RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 RANGAP1P46060 587 aaPredicted RBP10.69□□□□□ -0.7
PRPF8-204ENST00000572445 KLHL34Q8N239 644 aa10.68□□□□□ -0.7
PRPF8-204ENST00000572445 GLI2P10070 1586 aa10.68□□□□□ -0.7
PRPF8-204ENST00000572445 UHRF1BP1LA0JNW5 1464 aa10.68□□□□□ -0.7
PRPF8-204ENST00000572445 P3H3Q8IVL6 736 aa10.66□□□□□ -0.7
PRPF8-204ENST00000572445 WDR7Q9Y4E6 1490 aa10.66□□□□□ -0.7
PRPF8-204ENST00000572445 KDM5BQ9UGL1 1544 aa10.65□□□□□ -0.7
PRPF8-204ENST00000572445 KCNH8Q96L42 1107 aa10.65□□□□□ -0.7
PRPF8-204ENST00000572445 COL17A1Q9UMD9 1497 aaPredicted RBP10.65□□□□□ -0.7
PRPF8-204ENST00000572445 KIF21BO75037 1637 aa10.65□□□□□ -0.7
PRPF8-204ENST00000572445 TEX14Q8IWB6 1497 aa10.63□□□□□ -0.71
PRPF8-204ENST00000572445 SPRYD3Q8NCJ5 442 aa10.63□□□□□ -0.71
PRPF8-204ENST00000572445 ABCA8O94911 1581 aa10.62□□□□□ -0.71
PRPF8-204ENST00000572445 CFAP43Q8NDM7 1665 aa10.62□□□□□ -0.71
PRPF8-204ENST00000572445 GOLGA3Q08378 1498 aa10.61□□□□□ -0.71
PRPF8-204ENST00000572445 FAM9AQ8IZU1 332 aaPredicted RBP10.6□□□□□ -0.71
PRPF8-204ENST00000572445 HECW2Q9P2P5 1572 aa10.6□□□□□ -0.71
PRPF8-204ENST00000572445 ILDR1Q86SU0 546 aaPredicted RBP10.58□□□□□ -0.72
PRPF8-204ENST00000572445 CD109Q6YHK3 1445 aa10.58□□□□□ -0.72
PRPF8-204ENST00000572445 PRXQ9BXM0 1461 aa10.57□□□□□ -0.72
PRPF8-204ENST00000572445 RAPGEF6Q8TEU7 1601 aa10.56□□□□□ -0.72
PRPF8-204ENST00000572445 TIMELESSQ9UNS1 1208 aa10.56□□□□□ -0.72
PRPF8-204ENST00000572445 FHOD3Q2V2M9 1422 aa10.54□□□□□ -0.72
PRPF8-204ENST00000572445 SAMD9Q5K651 1589 aa10.54□□□□□ -0.72
PRPF8-204ENST00000572445 CHGAP10645 457 aaKnown RBP10.53□□□□□ -0.72
PRPF8-204ENST00000572445 CAPN15O75808 1086 aa10.52□□□□□ -0.73
PRPF8-204ENST00000572445 MAGI3Q5TCQ9 1506 aa10.52□□□□□ -0.73
PRPF8-204ENST00000572445 ABCA9Q8IUA7 1624 aa10.51□□□□□ -0.73
PRPF8-204ENST00000572445 ATP10BO94823 1461 aa10.5□□□□□ -0.73
PRPF8-204ENST00000572445 PLCD3Q8N3E9 789 aa10.5□□□□□ -0.73
PRPF8-204ENST00000572445 FRMPD1Q5SYB0 1578 aa10.48□□□□□ -0.73
PRPF8-204ENST00000572445 NBR1Q14596 966 aa10.48□□□□□ -0.73
PRPF8-204ENST00000572445 TTC37Q6PGP7 1564 aa10.48□□□□□ -0.73
PRPF8-204ENST00000572445 MADDQ8WXG6 1647 aa10.47□□□□□ -0.73
PRPF8-204ENST00000572445 RIMS1Q86UR5 1692 aaKnown RBP10.47□□□□□ -0.73
PRPF8-204ENST00000572445 TULP1O00294 542 aaPredicted RBP10.47□□□□□ -0.73
PRPF8-204ENST00000572445 ABCB7O75027 752 aa10.47□□□□□ -0.73
PRPF8-204ENST00000572445 RAPGEF3O95398 923 aa10.47□□□□□ -0.73
PRPF8-204ENST00000572445 STAG3Q9UJ98 1225 aa10.47□□□□□ -0.73
PRPF8-204ENST00000572445 ARID4BQ4LE39 1312 aaPredicted RBP10.47□□□□□ -0.73
PRPF8-204ENST00000572445 NUP153P49790 1475 aaKnown RBP10.47□□□□□ -0.73
PRPF8-204ENST00000572445 CDK13Q14004 1512 aaKnown RBP10.47□□□□□ -0.73
PRPF8-204ENST00000572445 ATP1B4Q9UN42 357 aaPredicted RBP10.45□□□□□ -0.74
PRPF8-204ENST00000572445 ZBTB12Q9Y330 459 aaPredicted RBP10.45□□□□□ -0.74
PRPF8-204ENST00000572445 CIZ1Q9ULV3 898 aaPredicted RBP10.44□□□□□ -0.74
PRPF8-204ENST00000572445 ARHGEF40Q8TER5 1519 aa10.43□□□□□ -0.74
PRPF8-204ENST00000572445 MIER1Q8N108 512 aa10.43□□□□□ -0.74
PRPF8-204ENST00000572445 BCORL1Q5H9F3 1711 aa10.43□□□□□ -0.74
PRPF8-204ENST00000572445 RICTORQ6R327 1708 aa10.43□□□□□ -0.74
PRPF8-204ENST00000572445 ARAP3Q8WWN8 1544 aa10.43□□□□□ -0.74
PRPF8-204ENST00000572445 ADAMTSL3P82987 1691 aa10.42□□□□□ -0.74
PRPF8-204ENST00000572445 ZNF692Q9BU19 519 aaPredicted RBP10.42□□□□□ -0.74
PRPF8-204ENST00000572445 SIGLEC1Q9BZZ2 1709 aa10.41□□□□□ -0.74
PRPF8-204ENST00000572445 CFAP74Q9C0B2 1584 aa10.4□□□□□ -0.74
PRPF8-204ENST00000572445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.4□□□□□ -0.74
PRPF8-204ENST00000572445 PTPRMP28827 1452 aa10.4□□□□□ -0.74
PRPF8-204ENST00000572445 FER1L4A9Z1Z3 1794 aa10.39□□□□□ -0.75
PRPF8-204ENST00000572445 EFCAB5A4FU69 1503 aa10.39□□□□□ -0.75
PRPF8-204ENST00000572445 FANCAO15360 1455 aa10.39□□□□□ -0.75
PRPF8-204ENST00000572445 NEO1Q92859 1461 aa10.39□□□□□ -0.75
PRPF8-204ENST00000572445 MLECQ14165 292 aa10.39□□□□□ -0.75
PRPF8-204ENST00000572445 HS6ST3Q8IZP7 471 aa10.39□□□□□ -0.75
PRPF8-204ENST00000572445 SSUH2Q9Y2M2 353 aa10.39□□□□□ -0.75
PRPF8-204ENST00000572445 KIF14Q15058 1648 aa10.39□□□□□ -0.75
PRPF8-204ENST00000572445 HECW1Q76N89 1606 aa10.39□□□□□ -0.75
PRPF8-204ENST00000572445 EEA1Q15075 1411 aa10.39□□□□□ -0.75
PRPF8-204ENST00000572445 MYO5CQ9NQX4 1742 aa10.38□□□□□ -0.75
PRPF8-204ENST00000572445 UBTFP17480 764 aaKnown RBP10.38□□□□□ -0.75
PRPF8-204ENST00000572445 RNF39Q9H2S5 420 aa10.38□□□□□ -0.75
PRPF8-204ENST00000572445 LRRIQ1Q96JM4 1722 aa10.38□□□□□ -0.75
PRPF8-204ENST00000572445 RNF25Q96BH1 459 aaPredicted RBP10.37□□□□□ -0.75
PRPF8-204ENST00000572445 ZFYVE16Q7Z3T8 1539 aa10.37□□□□□ -0.75
PRPF8-204ENST00000572445 DENND4BO75064 1496 aaPredicted RBP10.36□□□□□ -0.75
PRPF8-204ENST00000572445 YEATS2Q9ULM3 1422 aa10.36□□□□□ -0.75
PRPF8-204ENST00000572445 PLEKHD1A6NEE1 506 aa10.36□□□□□ -0.75
PRPF8-204ENST00000572445 GTF3C3Q9Y5Q9 886 aa10.36□□□□□ -0.75
PRPF8-204ENST00000572445 PCF11O94913 1555 aaKnown RBP10.35□□□□□ -0.75
PRPF8-204ENST00000572445 AKNAQ7Z591 1439 aa10.35□□□□□ -0.75
PRPF8-204ENST00000572445 HSPA2P54652 639 aa10.34□□□□□ -0.75
PRPF8-204ENST00000572445 NKX1-1Q15270 411 aaPredicted RBP10.34□□□□□ -0.75
PRPF8-204ENST00000572445 MYT1LQ9UL68 1186 aa10.34□□□□□ -0.75
PRPF8-204ENST00000572445 ARHGAP5Q13017 1502 aa10.32□□□□□ -0.76
PRPF8-204ENST00000572445 ZMYM4Q5VZL5 1548 aa10.32□□□□□ -0.76
PRPF8-204ENST00000572445 LMTK3Q96Q04 1460 aa10.31□□□□□ -0.76
PRPF8-204ENST00000572445 ARHGAP35Q9NRY4 1499 aa10.31□□□□□ -0.76
PRPF8-204ENST00000572445 POGZQ7Z3K3 1410 aa10.31□□□□□ -0.76
PRPF8-204ENST00000572445 PHLDB1Q86UU1 1377 aa10.3□□□□□ -0.76
PRPF8-204ENST00000572445 SPDYE2BA6NHP3 402 aa10.3□□□□□ -0.76
PRPF8-204ENST00000572445 SPDYE6P0CI01 402 aa10.3□□□□□ -0.76
PRPF8-204ENST00000572445 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
PRPF8-204ENST00000572445 SCAPERQ9BY12 1400 aa10.3□□□□□ -0.76
PRPF8-204ENST00000572445 CDC42BPBQ9Y5S2 1711 aa10.27□□□□□ -0.76
PRPF8-204ENST00000572445 FMN1Q68DA7 1419 aa10.27□□□□□ -0.77
PRPF8-204ENST00000572445 GTPBP6O43824 516 aaPredicted RBP10.27□□□□□ -0.77
PRPF8-204ENST00000572445 ABCA6Q8N139 1617 aa10.26□□□□□ -0.77
PRPF8-204ENST00000572445 ITSN2Q9NZM3 1697 aa10.26□□□□□ -0.77
PRPF8-204ENST00000572445 PREX2Q70Z35 1606 aa10.25□□□□□ -0.77
PRPF8-204ENST00000572445 CLIP1P30622 1438 aa10.25□□□□□ -0.77
PRPF8-204ENST00000572445 PREX1Q8TCU6 1659 aa10.25□□□□□ -0.77
PRPF8-204ENST00000572445 PLCH2O75038 1416 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms