD3C-201ENST00000580533 NCOA1Q15788 1441 aa17.63■□□□□ 0.41
SNORD3C-201ENST00000580533 KIDINS220Q9ULH0 1771 aa17.62■□□□□ 0.41
SNORD3C-201ENST00000580533 KIF15Q9NS87 1388 aa17.62■□□□□ 0.41
SNORD3C-201ENST00000580533 DUOX2Q9NRD8 1548 aa17.62■□□□□ 0.41
SNORD3C-201ENST00000580533 PTPRKQ15262 1439 aa17.61■□□□□ 0.41
SNORD3C-201ENST00000580533 ATP10AO60312 1499 aa17.61■□□□□ 0.41
SNORD3C-201ENST00000580533 REREQ9P2R6 1566 aa17.59■□□□□ 0.41
SNORD3C-201ENST00000580533 DIP2CQ9Y2E4 1556 aa17.59■□□□□ 0.41
SNORD3C-201ENST00000580533 HFM1A2PYH4 1435 aa17.59■□□□□ 0.41
SNORD3C-201ENST00000580533 ERBINQ96RT1 1412 aa17.59■□□□□ 0.41
SNORD3C-201ENST00000580533 RRP7BPQ9NSQ0 103 aa17.59■□□□□ 0.41
SNORD3C-201ENST00000580533 ABCA6Q8N139 1617 aa17.58■□□□□ 0.41
SNORD3C-201ENST00000580533 A2MP01023 1474 aa17.58■□□□□ 0.41
SNORD3C-201ENST00000580533 DHX29Q7Z478 1369 aaKnown RBP17.58■□□□□ 0.4
SNORD3C-201ENST00000580533 YEATS2Q9ULM3 1422 aa17.57■□□□□ 0.4
SNORD3C-201ENST00000580533 ANKRD50Q9ULJ7 1429 aa17.55■□□□□ 0.4
SNORD3C-201ENST00000580533 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
SNORD3C-201ENST00000580533 EIF2AK4Q9P2K8 1649 aaKnown RBP17.54■□□□□ 0.4
SNORD3C-201ENST00000580533 NAIPQ13075 1403 aa17.53■□□□□ 0.4
SNORD3C-201ENST00000580533 SETD5Q9C0A6 1442 aa17.53■□□□□ 0.4
SNORD3C-201ENST00000580533 AGLP35573 1532 aa17.52■□□□□ 0.4
SNORD3C-201ENST00000580533 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
SNORD3C-201ENST00000580533 ARID4BQ4LE39 1312 aaPredicted RBP17.5■□□□□ 0.39
SNORD3C-201ENST00000580533 HRCP23327 699 aa17.49■□□□□ 0.39
SNORD3C-201ENST00000580533 BCORL1Q5H9F3 1711 aa17.48■□□□□ 0.39
SNORD3C-201ENST00000580533 KIF3BO15066 747 aa17.47■□□□□ 0.39
SNORD3C-201ENST00000580533 PPP6R1Q9UPN7 881 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms