RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 ADGRL1O94910 1474 aa11.83□□□□□ -0.52
SIN3A-207ENST00000566640 FXR2P51116 673 aaKnown RBP eCLIP11.82□□□□□ -0.524e-6■■■■□ 24.7
SIN3A-207ENST00000566640 CD109Q6YHK3 1445 aa11.82□□□□□ -0.52
SIN3A-207ENST00000566640 ATP10BO94823 1461 aa11.79□□□□□ -0.52
SIN3A-207ENST00000566640 KCNH8Q96L42 1107 aa11.78□□□□□ -0.52
SIN3A-207ENST00000566640 SAMD9Q5K651 1589 aa11.76□□□□□ -0.53
SIN3A-207ENST00000566640 CFAP43Q8NDM7 1665 aa11.76□□□□□ -0.53
SIN3A-207ENST00000566640 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
SIN3A-207ENST00000566640 EEA1Q15075 1411 aa11.75□□□□□ -0.53
SIN3A-207ENST00000566640 ARID3CA6NKF2 412 aa11.74□□□□□ -0.53
SIN3A-207ENST00000566640 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
SIN3A-207ENST00000566640 ARAP3Q8WWN8 1544 aa11.74□□□□□ -0.53
SIN3A-207ENST00000566640 LHX8Q68G74 356 aa11.73□□□□□ -0.53
SIN3A-207ENST00000566640 NUP153P49790 1475 aaKnown RBP11.71□□□□□ -0.53
SIN3A-207ENST00000566640 PHLDB1Q86UU1 1377 aa11.71□□□□□ -0.53
SIN3A-207ENST00000566640 PLSCR2Q9NRY7 297 aa11.71□□□□□ -0.53
SIN3A-207ENST00000566640 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
SIN3A-207ENST00000566640 ABCA9Q8IUA7 1624 aa11.7□□□□□ -0.54
SIN3A-207ENST00000566640 FHOD3Q2V2M9 1422 aa11.69□□□□□ -0.54
SIN3A-207ENST00000566640 RAPGEF6Q8TEU7 1601 aa11.69□□□□□ -0.54
SIN3A-207ENST00000566640 NEO1Q92859 1461 aa11.68□□□□□ -0.54
SIN3A-207ENST00000566640 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
SIN3A-207ENST00000566640 HECW2Q9P2P5 1572 aa11.66□□□□□ -0.54
SIN3A-207ENST00000566640 RAPGEF3O95398 923 aa11.65□□□□□ -0.54
SIN3A-207ENST00000566640 KIF21BO75037 1637 aa11.64□□□□□ -0.55
SIN3A-207ENST00000566640 FRMPD1Q5SYB0 1578 aa11.63□□□□□ -0.55
SIN3A-207ENST00000566640 EFCAB5A4FU69 1503 aa11.63□□□□□ -0.55
SIN3A-207ENST00000566640 RANGAP1P46060 587 aaPredicted RBP11.62□□□□□ -0.55
SIN3A-207ENST00000566640 PLEKHD1A6NEE1 506 aa11.61□□□□□ -0.55
SIN3A-207ENST00000566640 ILDR1Q86SU0 546 aaPredicted RBP11.61□□□□□ -0.55
SIN3A-207ENST00000566640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.6□□□□□ -0.55
SIN3A-207ENST00000566640 AKNAQ7Z591 1439 aa11.59□□□□□ -0.55
SIN3A-207ENST00000566640 ADAMTSL3P82987 1691 aa11.59□□□□□ -0.55
SIN3A-207ENST00000566640 FANCAO15360 1455 aa11.58□□□□□ -0.56
SIN3A-207ENST00000566640 DENND4BO75064 1496 aaPredicted RBP11.58□□□□□ -0.56
SIN3A-207ENST00000566640 PTPRMP28827 1452 aa11.58□□□□□ -0.56
SIN3A-207ENST00000566640 SPDYE2BA6NHP3 402 aa11.58□□□□□ -0.56
SIN3A-207ENST00000566640 SPDYE6P0CI01 402 aa11.58□□□□□ -0.56
SIN3A-207ENST00000566640 SPDYE2Q495Y8 402 aa11.58□□□□□ -0.56
SIN3A-207ENST00000566640 CDK13Q14004 1512 aaKnown RBP11.56□□□□□ -0.56
SIN3A-207ENST00000566640 ARHGEF40Q8TER5 1519 aa11.56□□□□□ -0.56
SIN3A-207ENST00000566640 TTC37Q6PGP7 1564 aa11.56□□□□□ -0.56
SIN3A-207ENST00000566640 ZNF692Q9BU19 519 aaPredicted RBP11.55□□□□□ -0.56
SIN3A-207ENST00000566640 ARHGAP35Q9NRY4 1499 aa11.55□□□□□ -0.56
SIN3A-207ENST00000566640 ZMYM4Q5VZL5 1548 aa11.55□□□□□ -0.56
SIN3A-207ENST00000566640 PLCH2O75038 1416 aa11.54□□□□□ -0.56
SIN3A-207ENST00000566640 FMN1Q68DA7 1419 aa11.54□□□□□ -0.56
SIN3A-207ENST00000566640 BCORL1Q5H9F3 1711 aa11.53□□□□□ -0.56
SIN3A-207ENST00000566640 YEATS2Q9ULM3 1422 aa11.52□□□□□ -0.56
SIN3A-207ENST00000566640 RICTORQ6R327 1708 aa11.52□□□□□ -0.56
SIN3A-207ENST00000566640 GABBR2O75899 941 aa11.52□□□□□ -0.57
SIN3A-207ENST00000566640 PROM2Q8N271 834 aa11.52□□□□□ -0.57
SIN3A-207ENST00000566640 CFAP74Q9C0B2 1584 aa11.52□□□□□ -0.57
SIN3A-207ENST00000566640 ARID4BQ4LE39 1312 aaPredicted RBP11.52□□□□□ -0.57
SIN3A-207ENST00000566640 POGZQ7Z3K3 1410 aa11.52□□□□□ -0.57
SIN3A-207ENST00000566640 MAGI2Q86UL8 1455 aa11.51□□□□□ -0.57
SIN3A-207ENST00000566640 MADDQ8WXG6 1647 aa11.51□□□□□ -0.57
SIN3A-207ENST00000566640 UBTFP17480 764 aaKnown RBP11.51□□□□□ -0.57
SIN3A-207ENST00000566640 LMTK3Q96Q04 1460 aa11.51□□□□□ -0.57
SIN3A-207ENST00000566640 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
SIN3A-207ENST00000566640 SCAPERQ9BY12 1400 aa11.5□□□□□ -0.57
SIN3A-207ENST00000566640 ZFYVE16Q7Z3T8 1539 aa11.5□□□□□ -0.57
SIN3A-207ENST00000566640 PCF11O94913 1555 aaKnown RBP11.49□□□□□ -0.57
SIN3A-207ENST00000566640 HECW1Q76N89 1606 aa11.49□□□□□ -0.57
SIN3A-207ENST00000566640 TROQ12816 1431 aaPredicted RBP11.48□□□□□ -0.57
SIN3A-207ENST00000566640 SIGLEC1Q9BZZ2 1709 aa11.47□□□□□ -0.57
SIN3A-207ENST00000566640 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
SIN3A-207ENST00000566640 EFCAB2Q5VUJ9 269 aa11.46□□□□□ -0.57
SIN3A-207ENST00000566640 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.57
SIN3A-207ENST00000566640 ATP1B4Q9UN42 357 aaPredicted RBP11.45□□□□□ -0.58
SIN3A-207ENST00000566640 KIF14Q15058 1648 aa11.44□□□□□ -0.58
SIN3A-207ENST00000566640 ATP10AO60312 1499 aa11.44□□□□□ -0.58
SIN3A-207ENST00000566640 C9orf84Q5VXU9 1444 aa11.43□□□□□ -0.58
SIN3A-207ENST00000566640 ARHGEF12Q9NZN5 1544 aa11.43□□□□□ -0.58
SIN3A-207ENST00000566640 ZNF518AQ6AHZ1 1483 aa11.43□□□□□ -0.58
SIN3A-207ENST00000566640 CLIP1P30622 1438 aa11.43□□□□□ -0.58
SIN3A-207ENST00000566640 CASKIN1Q8WXD9 1431 aa11.43□□□□□ -0.58
SIN3A-207ENST00000566640 RIMS1Q86UR5 1692 aaKnown RBP11.43□□□□□ -0.58
SIN3A-207ENST00000566640 KDM5CP41229 1560 aa11.42□□□□□ -0.58
SIN3A-207ENST00000566640 FBXO41Q8TF61 875 aa11.42□□□□□ -0.58
SIN3A-207ENST00000566640 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
SIN3A-207ENST00000566640 AFAP1Q8N556 730 aa11.41□□□□□ -0.58
SIN3A-207ENST00000566640 ARHGAP5Q13017 1502 aa11.4□□□□□ -0.58
SIN3A-207ENST00000566640 CCDC18Q5T9S5 1454 aa11.4□□□□□ -0.58
SIN3A-207ENST00000566640 HSPA2P54652 639 aa11.4□□□□□ -0.58
SIN3A-207ENST00000566640 MLECQ14165 292 aa11.4□□□□□ -0.58
SIN3A-207ENST00000566640 MYO5CQ9NQX4 1742 aa11.39□□□□□ -0.59
SIN3A-207ENST00000566640 MLH3Q9UHC1 1453 aa11.38□□□□□ -0.59
SIN3A-207ENST00000566640 LRRIQ1Q96JM4 1722 aa11.38□□□□□ -0.59
SIN3A-207ENST00000566640 REREQ9P2R6 1566 aa11.37□□□□□ -0.59
SIN3A-207ENST00000566640 TRAPPC8Q9Y2L5 1435 aa11.37□□□□□ -0.59
SIN3A-207ENST00000566640 ABCC1P33527 1531 aa11.37□□□□□ -0.59
SIN3A-207ENST00000566640 FYCO1Q9BQS8 1478 aa11.37□□□□□ -0.59
SIN3A-207ENST00000566640 DIP2CQ9Y2E4 1556 aa11.37□□□□□ -0.59
SIN3A-207ENST00000566640 PREX2Q70Z35 1606 aa11.35□□□□□ -0.59
SIN3A-207ENST00000566640 AGLP35573 1532 aa11.35□□□□□ -0.59
SIN3A-207ENST00000566640 CEBPAP49715 358 aaPredicted RBP11.34□□□□□ -0.59
SIN3A-207ENST00000566640 FER1L4A9Z1Z3 1794 aa11.33□□□□□ -0.59
SIN3A-207ENST00000566640 CDC42BPBQ9Y5S2 1711 aa11.33□□□□□ -0.6
SIN3A-207ENST00000566640 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms