RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 PLB1Q6P1J6 1458 aa9.37□□□□□ -0.91
CHD9-217ENST00000565832 SSUH2Q9Y2M2 353 aa9.37□□□□□ -0.91
CHD9-217ENST00000565832 CFAP43Q8NDM7 1665 aa9.37□□□□□ -0.91
CHD9-217ENST00000565832 MAGI3Q5TCQ9 1506 aa9.37□□□□□ -0.91
CHD9-217ENST00000565832 PRG4Q92954 1404 aaPredicted RBP9.36□□□□□ -0.91
CHD9-217ENST00000565832 RRBP1Q9P2E9 1410 aaKnown RBP9.36□□□□□ -0.91
CHD9-217ENST00000565832 EPRSP07814 1512 aaKnown RBP9.36□□□□□ -0.91
CHD9-217ENST00000565832 CARMIL2Q6F5E8 1435 aa9.35□□□□□ -0.91
CHD9-217ENST00000565832 NUP153P49790 1475 aaKnown RBP9.33□□□□□ -0.92
CHD9-217ENST00000565832 ERCC6L2Q5T890 1561 aa9.33□□□□□ -0.92
CHD9-217ENST00000565832 CACNB1Q02641 598 aaPredicted RBP9.32□□□□□ -0.92
CHD9-217ENST00000565832 HECW1Q76N89 1606 aa9.31□□□□□ -0.92
CHD9-217ENST00000565832 NCOA2Q15596 1464 aa9.31□□□□□ -0.92
CHD9-217ENST00000565832 PTPRGP23470 1445 aa9.31□□□□□ -0.92
CHD9-217ENST00000565832 RAPGEF6Q8TEU7 1601 aa9.31□□□□□ -0.92
CHD9-217ENST00000565832 PKD2Q13563 968 aa9.31□□□□□ -0.92
CHD9-217ENST00000565832 CCDC18Q5T9S5 1454 aa9.29□□□□□ -0.92
CHD9-217ENST00000565832 KLHL34Q8N239 644 aa9.29□□□□□ -0.92
CHD9-217ENST00000565832 STAG3Q9UJ98 1225 aa9.29□□□□□ -0.92
CHD9-217ENST00000565832 ZEB1P37275 1124 aaPredicted RBP9.29□□□□□ -0.92
CHD9-217ENST00000565832 ZNF644Q9H582 1327 aaPredicted RBP9.28□□□□□ -0.92
CHD9-217ENST00000565832 FGD6Q6ZV73 1430 aa9.28□□□□□ -0.92
CHD9-217ENST00000565832 ATP10BO94823 1461 aa9.27□□□□□ -0.93
CHD9-217ENST00000565832 CDK11AQ9UQ88 783 aaPredicted RBP9.27□□□□□ -0.93
CHD9-217ENST00000565832 SUPT6HQ7KZ85 1726 aaKnown RBP9.26□□□□□ -0.93
CHD9-217ENST00000565832 PTPRKQ15262 1439 aa9.26□□□□□ -0.93
CHD9-217ENST00000565832 MYOM3Q5VTT5 1437 aa9.26□□□□□ -0.93
CHD9-217ENST00000565832 CHIC2Q9UKJ5 165 aa9.26□□□□□ -0.93
CHD9-217ENST00000565832 EHBP1L1Q8N3D4 1523 aa9.26□□□□□ -0.93
CHD9-217ENST00000565832 PLEKHD1A6NEE1 506 aa9.26□□□□□ -0.93
CHD9-217ENST00000565832 SHROOM2Q13796 1616 aa9.25□□□□□ -0.93
CHD9-217ENST00000565832 PLCD3Q8N3E9 789 aa9.25□□□□□ -0.93
CHD9-217ENST00000565832 SPOCK2Q92563 424 aa9.25□□□□□ -0.93
CHD9-217ENST00000565832 ABCA8O94911 1581 aa9.25□□□□□ -0.93
CHD9-217ENST00000565832 CLASP1Q7Z460 1538 aa9.25□□□□□ -0.93
CHD9-217ENST00000565832 ARHGEF11O15085 1522 aa9.24□□□□□ -0.93
CHD9-217ENST00000565832 RAB3GAP2Q9H2M9 1393 aa9.24□□□□□ -0.93
CHD9-217ENST00000565832 ZNF777Q9ULD5 760 aaPredicted RBP9.24□□□□□ -0.93
CHD9-217ENST00000565832 KCNH8Q96L42 1107 aa9.23□□□□□ -0.93
CHD9-217ENST00000565832 UACAQ9BZF9 1416 aa9.23□□□□□ -0.93
CHD9-217ENST00000565832 MIER1Q8N108 512 aa9.22□□□□□ -0.93
CHD9-217ENST00000565832 RRP7BPQ9NSQ0 103 aa9.22□□□□□ -0.93
CHD9-217ENST00000565832 DHX57Q6P158 1386 aaKnown RBP9.22□□□□□ -0.93
CHD9-217ENST00000565832 KIF14Q15058 1648 aa9.22□□□□□ -0.93
CHD9-217ENST00000565832 TROQ12816 1431 aaPredicted RBP9.22□□□□□ -0.93
CHD9-217ENST00000565832 PTPN23Q9H3S7 1636 aa9.21□□□□□ -0.93
CHD9-217ENST00000565832 SETD5Q9C0A6 1442 aa9.21□□□□□ -0.94
CHD9-217ENST00000565832 CFDP1Q9UEE9 299 aaPredicted RBP9.21□□□□□ -0.94
CHD9-217ENST00000565832 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.2□□□□□ -0.943e-10■■■■■ 27.7
CHD9-217ENST00000565832 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
CHD9-217ENST00000565832 GPATCH8Q9UKJ3 1502 aaKnown RBP9.18□□□□□ -0.94
CHD9-217ENST00000565832 MIA2Q96PC5 1412 aa9.17□□□□□ -0.94
CHD9-217ENST00000565832 ECM2O94769 699 aaPredicted RBP9.16□□□□□ -0.94
CHD9-217ENST00000565832 TCOF1Q13428 1488 aaKnown RBP9.16□□□□□ -0.94
CHD9-217ENST00000565832 HNRNPMP52272 730 aaKnown RBP eCLIP9.15□□□□□ -0.941e-6■■■■□ 24.8
CHD9-217ENST00000565832 SIN3AQ96ST3 1273 aa9.15□□□□□ -0.94
CHD9-217ENST00000565832 ABCC2Q92887 1545 aa9.15□□□□□ -0.94
CHD9-217ENST00000565832 NAIPQ13075 1403 aa9.15□□□□□ -0.95
CHD9-217ENST00000565832 ABCC5O15440 1437 aa9.14□□□□□ -0.95
CHD9-217ENST00000565832 ABCC10Q5T3U5 1492 aa9.14□□□□□ -0.95
CHD9-217ENST00000565832 NEUROD1Q13562 356 aa9.14□□□□□ -0.95
CHD9-217ENST00000565832 HFM1A2PYH4 1435 aa9.13□□□□□ -0.95
CHD9-217ENST00000565832 CDC42BPAQ5VT25 1732 aa9.12□□□□□ -0.95
CHD9-217ENST00000565832 DAPK1P53355 1430 aa9.12□□□□□ -0.95
CHD9-217ENST00000565832 CAMSAP2Q08AD1 1489 aa9.12□□□□□ -0.95
CHD9-217ENST00000565832 KDM6BO15054 1643 aa9.12□□□□□ -0.95
CHD9-217ENST00000565832 ADCY10Q96PN6 1610 aa9.12□□□□□ -0.95
CHD9-217ENST00000565832 ZCCHC11Q5TAX3 1644 aaKnown RBP9.12□□□□□ -0.95
CHD9-217ENST00000565832 TRIM52Q96A61 297 aa9.12□□□□□ -0.95
CHD9-217ENST00000565832 MAPKBP1O60336 1514 aa9.11□□□□□ -0.95
CHD9-217ENST00000565832 KDM5BQ9UGL1 1544 aa9.11□□□□□ -0.95
CHD9-217ENST00000565832 CYB5RLQ6IPT4 315 aa9.1□□□□□ -0.95
CHD9-217ENST00000565832 PLEKHG5O94827 1062 aa9.1□□□□□ -0.95
CHD9-217ENST00000565832 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.1□□□□□ -0.952e-6■■■□□ 15.9
CHD9-217ENST00000565832 UHRF1BP1LA0JNW5 1464 aa9.1□□□□□ -0.95
CHD9-217ENST00000565832 TTC37Q6PGP7 1564 aa9.09□□□□□ -0.95
CHD9-217ENST00000565832 CDC42BPBQ9Y5S2 1711 aa9.09□□□□□ -0.95
CHD9-217ENST00000565832 CLSPNQ9HAW4 1339 aa9.08□□□□□ -0.96
CHD9-217ENST00000565832 RGL2O15211 777 aa9.08□□□□□ -0.96
CHD9-217ENST00000565832 ZBTB47Q9UFB7 747 aaPredicted RBP9.08□□□□□ -0.96
CHD9-217ENST00000565832 DNMT1P26358 1616 aaKnown RBP9.08□□□□□ -0.96
CHD9-217ENST00000565832 ITSN2Q9NZM3 1697 aa9.08□□□□□ -0.96
CHD9-217ENST00000565832 HAP1P54257 671 aaPredicted RBP9.07□□□□□ -0.96
CHD9-217ENST00000565832 TSPY4P0CV99 314 aa9.07□□□□□ -0.96
CHD9-217ENST00000565832 TSPY10P0CW01 314 aa9.07□□□□□ -0.96
CHD9-217ENST00000565832 NCOA1Q15788 1441 aa9.07□□□□□ -0.96
CHD9-217ENST00000565832 AKNAQ7Z591 1439 aa9.07□□□□□ -0.96
CHD9-217ENST00000565832 CIZ1Q9ULV3 898 aaPredicted RBP9.07□□□□□ -0.96
CHD9-217ENST00000565832 NPM1P06748 294 aaKnown RBP eCLIP9.06□□□□□ -0.96
CHD9-217ENST00000565832 MPHOSPH9Q99550 1183 aa9.06□□□□□ -0.96
CHD9-217ENST00000565832 MBD5Q9P267 1494 aa9.06□□□□□ -0.96
CHD9-217ENST00000565832 ARHGAP5Q13017 1502 aa9.05□□□□□ -0.96
CHD9-217ENST00000565832 ROCK1Q13464 1354 aa9.05□□□□□ -0.96
CHD9-217ENST00000565832 SAMD9LQ8IVG5 1584 aa9.05□□□□□ -0.96
CHD9-217ENST00000565832 ASXL2Q76L83 1435 aa9.05□□□□□ -0.96
CHD9-217ENST00000565832 DENND4BO75064 1496 aaPredicted RBP9.04□□□□□ -0.96
CHD9-217ENST00000565832 AFAP1Q8N556 730 aa9.04□□□□□ -0.96
CHD9-217ENST00000565832 EFCAB2Q5VUJ9 269 aa9.03□□□□□ -0.96
CHD9-217ENST00000565832 PREX2Q70Z35 1606 aa9.03□□□□□ -0.96
CHD9-217ENST00000565832 ARHGEF12Q9NZN5 1544 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms