RNA–Protein interactions for RNA: ENST00000554118.1

LRP1-206, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 418 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-206ENST00000554118 CLIP1P30622 1438 aa12.43□□□□□ -0.42
LRP1-206ENST00000554118 TTC37Q6PGP7 1564 aa12.42□□□□□ -0.42
LRP1-206ENST00000554118 ARID3CA6NKF2 412 aa12.41□□□□□ -0.42
LRP1-206ENST00000554118 TOM1O60784 492 aa12.41□□□□□ -0.42
LRP1-206ENST00000554118 FRMPD1Q5SYB0 1578 aa12.41□□□□□ -0.42
LRP1-206ENST00000554118 ARHGEF40Q8TER5 1519 aa12.41□□□□□ -0.42
LRP1-206ENST00000554118 DISP1Q96F81 1524 aa12.41□□□□□ -0.42
LRP1-206ENST00000554118 ARHGAP35Q9NRY4 1499 aa12.4□□□□□ -0.43
LRP1-206ENST00000554118 AKNAQ7Z591 1439 aa12.38□□□□□ -0.43
LRP1-206ENST00000554118 P3H3Q8IVL6 736 aa12.37□□□□□ -0.43
LRP1-206ENST00000554118 SIGLEC1Q9BZZ2 1709 aa12.37□□□□□ -0.43
LRP1-206ENST00000554118 NCKAP5LQ9HCH0 1330 aa12.37□□□□□ -0.43
LRP1-206ENST00000554118 POTEAQ6S8J7 498 aa12.36□□□□□ -0.43
LRP1-206ENST00000554118 FHOD3Q2V2M9 1422 aa12.36□□□□□ -0.43
LRP1-206ENST00000554118 NEO1Q92859 1461 aa12.34□□□□□ -0.43
LRP1-206ENST00000554118 NCOA1Q15788 1441 aa12.34□□□□□ -0.43
LRP1-206ENST00000554118 SETD1BQ9UPS6 1966 aaKnown RBP12.34□□□□□ -0.43
LRP1-206ENST00000554118 DENND4BO75064 1496 aaPredicted RBP12.32□□□□□ -0.44
LRP1-206ENST00000554118 FMN1Q68DA7 1419 aa12.31□□□□□ -0.44
LRP1-206ENST00000554118 SETD1AO15047 1707 aaKnown RBP12.3□□□□□ -0.44
LRP1-206ENST00000554118 ZFYVE16Q7Z3T8 1539 aa12.29□□□□□ -0.44
LRP1-206ENST00000554118 ARHGEF12Q9NZN5 1544 aa12.28□□□□□ -0.44
LRP1-206ENST00000554118 UPF1Q92900 1129 aaKnown RBP eCLIP12.28□□□□□ -0.44
LRP1-206ENST00000554118 RAPGEF6Q8TEU7 1601 aa12.27□□□□□ -0.44
LRP1-206ENST00000554118 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.45
LRP1-206ENST00000554118 CAMSAP1Q5T5Y3 1602 aa12.26□□□□□ -0.45
LRP1-206ENST00000554118 ABCA9Q8IUA7 1624 aa12.26□□□□□ -0.45
LRP1-206ENST00000554118 ABCA8O94911 1581 aa12.26□□□□□ -0.45
LRP1-206ENST00000554118 RICTORQ6R327 1708 aa12.25□□□□□ -0.45
LRP1-206ENST00000554118 HECW1Q76N89 1606 aa12.25□□□□□ -0.45
LRP1-206ENST00000554118 CASKIN1Q8WXD9 1431 aa12.24□□□□□ -0.45
LRP1-206ENST00000554118 FYCO1Q9BQS8 1478 aa12.24□□□□□ -0.45
LRP1-206ENST00000554118 SRCAPQ6ZRS2 3230 aa12.22□□□□□ -0.45
LRP1-206ENST00000554118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.22□□□□□ -0.45
LRP1-206ENST00000554118 HNRNPUL2Q1KMD3 747 aaKnown RBP12.22□□□□□ -0.45
LRP1-206ENST00000554118 ESF1Q9H501 851 aaKnown RBP12.22□□□□□ -0.45
LRP1-206ENST00000554118 ATP1B4Q9UN42 357 aaPredicted RBP12.22□□□□□ -0.45
LRP1-206ENST00000554118 PPP6R1Q9UPN7 881 aa12.22□□□□□ -0.45
LRP1-206ENST00000554118 TRAPPC8Q9Y2L5 1435 aa12.2□□□□□ -0.46
LRP1-206ENST00000554118 NUP153P49790 1475 aaKnown RBP12.2□□□□□ -0.46
LRP1-206ENST00000554118 PKD2Q13563 968 aa12.19□□□□□ -0.46
LRP1-206ENST00000554118 LRRIQ1Q96JM4 1722 aa12.18□□□□□ -0.46
LRP1-206ENST00000554118 ATP10AO60312 1499 aa12.18□□□□□ -0.46
LRP1-206ENST00000554118 CCDC18Q5T9S5 1454 aa12.18□□□□□ -0.46
LRP1-206ENST00000554118 C3P01024 1663 aa12.18□□□□□ -0.46
LRP1-206ENST00000554118 PTPRKQ15262 1439 aa12.18□□□□□ -0.46
LRP1-206ENST00000554118 ZMYM4Q5VZL5 1548 aa12.17□□□□□ -0.46
LRP1-206ENST00000554118 ATP10BO94823 1461 aa12.17□□□□□ -0.46
LRP1-206ENST00000554118 MAGI2Q86UL8 1455 aa12.17□□□□□ -0.46
LRP1-206ENST00000554118 C9orf84Q5VXU9 1444 aa12.17□□□□□ -0.46
LRP1-206ENST00000554118 MYT1LQ9UL68 1186 aa12.16□□□□□ -0.46
LRP1-206ENST00000554118 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
LRP1-206ENST00000554118 TRIM52Q96A61 297 aa12.15□□□□□ -0.46
LRP1-206ENST00000554118 APLP2Q06481 763 aa12.14□□□□□ -0.47
LRP1-206ENST00000554118 TIAM1Q13009 1591 aa12.13□□□□□ -0.47
LRP1-206ENST00000554118 MAP3K1Q13233 1512 aa12.12□□□□□ -0.47
LRP1-206ENST00000554118 CPS1P31327 1500 aa12.11□□□□□ -0.47
LRP1-206ENST00000554118 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
LRP1-206ENST00000554118 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
LRP1-206ENST00000554118 CDK11AQ9UQ88 783 aaPredicted RBP12.1□□□□□ -0.47
LRP1-206ENST00000554118 SHANK2Q9UPX8 1470 aa12.09□□□□□ -0.47
LRP1-206ENST00000554118 SCAPERQ9BY12 1400 aa12.08□□□□□ -0.48
LRP1-206ENST00000554118 MTUS2Q5JR59 1369 aa12.07□□□□□ -0.48
LRP1-206ENST00000554118 EHBP1L1Q8N3D4 1523 aa12.07□□□□□ -0.48
LRP1-206ENST00000554118 CFAP74Q9C0B2 1584 aa12.07□□□□□ -0.48
LRP1-206ENST00000554118 LRRC9Q6ZRR7 1453 aa12.07□□□□□ -0.48
LRP1-206ENST00000554118 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
LRP1-206ENST00000554118 TROQ12816 1431 aaPredicted RBP12.06□□□□□ -0.48
LRP1-206ENST00000554118 PLEKHD1A6NEE1 506 aa12.06□□□□□ -0.48
LRP1-206ENST00000554118 TCOF1Q13428 1488 aaKnown RBP12.06□□□□□ -0.48
LRP1-206ENST00000554118 RBM33Q96EV2 1170 aaKnown RBP12.05□□□□□ -0.48
LRP1-206ENST00000554118 PLA2R1Q13018 1463 aa12.05□□□□□ -0.48
LRP1-206ENST00000554118 KIF14Q15058 1648 aa12.04□□□□□ -0.48
LRP1-206ENST00000554118 KANK4Q5T7N3 995 aaPredicted RBP12.02□□□□□ -0.49
LRP1-206ENST00000554118 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
LRP1-206ENST00000554118 PPARGC1BQ86YN6 1023 aaKnown RBP12□□□□□ -0.49
LRP1-206ENST00000554118 NPATQ14207 1427 aa12□□□□□ -0.49
LRP1-206ENST00000554118 ZMYM3Q14202 1370 aa11.99□□□□□ -0.49
LRP1-206ENST00000554118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.98□□□□□ -0.49
LRP1-206ENST00000554118 NCOA2Q15596 1464 aa11.98□□□□□ -0.49
LRP1-206ENST00000554118 CNTLNQ9NXG0 1405 aa11.98□□□□□ -0.49
LRP1-206ENST00000554118 AFAP1Q8N556 730 aa11.98□□□□□ -0.49
LRP1-206ENST00000554118 CEP170BQ9Y4F5 1589 aaPredicted RBP11.96□□□□□ -0.49
LRP1-206ENST00000554118 RXRBP28702 533 aa11.96□□□□□ -0.49
LRP1-206ENST00000554118 MYO5CQ9NQX4 1742 aa11.96□□□□□ -0.49
LRP1-206ENST00000554118 ITSN2Q9NZM3 1697 aa11.96□□□□□ -0.5
LRP1-206ENST00000554118 SETBP1Q9Y6X0 1596 aa11.96□□□□□ -0.5
LRP1-206ENST00000554118 LRRC7Q96NW7 1537 aa11.96□□□□□ -0.5
LRP1-206ENST00000554118 FOXD1Q16676 465 aa11.95□□□□□ -0.5
LRP1-206ENST00000554118 MYO3AQ8NEV4 1616 aa11.95□□□□□ -0.5
LRP1-206ENST00000554118 CCNB3Q8WWL7 1395 aa11.94□□□□□ -0.5
LRP1-206ENST00000554118 PREX2Q70Z35 1606 aa11.94□□□□□ -0.5
LRP1-206ENST00000554118 MEX3CQ5U5Q3 659 aaKnown RBP11.94□□□□□ -0.5
LRP1-206ENST00000554118 ZNF772Q68DY9 489 aaPredicted RBP11.94□□□□□ -0.5
LRP1-206ENST00000554118 CDC42BPAQ5VT25 1732 aa11.94□□□□□ -0.5
LRP1-206ENST00000554118 VWDEQ8N2E2 1590 aa11.93□□□□□ -0.5
LRP1-206ENST00000554118 AGLP35573 1532 aa11.93□□□□□ -0.5
LRP1-206ENST00000554118 ZNF142P52746 1687 aaPredicted RBP11.93□□□□□ -0.5
LRP1-206ENST00000554118 RNF17Q9BXT8 1623 aaKnown RBP11.93□□□□□ -0.5
LRP1-206ENST00000554118 MYOM3Q5VTT5 1437 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms