RNA–Protein interactions for RNA: ENST00000553932.5

LINC00639-201, long intergenic non-protein coding RNA 639, humanhuman

TSL 2 BASIC

Gene LINC00639, Length 4,496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-201ENST00000553932 CFDP1Q9UEE9 299 aaPredicted RBP19.21■□□□□ 0.67
LINC00639-201ENST00000553932 UNC13AQ9UPW8 1703 aa19.21■□□□□ 0.67
LINC00639-201ENST00000553932 TSPY4P0CV99 314 aa19.21■□□□□ 0.67
LINC00639-201ENST00000553932 TSPY10P0CW01 314 aa19.21■□□□□ 0.67
LINC00639-201ENST00000553932 UBE2Q2Q8WVN8 375 aa19.21■□□□□ 0.67
LINC00639-201ENST00000553932 PODXL2Q9NZ53 605 aa19.21■□□□□ 0.67
LINC00639-201ENST00000553932 RCAN3Q9UKA8 241 aa19.21■□□□□ 0.67
LINC00639-201ENST00000553932 PLEKHD1A6NEE1 506 aa19.2■□□□□ 0.66
LINC00639-201ENST00000553932 NESP48681 1621 aa19.19■□□□□ 0.66
LINC00639-201ENST00000553932 RAB3GAP2Q9H2M9 1393 aa19.19■□□□□ 0.66
LINC00639-201ENST00000553932 MYH16Q9H6N6 1097 aa19.18■□□□□ 0.66
LINC00639-201ENST00000553932 CFTRP13569 1480 aa19.17■□□□□ 0.66
LINC00639-201ENST00000553932 ZBTB7CA1YPR0 619 aa19.16■□□□□ 0.66
LINC00639-201ENST00000553932 NFKBIBQ15653 356 aa19.16■□□□□ 0.66
LINC00639-201ENST00000553932 FRAT1Q92837 279 aaPredicted RBP19.16■□□□□ 0.66
LINC00639-201ENST00000553932 FOXD1Q16676 465 aa19.15■□□□□ 0.66
LINC00639-201ENST00000553932 KIF21BO75037 1637 aa19.14■□□□□ 0.65
LINC00639-201ENST00000553932 HSP90AB1P08238 724 aaKnown RBP19.13■□□□□ 0.65
LINC00639-201ENST00000553932 SETD5Q9C0A6 1442 aa19.12■□□□□ 0.65
LINC00639-201ENST00000553932 TPRNQ4KMQ1 711 aa19.11■□□□□ 0.65
LINC00639-201ENST00000553932 CUX1P39880 1505 aa19.11■□□□□ 0.65
LINC00639-201ENST00000553932 ARHGAP35Q9NRY4 1499 aa19.1■□□□□ 0.65
LINC00639-201ENST00000553932 PLCB2Q00722 1185 aa19.1■□□□□ 0.65
LINC00639-201ENST00000553932 HSCBQ8IWL3 235 aa19.1■□□□□ 0.65
LINC00639-201ENST00000553932 ARAP1Q96P48 1450 aa19.09■□□□□ 0.65
LINC00639-201ENST00000553932 EXOC6Q8TAG9 804 aa19.09■□□□□ 0.65
LINC00639-201ENST00000553932 RGL3Q3MIN7 710 aa19.07■□□□□ 0.64
LINC00639-201ENST00000553932 ZBED9Q6R2W3 1325 aa19.06■□□□□ 0.64
LINC00639-201ENST00000553932 FMN1Q68DA7 1419 aa19.05■□□□□ 0.64
LINC00639-201ENST00000553932 CHGAP10645 457 aaKnown RBP19.04■□□□□ 0.64
LINC00639-201ENST00000553932 CC2D2AQ9P2K1 1620 aa19.04■□□□□ 0.64
LINC00639-201ENST00000553932 CARD11Q9BXL7 1154 aa19.04■□□□□ 0.64
LINC00639-201ENST00000553932 TOP2BQ02880 1626 aa19.03■□□□□ 0.64
LINC00639-201ENST00000553932 FAM43AQ8N2R8 423 aa19.02■□□□□ 0.64
LINC00639-201ENST00000553932 PRXQ9BXM0 1461 aa19.02■□□□□ 0.64
LINC00639-201ENST00000553932 CC2D1BQ5T0F9 858 aaKnown RBP19.01■□□□□ 0.63
LINC00639-201ENST00000553932 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
LINC00639-201ENST00000553932 FAM13BQ9NYF5 915 aa19.01■□□□□ 0.63
LINC00639-201ENST00000553932 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
LINC00639-201ENST00000553932 NEUROD2Q15784 382 aa19■□□□□ 0.63
LINC00639-201ENST00000553932 MS4A1P11836 297 aa19■□□□□ 0.63
LINC00639-201ENST00000553932 PRKRIP1Q9H875 184 aaPredicted RBP18.99■□□□□ 0.63
LINC00639-201ENST00000553932 GBP4Q96PP9 640 aa18.99■□□□□ 0.63
LINC00639-201ENST00000553932 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.63
LINC00639-201ENST00000553932 CHAF1AQ13111 956 aaPredicted RBP18.98■□□□□ 0.63
LINC00639-201ENST00000553932 SLC24A1O60721 1099 aa18.98■□□□□ 0.63
LINC00639-201ENST00000553932 FTSJ3Q8IY81 847 aaKnown RBP18.98■□□□□ 0.63
LINC00639-201ENST00000553932 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
LINC00639-201ENST00000553932 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
LINC00639-201ENST00000553932 NPM1P06748 294 aaKnown RBP eCLIP18.97■□□□□ 0.63
LINC00639-201ENST00000553932 FRAT2O75474 233 aaPredicted RBP18.97■□□□□ 0.63
LINC00639-201ENST00000553932 PLIN1O60240 522 aa18.96■□□□□ 0.63
LINC00639-201ENST00000553932 PHLDB1Q86UU1 1377 aa18.96■□□□□ 0.63
LINC00639-201ENST00000553932 RRP1P56182 461 aaKnown RBP18.95■□□□□ 0.62
LINC00639-201ENST00000553932 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
LINC00639-201ENST00000553932 JPH4Q96JJ6 628 aa18.93■□□□□ 0.62
LINC00639-201ENST00000553932 KNSTRNQ9Y448 316 aa18.92■□□□□ 0.62
LINC00639-201ENST00000553932 ZMYND15Q9H091 742 aa18.91■□□□□ 0.62
LINC00639-201ENST00000553932 MPHOSPH9Q99550 1183 aa18.89■□□□□ 0.61
LINC00639-201ENST00000553932 KIAA2012Q0VF49 1180 aa18.89■□□□□ 0.61
LINC00639-201ENST00000553932 POLA1P09884 1462 aaPredicted RBP18.89■□□□□ 0.61
LINC00639-201ENST00000553932 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
LINC00639-201ENST00000553932 MFAP1P55081 439 aaKnown RBP18.87■□□□□ 0.61
LINC00639-201ENST00000553932 TOPBP1Q92547 1522 aa18.87■□□□□ 0.61
LINC00639-201ENST00000553932 CRBNQ96SW2 442 aa18.87■□□□□ 0.61
LINC00639-201ENST00000553932 RRP9O43818 475 aaKnown RBP18.86■□□□□ 0.61
LINC00639-201ENST00000553932 PKD2Q13563 968 aa18.84■□□□□ 0.61
LINC00639-201ENST00000553932 CENPQQ7L2Z9 268 aaPredicted RBP18.84■□□□□ 0.61
LINC00639-201ENST00000553932 TNNT3P45378 269 aaPredicted RBP18.84■□□□□ 0.61
LINC00639-201ENST00000553932 FOXD4L1Q9NU39 408 aa18.84■□□□□ 0.61
LINC00639-201ENST00000553932 ZNF644Q9H582 1327 aaPredicted RBP18.84■□□□□ 0.61
LINC00639-201ENST00000553932 PDE3BQ13370 1112 aa18.83■□□□□ 0.6
LINC00639-201ENST00000553932 DDX11L8A8MPP1 907 aa18.82■□□□□ 0.6
LINC00639-201ENST00000553932 PTMSP20962 102 aa18.82■□□□□ 0.6
LINC00639-201ENST00000553932 LRRC9Q6ZRR7 1453 aa18.82■□□□□ 0.6
LINC00639-201ENST00000553932 HNRNPMP52272 730 aaKnown RBP eCLIP18.82■□□□□ 0.6
LINC00639-201ENST00000553932 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
LINC00639-201ENST00000553932 L3MBTL2Q969R5 705 aa18.81■□□□□ 0.6
LINC00639-201ENST00000553932 BACH2Q9BYV9 841 aa18.8■□□□□ 0.6
LINC00639-201ENST00000553932 CARMIL2Q6F5E8 1435 aa18.8■□□□□ 0.6
LINC00639-201ENST00000553932 PLPPR3Q6T4P5 718 aa18.8■□□□□ 0.6
LINC00639-201ENST00000553932 DCAF11Q8TEB1 546 aa18.8■□□□□ 0.6
LINC00639-201ENST00000553932 RBM10P98175 930 aaKnown RBP18.79■□□□□ 0.6
LINC00639-201ENST00000553932 RALBP1Q15311 655 aa18.78■□□□□ 0.6
LINC00639-201ENST00000553932 CASC1Q6TDU7 716 aa18.76■□□□□ 0.59
LINC00639-201ENST00000553932 MRE11P49959 708 aa18.76■□□□□ 0.59
LINC00639-201ENST00000553932 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.76■□□□□ 0.59
LINC00639-201ENST00000553932 R3HCC1Q9Y3T6 440 aaKnown RBP18.76■□□□□ 0.59
LINC00639-201ENST00000553932 DDX49Q9Y6V7 483 aaKnown RBP18.76■□□□□ 0.59
LINC00639-201ENST00000553932 KTN1Q86UP2 1357 aaKnown RBP18.75■□□□□ 0.59
LINC00639-201ENST00000553932 TPM2P07951 284 aa18.74■□□□□ 0.59
LINC00639-201ENST00000553932 RWDD1Q9H446 243 aaPredicted RBP18.74■□□□□ 0.59
LINC00639-201ENST00000553932 FGD6Q6ZV73 1430 aa18.73■□□□□ 0.59
LINC00639-201ENST00000553932 NLRP13Q86W25 1043 aa18.73■□□□□ 0.59
LINC00639-201ENST00000553932 AKNAQ7Z591 1439 aa18.72■□□□□ 0.59
LINC00639-201ENST00000553932 NUP155O75694 1391 aa18.72■□□□□ 0.59
LINC00639-201ENST00000553932 ZNF771Q7L3S4 317 aaPredicted RBP18.71■□□□□ 0.59
LINC00639-201ENST00000553932 DRC7Q8IY82 874 aa18.71■□□□□ 0.59
LINC00639-201ENST00000553932 MAP7D2Q96T17 732 aa18.71■□□□□ 0.59
LINC00639-201ENST00000553932 RRBP1Q9P2E9 1410 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms