RNA–Protein interactions for RNA: ENST00000553932.5

LINC00639-201, long intergenic non-protein coding RNA 639, humanhuman

TSL 2 BASIC

Gene LINC00639, Length 4,496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-201ENST00000553932 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
LINC00639-201ENST00000553932 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
LINC00639-201ENST00000553932 PELP1Q8IZL8 1130 aaKnown RBP24.4■■□□□ 1.5
LINC00639-201ENST00000553932 SHROOM4Q9ULL8 1493 aa24.22■■□□□ 1.47
LINC00639-201ENST00000553932 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
LINC00639-201ENST00000553932 PCGF6Q9BYE7 350 aa24.03■■□□□ 1.44
LINC00639-201ENST00000553932 MYT1Q01538 1121 aa23.92■■□□□ 1.42
LINC00639-201ENST00000553932 HRCP23327 699 aa23.62■■□□□ 1.37
LINC00639-201ENST00000553932 CENPBP07199 599 aaPredicted RBP23.39■■□□□ 1.33
LINC00639-201ENST00000553932 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
LINC00639-201ENST00000553932 EHMT2Q96KQ7 1210 aa23.26■■□□□ 1.31
LINC00639-201ENST00000553932 ZEB1P37275 1124 aaPredicted RBP23.23■■□□□ 1.31
LINC00639-201ENST00000553932 YTHDC1Q96MU7 727 aaKnown RBP22.88■■□□□ 1.25
LINC00639-201ENST00000553932 CCER1Q8TC90 406 aaPredicted RBP22.82■■□□□ 1.24
LINC00639-201ENST00000553932 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
LINC00639-201ENST00000553932 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
LINC00639-201ENST00000553932 ERICH6Q7L0X2 663 aa22.72■■□□□ 1.23
LINC00639-201ENST00000553932 TTBK1Q5TCY1 1321 aaPredicted RBP22.69■■□□□ 1.22
LINC00639-201ENST00000553932 GTF3C3Q9Y5Q9 886 aa22.5■■□□□ 1.19
LINC00639-201ENST00000553932 LOC105371045A0A1W2PR82 267 aa22.38■■□□□ 1.17
LINC00639-201ENST00000553932 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
LINC00639-201ENST00000553932 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
LINC00639-201ENST00000553932 ACIN1Q9UKV3 1341 aaKnown RBP22.25■■□□□ 1.15
LINC00639-201ENST00000553932 DIEXFQ68CQ4 756 aaKnown RBP22.24■■□□□ 1.15
LINC00639-201ENST00000553932 NEFLP07196 543 aa22.22■■□□□ 1.15
LINC00639-201ENST00000553932 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
LINC00639-201ENST00000553932 APLP2Q06481 763 aa22.18■■□□□ 1.14
LINC00639-201ENST00000553932 ABCC9O60706 1549 aa22.15■■□□□ 1.14
LINC00639-201ENST00000553932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
LINC00639-201ENST00000553932 ZCCHC6Q5VYS8 1495 aaKnown RBP21.97■■□□□ 1.11
LINC00639-201ENST00000553932 NEUROD1Q13562 356 aa21.92■■□□□ 1.1
LINC00639-201ENST00000553932 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
LINC00639-201ENST00000553932 PABPN1Q86U42 306 aaKnown RBP eCLIP21.74■■□□□ 1.07
LINC00639-201ENST00000553932 CCDC180Q9P1Z9 1646 aa21.74■■□□□ 1.07
LINC00639-201ENST00000553932 BCANQ96GW7 911 aa21.72■■□□□ 1.07
LINC00639-201ENST00000553932 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.06
LINC00639-201ENST00000553932 HNRNPUL2Q1KMD3 747 aaKnown RBP21.57■■□□□ 1.04
LINC00639-201ENST00000553932 RTL5Q5HYW3 569 aaPredicted RBP21.53■■□□□ 1.04
LINC00639-201ENST00000553932 ZNF316A6NFI3 1004 aaPredicted RBP21.53■■□□□ 1.04
LINC00639-201ENST00000553932 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
LINC00639-201ENST00000553932 BCL11AQ9H165 835 aa21.38■■□□□ 1.01
LINC00639-201ENST00000553932 ANP32EQ9BTT0 268 aa21.31■■□□□ 1
LINC00639-201ENST00000553932 DCAF1Q9Y4B6 1507 aa21.31■■□□□ 1
LINC00639-201ENST00000553932 DAXXQ9UER7 740 aaPredicted RBP21.27■■□□□ 1
LINC00639-201ENST00000553932 CDK11AQ9UQ88 783 aaPredicted RBP21.25■□□□□ 0.99
LINC00639-201ENST00000553932 ITGAEP38570 1179 aa21.19■□□□□ 0.98
LINC00639-201ENST00000553932 ATP1B4Q9UN42 357 aaPredicted RBP21.17■□□□□ 0.98
LINC00639-201ENST00000553932 CLSPNQ9HAW4 1339 aa21.16■□□□□ 0.98
LINC00639-201ENST00000553932 EIF5BO60841 1220 aaKnown RBP21.16■□□□□ 0.98
LINC00639-201ENST00000553932 FKBP8Q14318 412 aa21.15■□□□□ 0.98
LINC00639-201ENST00000553932 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.97
LINC00639-201ENST00000553932 MIER1Q8N108 512 aa21.11■□□□□ 0.97
LINC00639-201ENST00000553932 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
LINC00639-201ENST00000553932 CNGB1Q14028 1251 aaPredicted RBP21■□□□□ 0.95
LINC00639-201ENST00000553932 MYT1LQ9UL68 1186 aa20.96■□□□□ 0.95
LINC00639-201ENST00000553932 NBR1Q14596 966 aa20.93■□□□□ 0.94
LINC00639-201ENST00000553932 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.93
LINC00639-201ENST00000553932 ANP32CO43423 234 aa20.88■□□□□ 0.93
LINC00639-201ENST00000553932 POLR3GLQ9BT43 218 aa20.86■□□□□ 0.93
LINC00639-201ENST00000553932 CSRNP3Q8WYN3 585 aa20.84■□□□□ 0.93
LINC00639-201ENST00000553932 ANP32AP39687 249 aaKnown RBP20.84■□□□□ 0.93
LINC00639-201ENST00000553932 NACADO15069 1562 aa20.79■□□□□ 0.92
LINC00639-201ENST00000553932 SUPT16HQ9Y5B9 1047 aaKnown RBP20.78■□□□□ 0.92
LINC00639-201ENST00000553932 RB1CC1Q8TDY2 1594 aa20.77■□□□□ 0.92
LINC00639-201ENST00000553932 NPM2Q86SE8 214 aaKnown RBP20.72■□□□□ 0.91
LINC00639-201ENST00000553932 TRIM52Q96A61 297 aa20.7■□□□□ 0.9
LINC00639-201ENST00000553932 GLIPR1L2Q4G1C9 344 aa20.65■□□□□ 0.9
LINC00639-201ENST00000553932 RTN4Q9NQC3 1192 aaKnown RBP20.62■□□□□ 0.89
LINC00639-201ENST00000553932 DDX10Q13206 875 aaKnown RBP20.61■□□□□ 0.89
LINC00639-201ENST00000553932 IRX6P78412 446 aaPredicted RBP20.6■□□□□ 0.89
LINC00639-201ENST00000553932 ZBTB47Q9UFB7 747 aaPredicted RBP20.59■□□□□ 0.89
LINC00639-201ENST00000553932 TSHZ2Q9NRE2 1034 aa20.59■□□□□ 0.89
LINC00639-201ENST00000553932 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
LINC00639-201ENST00000553932 HNRNPUQ00839 825 aaKnown RBP eCLIP20.57■□□□□ 0.88
LINC00639-201ENST00000553932 RBM19Q9Y4C8 960 aaKnown RBP20.52■□□□□ 0.87
LINC00639-201ENST00000553932 DEKP35659 375 aaKnown RBP20.51■□□□□ 0.87
LINC00639-201ENST00000553932 P3H3Q8IVL6 736 aa20.46■□□□□ 0.87
LINC00639-201ENST00000553932 FAM50AQ14320 339 aaKnown RBP20.46■□□□□ 0.87
LINC00639-201ENST00000553932 BAZ1AQ9NRL2 1556 aaPredicted RBP20.41■□□□□ 0.86
LINC00639-201ENST00000553932 CCDC136Q96JN2 1154 aa20.36■□□□□ 0.85
LINC00639-201ENST00000553932 WIZO95785 1651 aa20.33■□□□□ 0.84
LINC00639-201ENST00000553932 FAM9BQ8IZU0 186 aa20.3■□□□□ 0.84
LINC00639-201ENST00000553932 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.29■□□□□ 0.84
LINC00639-201ENST00000553932 NOP58Q9Y2X3 529 aaKnown RBP20.27■□□□□ 0.84
LINC00639-201ENST00000553932 BAZ1BQ9UIG0 1483 aaKnown RBP20.26■□□□□ 0.83
LINC00639-201ENST00000553932 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.83
LINC00639-201ENST00000553932 ARXQ96QS3 562 aa20.25■□□□□ 0.83
LINC00639-201ENST00000553932 CCDC88BA6NC98 1476 aa20.25■□□□□ 0.83
LINC00639-201ENST00000553932 HIRIP3Q9BW71 556 aaPredicted RBP20.25■□□□□ 0.83
LINC00639-201ENST00000553932 NEFMP07197 916 aa20.24■□□□□ 0.83
LINC00639-201ENST00000553932 PRKCSHP14314 528 aaPredicted RBP20.24■□□□□ 0.83
LINC00639-201ENST00000553932 SOGA1O94964 1423 aa20.24■□□□□ 0.83
LINC00639-201ENST00000553932 ARID3CA6NKF2 412 aa20.23■□□□□ 0.83
LINC00639-201ENST00000553932 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
LINC00639-201ENST00000553932 CEP162Q5TB80 1403 aa20.18■□□□□ 0.82
LINC00639-201ENST00000553932 LAS1LQ9Y4W2 734 aaKnown RBP20.16■□□□□ 0.82
LINC00639-201ENST00000553932 FBLN2P98095 1184 aa20.15■□□□□ 0.82
LINC00639-201ENST00000553932 CLIP1P30622 1438 aa20.1■□□□□ 0.81
LINC00639-201ENST00000553932 ZNF326Q5BKZ1 582 aaKnown RBP20.09■□□□□ 0.81
LINC00639-201ENST00000553932 PPP4R2Q9NY27 417 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms