RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 STK24Q9Y6E0 443 aa15.94■□□□□ 0.14
CFDP1-206ENST00000566254 PIP4P2Q8N4L2 257 aa15.92■□□□□ 0.14
CFDP1-206ENST00000566254 BCANQ96GW7 911 aa15.92■□□□□ 0.14
CFDP1-206ENST00000566254 CCDC61Q9Y6R9 512 aa15.92■□□□□ 0.14
CFDP1-206ENST00000566254 ZNF467Q7Z7K2 595 aaPredicted RBP15.91■□□□□ 0.14
CFDP1-206ENST00000566254 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
CFDP1-206ENST00000566254 PBRM1Q86U86 1689 aa15.89■□□□□ 0.13
CFDP1-206ENST00000566254 PCDHB8Q9UN66 801 aa15.84■□□□□ 0.13
CFDP1-206ENST00000566254 PCDHB13Q9Y5F0 798 aa15.84■□□□□ 0.13
CFDP1-206ENST00000566254 PAK3O75914 559 aaPredicted RBP15.82■□□□□ 0.12
CFDP1-206ENST00000566254 PDAP1Q13442 181 aaKnown RBP15.82■□□□□ 0.12
CFDP1-206ENST00000566254 GRIN2AQ12879 1464 aa15.82■□□□□ 0.12
CFDP1-206ENST00000566254 ABCA5Q8WWZ7 1642 aa15.82■□□□□ 0.12
CFDP1-206ENST00000566254 CEP170Q5SW79 1584 aa15.81■□□□□ 0.12
CFDP1-206ENST00000566254 ABCA10Q8WWZ4 1543 aa15.8■□□□□ 0.12
CFDP1-206ENST00000566254 ZNF579Q8NAF0 562 aaKnown RBP15.8■□□□□ 0.12
CFDP1-206ENST00000566254 RYDENQ9NUL5 291 aaKnown RBP15.79■□□□□ 0.12
CFDP1-206ENST00000566254 NUP160Q12769 1436 aa15.77■□□□□ 0.12
CFDP1-206ENST00000566254 KIF13AQ9H1H9 1805 aa15.75■□□□□ 0.11
CFDP1-206ENST00000566254 ADAMTS12P58397 1594 aa15.74■□□□□ 0.11
CFDP1-206ENST00000566254 PSEN1P49768 467 aa15.73■□□□□ 0.11
CFDP1-206ENST00000566254 SHROOM2Q13796 1616 aa15.72■□□□□ 0.11
CFDP1-206ENST00000566254 KIF12Q96FN5 646 aa15.72■□□□□ 0.11
CFDP1-206ENST00000566254 MAP3K13O43283 966 aa15.71■□□□□ 0.11
CFDP1-206ENST00000566254 IFNL1Q8IU54 200 aa15.71■□□□□ 0.11
CFDP1-206ENST00000566254 FAM69CQ0P6D2 419 aa15.69■□□□□ 0.1
CFDP1-206ENST00000566254 FHAD1B1AJZ9 1412 aa15.68■□□□□ 0.1
CFDP1-206ENST00000566254 PRG4Q92954 1404 aaPredicted RBP15.68■□□□□ 0.1
CFDP1-206ENST00000566254 KDM4FA0A1W2PPD8 638 aa15.67■□□□□ 0.1
CFDP1-206ENST00000566254 WRNQ14191 1432 aaPredicted RBP eCLIP15.67■□□□□ 0.1
CFDP1-206ENST00000566254 ILDR1Q86SU0 546 aaPredicted RBP15.66■□□□□ 0.1
CFDP1-206ENST00000566254 ZRANB1Q9UGI0 708 aa15.66■□□□□ 0.1
CFDP1-206ENST00000566254 ABCC10Q5T3U5 1492 aa15.65■□□□□ 0.1
CFDP1-206ENST00000566254 CD44P16070 742 aaKnown RBP15.65■□□□□ 0.1
CFDP1-206ENST00000566254 JPH4Q96JJ6 628 aa15.62■□□□□ 0.09
CFDP1-206ENST00000566254 DIP2BQ9P265 1576 aa15.6■□□□□ 0.09
CFDP1-206ENST00000566254 PHF12Q96QT6 1004 aa15.59■□□□□ 0.09
CFDP1-206ENST00000566254 MFRPQ9BY79 579 aa15.59■□□□□ 0.09
CFDP1-206ENST00000566254 MAPKBP1O60336 1514 aa15.58■□□□□ 0.09
CFDP1-206ENST00000566254 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.09
CFDP1-206ENST00000566254 KDM6BO15054 1643 aa15.58■□□□□ 0.09
CFDP1-206ENST00000566254 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
CFDP1-206ENST00000566254 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
CFDP1-206ENST00000566254 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
CFDP1-206ENST00000566254 CABP2Q9NPB3 220 aa15.53■□□□□ 0.08
CFDP1-206ENST00000566254 BIVM-ERCC5R4GMW8 1640 aa15.53■□□□□ 0.08
CFDP1-206ENST00000566254 EFCAB3Q8N7B9 438 aa15.52■□□□□ 0.08
CFDP1-206ENST00000566254 C19orf67A6NJJ6 358 aa15.5■□□□□ 0.07
CFDP1-206ENST00000566254 PRKCSHP14314 528 aaPredicted RBP15.5■□□□□ 0.07
CFDP1-206ENST00000566254 NBR1Q14596 966 aa15.5■□□□□ 0.07
CFDP1-206ENST00000566254 TSPOAP1O95153 1857 aa15.5■□□□□ 0.07
CFDP1-206ENST00000566254 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
CFDP1-206ENST00000566254 SOX12O15370 315 aa15.49■□□□□ 0.07
CFDP1-206ENST00000566254 CADPS2Q86UW7 1296 aa15.48■□□□□ 0.07
CFDP1-206ENST00000566254 FBXO22Q8NEZ5 403 aa15.47■□□□□ 0.07
CFDP1-206ENST00000566254 NLRP6P59044 892 aa15.46■□□□□ 0.07
CFDP1-206ENST00000566254 PHF8Q9UPP1 1060 aa15.44■□□□□ 0.06
CFDP1-206ENST00000566254 PPP1R37O75864 691 aa15.43■□□□□ 0.06
CFDP1-206ENST00000566254 ADGRL1O94910 1474 aa15.42■□□□□ 0.06
CFDP1-206ENST00000566254 MS4A3Q96HJ5 214 aa15.42■□□□□ 0.06
CFDP1-206ENST00000566254 KIAA0586Q9BVV6 1533 aa15.4■□□□□ 0.06
CFDP1-206ENST00000566254 TPRNQ4KMQ1 711 aa15.4■□□□□ 0.06
CFDP1-206ENST00000566254 TTBK1Q5TCY1 1321 aaPredicted RBP15.4■□□□□ 0.06
CFDP1-206ENST00000566254 TMEM106CQ9BVX2 250 aa15.39■□□□□ 0.05
CFDP1-206ENST00000566254 TRPC6Q9Y210 931 aa15.39■□□□□ 0.05
CFDP1-206ENST00000566254 PTPRGP23470 1445 aa15.36■□□□□ 0.05
CFDP1-206ENST00000566254 HECW2Q9P2P5 1572 aa15.35■□□□□ 0.05
CFDP1-206ENST00000566254 PPRC1Q5VV67 1664 aaKnown RBP15.35■□□□□ 0.05
CFDP1-206ENST00000566254 ASXL2Q76L83 1435 aa15.34■□□□□ 0.05
CFDP1-206ENST00000566254 WDR70Q9NW82 654 aa15.34■□□□□ 0.05
CFDP1-206ENST00000566254 ABCC2Q92887 1545 aa15.33■□□□□ 0.05
CFDP1-206ENST00000566254 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.04
CFDP1-206ENST00000566254 P3H3Q8IVL6 736 aa15.32■□□□□ 0.04
CFDP1-206ENST00000566254 MS4A4AQ96JQ5 239 aa15.32■□□□□ 0.04
CFDP1-206ENST00000566254 GOLGA2Q08379 1002 aa15.31■□□□□ 0.04
CFDP1-206ENST00000566254 IGF1RP08069 1367 aa15.31■□□□□ 0.04
CFDP1-206ENST00000566254 PLB1Q6P1J6 1458 aa15.31■□□□□ 0.04
CFDP1-206ENST00000566254 GLI2P10070 1586 aa15.31■□□□□ 0.04
CFDP1-206ENST00000566254 TIE1P35590 1138 aa15.29■□□□□ 0.04
CFDP1-206ENST00000566254 TNIKQ9UKE5 1360 aa15.28■□□□□ 0.04
CFDP1-206ENST00000566254 KCNV2Q8TDN2 545 aa15.26■□□□□ 0.03
CFDP1-206ENST00000566254 CARMIL2Q6F5E8 1435 aa15.26■□□□□ 0.03
CFDP1-206ENST00000566254 CUL7Q14999 1698 aa15.25■□□□□ 0.03
CFDP1-206ENST00000566254 TTLL13PA6NNM8 815 aa15.25■□□□□ 0.03
CFDP1-206ENST00000566254 MKRN3Q13064 507 aaKnown RBP15.25■□□□□ 0.03
CFDP1-206ENST00000566254 EPRSP07814 1512 aaKnown RBP15.24■□□□□ 0.03
CFDP1-206ENST00000566254 KIF27Q86VH2 1401 aa15.24■□□□□ 0.03
CFDP1-206ENST00000566254 UHRF1BP1LA0JNW5 1464 aa15.23■□□□□ 0.03
CFDP1-206ENST00000566254 BMP2KQ9NSY1 1161 aaPredicted RBP15.22■□□□□ 0.03
CFDP1-206ENST00000566254 UACAQ9BZF9 1416 aa15.22■□□□□ 0.03
CFDP1-206ENST00000566254 MAP3K4Q9Y6R4 1608 aa15.21■□□□□ 0.03
CFDP1-206ENST00000566254 HAX1O00165 279 aa15.21■□□□□ 0.03
CFDP1-206ENST00000566254 GALR2O43603 387 aaPredicted RBP15.21■□□□□ 0.03
CFDP1-206ENST00000566254 TEX14Q8IWB6 1497 aa15.2■□□□□ 0.02
CFDP1-206ENST00000566254 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
CFDP1-206ENST00000566254 EVX2Q03828 476 aa15.18■□□□□ 0.02
CFDP1-206ENST00000566254 IQGAP2Q13576 1575 aa15.18■□□□□ 0.02
CFDP1-206ENST00000566254 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
CFDP1-206ENST00000566254 KDM5BQ9UGL1 1544 aa15.17■□□□□ 0.02
CFDP1-206ENST00000566254 DISP1Q96F81 1524 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms