RNA–Protein interactions for RNA: ENST00000554118.1

LRP1-206, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 418 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-206ENST00000554118 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
LRP1-206ENST00000554118 ABCC9O60706 1549 aa17.66■□□□□ 0.42
LRP1-206ENST00000554118 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
LRP1-206ENST00000554118 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
LRP1-206ENST00000554118 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
LRP1-206ENST00000554118 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
LRP1-206ENST00000554118 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
LRP1-206ENST00000554118 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
LRP1-206ENST00000554118 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
LRP1-206ENST00000554118 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
LRP1-206ENST00000554118 CC2D2AQ9P2K1 1620 aa15.81■□□□□ 0.12
LRP1-206ENST00000554118 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
LRP1-206ENST00000554118 NACADO15069 1562 aa15.78■□□□□ 0.12
LRP1-206ENST00000554118 BICRAQ9NZM4 1560 aa15.74■□□□□ 0.11
LRP1-206ENST00000554118 CUX2O14529 1486 aa15.55■□□□□ 0.08
LRP1-206ENST00000554118 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
LRP1-206ENST00000554118 ERCC6Q03468 1493 aa15.33■□□□□ 0.04
LRP1-206ENST00000554118 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
LRP1-206ENST00000554118 ZCCHC6Q5VYS8 1495 aaKnown RBP15.26■□□□□ 0.03
LRP1-206ENST00000554118 AEBP2Q6ZN18 517 aaPredicted RBP15.24■□□□□ 0.03
LRP1-206ENST00000554118 DCAF1Q9Y4B6 1507 aa15.1■□□□□ 0.01
LRP1-206ENST00000554118 MYO15BQ96JP2 1530 aa15.08■□□□□ 0.01
LRP1-206ENST00000554118 SCRIBQ14160 1630 aa15.03■□□□□ -0
LRP1-206ENST00000554118 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
LRP1-206ENST00000554118 NESP48681 1621 aa14.84□□□□□ -0.03
LRP1-206ENST00000554118 OSCARQ8IYS5 282 aa14.8□□□□□ -0.04
LRP1-206ENST00000554118 THOC2Q8NI27 1593 aaKnown RBP14.78□□□□□ -0.04
LRP1-206ENST00000554118 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
LRP1-206ENST00000554118 SMARCA2P51531 1590 aa14.71□□□□□ -0.05
LRP1-206ENST00000554118 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
LRP1-206ENST00000554118 RIMBP3CA6NJZ7 1639 aa14.64□□□□□ -0.07
LRP1-206ENST00000554118 RIMBP3BA6NNM3 1639 aa14.64□□□□□ -0.07
LRP1-206ENST00000554118 RIMBP3Q9UFD9 1639 aa14.64□□□□□ -0.07
LRP1-206ENST00000554118 CYB5RLQ6IPT4 315 aa14.6□□□□□ -0.07
LRP1-206ENST00000554118 NCAPD3P42695 1498 aa14.59□□□□□ -0.07
LRP1-206ENST00000554118 KIF21AQ7Z4S6 1674 aa14.53□□□□□ -0.08
LRP1-206ENST00000554118 ARHGEF11O15085 1522 aa14.47□□□□□ -0.09
LRP1-206ENST00000554118 PDS5BQ9NTI5 1447 aa14.46□□□□□ -0.09
LRP1-206ENST00000554118 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
LRP1-206ENST00000554118 LAMC3Q9Y6N6 1575 aa14.43□□□□□ -0.1
LRP1-206ENST00000554118 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
LRP1-206ENST00000554118 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
LRP1-206ENST00000554118 WDR62O43379 1518 aa14.33□□□□□ -0.12
LRP1-206ENST00000554118 ARAP1Q96P48 1450 aa14.26□□□□□ -0.13
LRP1-206ENST00000554118 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
LRP1-206ENST00000554118 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
LRP1-206ENST00000554118 CEP164Q9UPV0 1460 aa14.12□□□□□ -0.15
LRP1-206ENST00000554118 SMARCA4P51532 1647 aa14.11□□□□□ -0.15
LRP1-206ENST00000554118 MROH2BQ7Z745 1585 aa14.05□□□□□ -0.16
LRP1-206ENST00000554118 FBLN2P98095 1184 aa14.04□□□□□ -0.16
LRP1-206ENST00000554118 FANCD2Q9BXW9 1451 aa14.01□□□□□ -0.17
LRP1-206ENST00000554118 KDM4FA0A1W2PPD8 638 aa14.01□□□□□ -0.17
LRP1-206ENST00000554118 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
LRP1-206ENST00000554118 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
LRP1-206ENST00000554118 PEG3Q9GZU2 1588 aa13.95□□□□□ -0.18
LRP1-206ENST00000554118 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
LRP1-206ENST00000554118 WIZO95785 1651 aa13.94□□□□□ -0.18
LRP1-206ENST00000554118 CHD1O14646 1710 aa13.93□□□□□ -0.18
LRP1-206ENST00000554118 FBXO41Q8TF61 875 aa13.91□□□□□ -0.18
LRP1-206ENST00000554118 LMTK3Q96Q04 1460 aa13.91□□□□□ -0.18
LRP1-206ENST00000554118 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
LRP1-206ENST00000554118 IFT140Q96RY7 1462 aa13.86□□□□□ -0.19
LRP1-206ENST00000554118 SOCS7O14512 581 aa13.84□□□□□ -0.19
LRP1-206ENST00000554118 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
LRP1-206ENST00000554118 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
LRP1-206ENST00000554118 ILDR2Q71H61 639 aa13.78□□□□□ -0.2
LRP1-206ENST00000554118 ERCC6L2Q5T890 1561 aa13.78□□□□□ -0.2
LRP1-206ENST00000554118 AQRO60306 1485 aaKnown RBP eCLIP13.76□□□□□ -0.213e-6■■■■□ 24.7
LRP1-206ENST00000554118 HECW2Q9P2P5 1572 aa13.73□□□□□ -0.21
LRP1-206ENST00000554118 GAPVD1Q14C86 1478 aa13.73□□□□□ -0.21
LRP1-206ENST00000554118 CFTRP13569 1480 aa13.71□□□□□ -0.21
LRP1-206ENST00000554118 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
LRP1-206ENST00000554118 CHMP7Q8WUX9 453 aaPredicted RBP13.67□□□□□ -0.22
LRP1-206ENST00000554118 DISP3Q9P2K9 1392 aa13.66□□□□□ -0.22
LRP1-206ENST00000554118 KIF13AQ9H1H9 1805 aa13.64□□□□□ -0.23
LRP1-206ENST00000554118 FAM69CQ0P6D2 419 aa13.63□□□□□ -0.23
LRP1-206ENST00000554118 CCDC88BA6NC98 1476 aa13.62□□□□□ -0.23
LRP1-206ENST00000554118 SYNJ1O43426 1573 aa13.62□□□□□ -0.23
LRP1-206ENST00000554118 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
LRP1-206ENST00000554118 TOPBP1Q92547 1522 aa13.6□□□□□ -0.23
LRP1-206ENST00000554118 ADGRL1O94910 1474 aa13.58□□□□□ -0.24
LRP1-206ENST00000554118 KDM6BO15054 1643 aa13.57□□□□□ -0.24
LRP1-206ENST00000554118 SNAPC4Q5SXM2 1469 aa13.55□□□□□ -0.24
LRP1-206ENST00000554118 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
LRP1-206ENST00000554118 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
LRP1-206ENST00000554118 PRDM2Q13029 1718 aa13.45□□□□□ -0.26
LRP1-206ENST00000554118 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
LRP1-206ENST00000554118 ABCC10Q5T3U5 1492 aa13.43□□□□□ -0.26
LRP1-206ENST00000554118 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
LRP1-206ENST00000554118 TSPOAP1O95153 1857 aa13.43□□□□□ -0.26
LRP1-206ENST00000554118 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
LRP1-206ENST00000554118 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
LRP1-206ENST00000554118 MAGI1Q96QZ7 1491 aaPredicted RBP13.4□□□□□ -0.26
LRP1-206ENST00000554118 POLA1P09884 1462 aaPredicted RBP13.39□□□□□ -0.27
LRP1-206ENST00000554118 SOGA1O94964 1423 aa13.38□□□□□ -0.27
LRP1-206ENST00000554118 DIP2BQ9P265 1576 aa13.34□□□□□ -0.27
LRP1-206ENST00000554118 GRIN2BQ13224 1484 aa13.32□□□□□ -0.28
LRP1-206ENST00000554118 CEP170Q5SW79 1584 aa13.31□□□□□ -0.28
LRP1-206ENST00000554118 SPATA31D1Q6ZQQ2 1576 aa13.28□□□□□ -0.28
LRP1-206ENST00000554118 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms