RNA–Protein interactions for RNA: ENST00000551765.5

GATC-203, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATC, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-203ENST00000551765 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
GATC-203ENST00000551765 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
GATC-203ENST00000551765 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
GATC-203ENST00000551765 SHROOM4Q9ULL8 1493 aa23.07■■□□□ 1.28
GATC-203ENST00000551765 EHMT2Q96KQ7 1210 aa22.17■■□□□ 1.14
GATC-203ENST00000551765 FAM9AQ8IZU1 332 aaPredicted RBP21.7■■□□□ 1.06
GATC-203ENST00000551765 PCGF6Q9BYE7 350 aa21.64■■□□□ 1.05
GATC-203ENST00000551765 TTBK1Q5TCY1 1321 aaPredicted RBP21.36■■□□□ 1.01
GATC-203ENST00000551765 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
GATC-203ENST00000551765 LOC105371045A0A1W2PR82 267 aa21.13■□□□□ 0.97
GATC-203ENST00000551765 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
GATC-203ENST00000551765 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
GATC-203ENST00000551765 RANGAP1P46060 587 aaPredicted RBP20.99■□□□□ 0.95
GATC-203ENST00000551765 APLP2Q06481 763 aa20.74■□□□□ 0.91
GATC-203ENST00000551765 HRCP23327 699 aa20.71■□□□□ 0.91
GATC-203ENST00000551765 UBTFP17480 764 aaKnown RBP20.69■□□□□ 0.9
GATC-203ENST00000551765 CCER1Q8TC90 406 aaPredicted RBP20.68■□□□□ 0.9
GATC-203ENST00000551765 TRIM26Q12899 539 aaPredicted RBP20.59■□□□□ 0.89
GATC-203ENST00000551765 ABCC9O60706 1549 aa20.49■□□□□ 0.87
GATC-203ENST00000551765 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
GATC-203ENST00000551765 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
GATC-203ENST00000551765 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
GATC-203ENST00000551765 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
GATC-203ENST00000551765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.26■□□□□ 0.83
GATC-203ENST00000551765 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
GATC-203ENST00000551765 HNRNPUL2Q1KMD3 747 aaKnown RBP20.18■□□□□ 0.82
GATC-203ENST00000551765 ITGAEP38570 1179 aa20.11■□□□□ 0.81
GATC-203ENST00000551765 CENPBP07199 599 aaPredicted RBP20.09■□□□□ 0.81
GATC-203ENST00000551765 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
GATC-203ENST00000551765 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
GATC-203ENST00000551765 PELP1Q8IZL8 1130 aaKnown RBP19.79■□□□□ 0.76
GATC-203ENST00000551765 CCDC180Q9P1Z9 1646 aa19.79■□□□□ 0.76
GATC-203ENST00000551765 DIEXFQ68CQ4 756 aaKnown RBP19.77■□□□□ 0.75
GATC-203ENST00000551765 CSRNP3Q8WYN3 585 aa19.67■□□□□ 0.74
GATC-203ENST00000551765 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
GATC-203ENST00000551765 DCAF1Q9Y4B6 1507 aa19.58■□□□□ 0.73
GATC-203ENST00000551765 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
GATC-203ENST00000551765 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.72
GATC-203ENST00000551765 P3H3Q8IVL6 736 aa19.49■□□□□ 0.71
GATC-203ENST00000551765 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
GATC-203ENST00000551765 GTF3C3Q9Y5Q9 886 aa19.44■□□□□ 0.7
GATC-203ENST00000551765 POLR3GLQ9BT43 218 aa19.42■□□□□ 0.7
GATC-203ENST00000551765 CECR2Q9BXF3 1484 aa19.4■□□□□ 0.7
GATC-203ENST00000551765 NEFLP07196 543 aa19.37■□□□□ 0.69
GATC-203ENST00000551765 ZNF316A6NFI3 1004 aaPredicted RBP19.35■□□□□ 0.69
GATC-203ENST00000551765 ARID3CA6NKF2 412 aa19.32■□□□□ 0.68
GATC-203ENST00000551765 ACIN1Q9UKV3 1341 aaKnown RBP19.22■□□□□ 0.67
GATC-203ENST00000551765 BCANQ96GW7 911 aa19.19■□□□□ 0.66
GATC-203ENST00000551765 TRIM52Q96A61 297 aa19.18■□□□□ 0.66
GATC-203ENST00000551765 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
GATC-203ENST00000551765 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
GATC-203ENST00000551765 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
GATC-203ENST00000551765 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
GATC-203ENST00000551765 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
GATC-203ENST00000551765 FBLN2P98095 1184 aa19.08■□□□□ 0.65
GATC-203ENST00000551765 MYT1LQ9UL68 1186 aa19.05■□□□□ 0.64
GATC-203ENST00000551765 SOGA1O94964 1423 aa19.04■□□□□ 0.64
GATC-203ENST00000551765 CLIP1P30622 1438 aa19.04■□□□□ 0.64
GATC-203ENST00000551765 NACADO15069 1562 aa19.03■□□□□ 0.64
GATC-203ENST00000551765 ZNF326Q5BKZ1 582 aaKnown RBP19.03■□□□□ 0.64
GATC-203ENST00000551765 MIER1Q8N108 512 aa19.01■□□□□ 0.63
GATC-203ENST00000551765 HIRIP3Q9BW71 556 aaPredicted RBP18.98■□□□□ 0.63
GATC-203ENST00000551765 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
GATC-203ENST00000551765 ABCC8Q09428 1581 aa18.94■□□□□ 0.62
GATC-203ENST00000551765 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
GATC-203ENST00000551765 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
GATC-203ENST00000551765 ANP32CO43423 234 aa18.89■□□□□ 0.62
GATC-203ENST00000551765 CHIC2Q9UKJ5 165 aa18.88■□□□□ 0.61
GATC-203ENST00000551765 BAZ1AQ9NRL2 1556 aaPredicted RBP18.88■□□□□ 0.61
GATC-203ENST00000551765 TNIKQ9UKE5 1360 aa18.87■□□□□ 0.61
GATC-203ENST00000551765 GOLGA3Q08378 1498 aa18.87■□□□□ 0.61
GATC-203ENST00000551765 ZNF777Q9ULD5 760 aaPredicted RBP18.85■□□□□ 0.61
GATC-203ENST00000551765 WIZO95785 1651 aa18.85■□□□□ 0.61
GATC-203ENST00000551765 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
GATC-203ENST00000551765 EEA1Q15075 1411 aa18.77■□□□□ 0.59
GATC-203ENST00000551765 TONSLQ96HA7 1378 aa18.7■□□□□ 0.58
GATC-203ENST00000551765 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
GATC-203ENST00000551765 CEP164Q9UPV0 1460 aa18.69■□□□□ 0.58
GATC-203ENST00000551765 FKBP8Q14318 412 aa18.69■□□□□ 0.58
GATC-203ENST00000551765 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
GATC-203ENST00000551765 KANK4Q5T7N3 995 aaPredicted RBP18.68■□□□□ 0.58
GATC-203ENST00000551765 SIN3AQ96ST3 1273 aa18.66■□□□□ 0.58
GATC-203ENST00000551765 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
GATC-203ENST00000551765 MTUS2Q5JR59 1369 aa18.63■□□□□ 0.57
GATC-203ENST00000551765 HNRNPUQ00839 825 aaKnown RBP eCLIP18.61■□□□□ 0.57
GATC-203ENST00000551765 KIF27Q86VH2 1401 aa18.6■□□□□ 0.57
GATC-203ENST00000551765 SENP3-EIF4A1A0A087X0R7 540 aa18.6■□□□□ 0.57
GATC-203ENST00000551765 FAM9BQ8IZU0 186 aa18.59■□□□□ 0.57
GATC-203ENST00000551765 MYT1Q01538 1121 aa18.57■□□□□ 0.56
GATC-203ENST00000551765 IRX6P78412 446 aaPredicted RBP18.55■□□□□ 0.56
GATC-203ENST00000551765 SALL2Q9Y467 1007 aaPredicted RBP18.52■□□□□ 0.56
GATC-203ENST00000551765 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
GATC-203ENST00000551765 VPS8Q8N3P4 1428 aa18.48■□□□□ 0.55
GATC-203ENST00000551765 KDM2AQ9Y2K7 1162 aa18.47■□□□□ 0.55
GATC-203ENST00000551765 TOP2AP11388 1531 aaKnown RBP18.47■□□□□ 0.55
GATC-203ENST00000551765 CUX2O14529 1486 aa18.47■□□□□ 0.55
GATC-203ENST00000551765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.44■□□□□ 0.54
GATC-203ENST00000551765 CCNB3Q8WWL7 1395 aa18.44■□□□□ 0.54
GATC-203ENST00000551765 RAPGEF2Q9Y4G8 1499 aa18.43■□□□□ 0.54
GATC-203ENST00000551765 CARMIL1Q5VZK9 1371 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms