RNA–Protein interactions for RNA: ENST00000551765.5

GATC-203, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATC, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-203ENST00000551765 ROCK2O75116 1388 aaKnown RBP17.6■□□□□ 0.41
GATC-203ENST00000551765 ANKRD30AQ9BXX3 1397 aa17.6■□□□□ 0.41
GATC-203ENST00000551765 RRBP1Q9P2E9 1410 aaKnown RBP17.6■□□□□ 0.41
GATC-203ENST00000551765 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
GATC-203ENST00000551765 CARMIL2Q6F5E8 1435 aa17.6■□□□□ 0.41
GATC-203ENST00000551765 ERICH3Q5RHP9 1530 aa17.56■□□□□ 0.4
GATC-203ENST00000551765 CDCA8Q53HL2 280 aa17.54■□□□□ 0.4
GATC-203ENST00000551765 UPF2Q9HAU5 1272 aaKnown RBP17.54■□□□□ 0.4
GATC-203ENST00000551765 WASHC2AQ641Q2 1341 aa17.54■□□□□ 0.4
GATC-203ENST00000551765 NUTM2DQ5VT03 806 aaPredicted RBP17.54■□□□□ 0.4
GATC-203ENST00000551765 MYOM3Q5VTT5 1437 aa17.53■□□□□ 0.4
GATC-203ENST00000551765 HSP90AA1P07900 732 aaKnown RBP17.52■□□□□ 0.4
GATC-203ENST00000551765 NCOA2Q15596 1464 aa17.51■□□□□ 0.39
GATC-203ENST00000551765 KIF3BO15066 747 aa17.51■□□□□ 0.39
GATC-203ENST00000551765 U2SURPO15042 1029 aaKnown RBP17.5■□□□□ 0.39
GATC-203ENST00000551765 STK26Q9P289 416 aa17.5■□□□□ 0.39
GATC-203ENST00000551765 RCAN3Q9UKA8 241 aa17.5■□□□□ 0.39
GATC-203ENST00000551765 MLECQ14165 292 aa17.49■□□□□ 0.39
GATC-203ENST00000551765 CCDC184Q52MB2 194 aa17.49■□□□□ 0.39
GATC-203ENST00000551765 CASKIN1Q8WXD9 1431 aa17.49■□□□□ 0.39
GATC-203ENST00000551765 UACAQ9BZF9 1416 aa17.49■□□□□ 0.39
GATC-203ENST00000551765 NOP58Q9Y2X3 529 aaKnown RBP17.48■□□□□ 0.39
GATC-203ENST00000551765 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
GATC-203ENST00000551765 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
GATC-203ENST00000551765 POLA1P09884 1462 aaPredicted RBP17.47■□□□□ 0.39
GATC-203ENST00000551765 CCDC146Q8IYE0 955 aa17.47■□□□□ 0.39
GATC-203ENST00000551765 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
GATC-203ENST00000551765 NUDCQ9Y266 331 aa17.47■□□□□ 0.39
GATC-203ENST00000551765 USP47Q96K76 1375 aa17.47■□□□□ 0.39
GATC-203ENST00000551765 PLIN1O60240 522 aa17.46■□□□□ 0.39
GATC-203ENST00000551765 NBPF8Q3BBV2 869 aa17.46■□□□□ 0.39
GATC-203ENST00000551765 POGKQ9P215 609 aa17.45■□□□□ 0.38
GATC-203ENST00000551765 CFAP53Q96M91 514 aa17.45■□□□□ 0.38
GATC-203ENST00000551765 PANK3Q9H999 370 aa17.44■□□□□ 0.38
GATC-203ENST00000551765 WDR97A6NE52 1622 aa17.44■□□□□ 0.38
GATC-203ENST00000551765 EIF5BO60841 1220 aaKnown RBP17.43■□□□□ 0.38
GATC-203ENST00000551765 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
GATC-203ENST00000551765 ZBTB7CA1YPR0 619 aa17.42■□□□□ 0.38
GATC-203ENST00000551765 SOX12O15370 315 aa17.42■□□□□ 0.38
GATC-203ENST00000551765 RALBP1Q15311 655 aa17.42■□□□□ 0.38
GATC-203ENST00000551765 SRPK2P78362 688 aaKnown RBP17.41■□□□□ 0.38
GATC-203ENST00000551765 MORC1Q86VD1 984 aa17.41■□□□□ 0.38
GATC-203ENST00000551765 NLRP13Q86W25 1043 aa17.41■□□□□ 0.38
GATC-203ENST00000551765 FTSJ3Q8IY81 847 aaKnown RBP17.4■□□□□ 0.38
GATC-203ENST00000551765 TIAM1Q13009 1591 aa17.4■□□□□ 0.38
GATC-203ENST00000551765 C14orf37Q86TY3 774 aa17.4■□□□□ 0.38
GATC-203ENST00000551765 ARID4BQ4LE39 1312 aaPredicted RBP17.4■□□□□ 0.38
GATC-203ENST00000551765 CCDC7Q96M83 1385 aa17.4■□□□□ 0.38
GATC-203ENST00000551765 RTN4Q9NQC3 1192 aaKnown RBP17.39■□□□□ 0.38
GATC-203ENST00000551765 PTPRGP23470 1445 aa17.39■□□□□ 0.38
GATC-203ENST00000551765 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.38
GATC-203ENST00000551765 SPAG9O60271 1321 aaKnown RBP17.39■□□□□ 0.37
GATC-203ENST00000551765 UNC13AQ9UPW8 1703 aa17.39■□□□□ 0.37
GATC-203ENST00000551765 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
GATC-203ENST00000551765 TRAK1Q9UPV9 953 aa17.37■□□□□ 0.37
GATC-203ENST00000551765 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
GATC-203ENST00000551765 EXOC6Q8TAG9 804 aa17.36■□□□□ 0.37
GATC-203ENST00000551765 KANK1Q14678 1352 aa17.36■□□□□ 0.37
GATC-203ENST00000551765 CCDC144AA2RUR9 1427 aa17.36■□□□□ 0.37
GATC-203ENST00000551765 MAPK8IP3Q9UPT6 1336 aa17.35■□□□□ 0.37
GATC-203ENST00000551765 ZBED9Q6R2W3 1325 aa17.35■□□□□ 0.37
GATC-203ENST00000551765 RRP7AQ9Y3A4 280 aaKnown RBP17.34■□□□□ 0.37
GATC-203ENST00000551765 PRDM2Q13029 1718 aa17.34■□□□□ 0.37
GATC-203ENST00000551765 C11orf95C9JLR9 678 aaPredicted RBP17.34■□□□□ 0.37
GATC-203ENST00000551765 CLUAP1Q96AJ1 413 aa17.34■□□□□ 0.37
GATC-203ENST00000551765 U2AF1L5P0DN76 240 aaPredicted RBP17.32■□□□□ 0.36
GATC-203ENST00000551765 U2AF1Q01081 240 aaKnown RBP eCLIP17.32■□□□□ 0.36
GATC-203ENST00000551765 PRG4Q92954 1404 aaPredicted RBP17.32■□□□□ 0.36
GATC-203ENST00000551765 NBPF1Q3BBV0 1214 aa17.32■□□□□ 0.36
GATC-203ENST00000551765 MYBBP1AQ9BQG0 1328 aaKnown RBP17.32■□□□□ 0.36
GATC-203ENST00000551765 KIF15Q9NS87 1388 aa17.31■□□□□ 0.36
GATC-203ENST00000551765 SPRYD3Q8NCJ5 442 aa17.31■□□□□ 0.36
GATC-203ENST00000551765 DDRGK1Q96HY6 314 aa17.31■□□□□ 0.36
GATC-203ENST00000551765 ANKRD50Q9ULJ7 1429 aa17.3■□□□□ 0.36
GATC-203ENST00000551765 ERICH6BQ5W0A0 696 aa17.3■□□□□ 0.36
GATC-203ENST00000551765 HFM1A2PYH4 1435 aa17.3■□□□□ 0.36
GATC-203ENST00000551765 NAIPQ13075 1403 aa17.29■□□□□ 0.36
GATC-203ENST00000551765 DEKP35659 375 aaKnown RBP17.29■□□□□ 0.36
GATC-203ENST00000551765 BCL2L13Q9BXK5 485 aa17.29■□□□□ 0.36
GATC-203ENST00000551765 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
GATC-203ENST00000551765 CDK13Q14004 1512 aaKnown RBP17.28■□□□□ 0.36
GATC-203ENST00000551765 AFAP1Q8N556 730 aa17.28■□□□□ 0.36
GATC-203ENST00000551765 PCF11O94913 1555 aaKnown RBP17.28■□□□□ 0.36
GATC-203ENST00000551765 GOLGA2Q08379 1002 aa17.27■□□□□ 0.35
GATC-203ENST00000551765 CNTLNQ9NXG0 1405 aa17.27■□□□□ 0.35
GATC-203ENST00000551765 CDCA7LQ96GN5 454 aa17.26■□□□□ 0.35
GATC-203ENST00000551765 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
GATC-203ENST00000551765 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
GATC-203ENST00000551765 SLC4A3P48751 1232 aa17.24■□□□□ 0.35
GATC-203ENST00000551765 WASHC2CQ9Y4E1 1318 aa17.24■□□□□ 0.35
GATC-203ENST00000551765 APAF1O14727 1248 aa17.24■□□□□ 0.35
GATC-203ENST00000551765 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
GATC-203ENST00000551765 BECN1Q14457 450 aa17.23■□□□□ 0.35
GATC-203ENST00000551765 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
GATC-203ENST00000551765 RRP1P56182 461 aaKnown RBP17.22■□□□□ 0.35
GATC-203ENST00000551765 CRBNQ96SW2 442 aa17.22■□□□□ 0.35
GATC-203ENST00000551765 TPRNQ4KMQ1 711 aa17.2■□□□□ 0.34
GATC-203ENST00000551765 LMOD2Q6P5Q4 547 aa17.2■□□□□ 0.34
GATC-203ENST00000551765 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
GATC-203ENST00000551765 SLKQ9H2G2 1235 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms