RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 WDR62O43379 1518 aa22.18■■□□□ 1.14
SNRNP70-203ENST00000544278 DENND4BO75064 1496 aaPredicted RBP22.18■■□□□ 1.14
SNRNP70-203ENST00000544278 NUP153P49790 1475 aaKnown RBP22.18■■□□□ 1.14
SNRNP70-203ENST00000544278 NBPF8Q3BBV2 869 aa22.17■■□□□ 1.14
SNRNP70-203ENST00000544278 CDK11AQ9UQ88 783 aaPredicted RBP22.16■■□□□ 1.14
SNRNP70-203ENST00000544278 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
SNRNP70-203ENST00000544278 IRX6P78412 446 aaPredicted RBP22.15■■□□□ 1.14
SNRNP70-203ENST00000544278 TIMELESSQ9UNS1 1208 aa22.15■■□□□ 1.14
SNRNP70-203ENST00000544278 CCDC184Q52MB2 194 aa22.15■■□□□ 1.14
SNRNP70-203ENST00000544278 KIAA0586Q9BVV6 1533 aa22.15■■□□□ 1.14
SNRNP70-203ENST00000544278 WASHC2AQ641Q2 1341 aa22.14■■□□□ 1.13
SNRNP70-203ENST00000544278 ABCC5O15440 1437 aa22.11■■□□□ 1.13
SNRNP70-203ENST00000544278 ARHGEF11O15085 1522 aa22.1■■□□□ 1.13
SNRNP70-203ENST00000544278 HNRNPMP52272 730 aaKnown RBP eCLIP22.09■■□□□ 1.133e-8■■□□□ 13.9
SNRNP70-203ENST00000544278 DAPK1P53355 1430 aa22.09■■□□□ 1.13
SNRNP70-203ENST00000544278 KIAA0556O60303 1618 aa22.09■■□□□ 1.13
SNRNP70-203ENST00000544278 HNRNPUQ00839 825 aaKnown RBP eCLIP22.08■■□□□ 1.134e-9■■□□□ 13
SNRNP70-203ENST00000544278 EIF4G2P78344 907 aaKnown RBP eCLIP22.08■■□□□ 1.133e-49■■□□□ 13.3
SNRNP70-203ENST00000544278 KDM2AQ9Y2K7 1162 aa22.08■■□□□ 1.13
SNRNP70-203ENST00000544278 PLEKHD1A6NEE1 506 aa22.05■■□□□ 1.12
SNRNP70-203ENST00000544278 PKD2Q13563 968 aa22.05■■□□□ 1.12
SNRNP70-203ENST00000544278 FAM9BQ8IZU0 186 aa22.04■■□□□ 1.12
SNRNP70-203ENST00000544278 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
SNRNP70-203ENST00000544278 TCOF1Q13428 1488 aaKnown RBP22.03■■□□□ 1.12
SNRNP70-203ENST00000544278 KDM5BQ9UGL1 1544 aa22.03■■□□□ 1.12
SNRNP70-203ENST00000544278 MIA2Q96PC5 1412 aa22.01■■□□□ 1.11
SNRNP70-203ENST00000544278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.99■■□□□ 1.111e-10■□□□□ 11.1
SNRNP70-203ENST00000544278 KIF14Q15058 1648 aa21.99■■□□□ 1.11
SNRNP70-203ENST00000544278 RAPGEF6Q8TEU7 1601 aa21.99■■□□□ 1.11
SNRNP70-203ENST00000544278 SYNJ2O15056 1496 aa21.96■■□□□ 1.11
SNRNP70-203ENST00000544278 TROQ12816 1431 aaPredicted RBP21.96■■□□□ 1.11
SNRNP70-203ENST00000544278 ANKRD30BQ9BXX2 1392 aa21.96■■□□□ 1.11
SNRNP70-203ENST00000544278 CAMSAP2Q08AD1 1489 aa21.94■■□□□ 1.1
SNRNP70-203ENST00000544278 GPATCH8Q9UKJ3 1502 aaKnown RBP21.93■■□□□ 1.1
SNRNP70-203ENST00000544278 CARMIL2Q6F5E8 1435 aa21.92■■□□□ 1.1
SNRNP70-203ENST00000544278 RGL3Q3MIN7 710 aa21.92■■□□□ 1.1
SNRNP70-203ENST00000544278 ANP32EQ9BTT0 268 aa21.92■■□□□ 1.1
SNRNP70-203ENST00000544278 CCER2I3L3R5 266 aa21.92■■□□□ 1.1
SNRNP70-203ENST00000544278 PRKCSHP14314 528 aaPredicted RBP21.91■■□□□ 1.1
SNRNP70-203ENST00000544278 NUP155O75694 1391 aa21.9■■□□□ 1.1
SNRNP70-203ENST00000544278 NEFLP07196 543 aa21.9■■□□□ 1.1
SNRNP70-203ENST00000544278 TSPY4P0CV99 314 aa21.89■■□□□ 1.1
SNRNP70-203ENST00000544278 TSPY10P0CW01 314 aa21.89■■□□□ 1.1
SNRNP70-203ENST00000544278 MRS2Q9HD23 443 aa21.89■■□□□ 1.09
SNRNP70-203ENST00000544278 MAGI1Q96QZ7 1491 aaPredicted RBP21.89■■□□□ 1.09
SNRNP70-203ENST00000544278 NCOA1Q15788 1441 aa21.88■■□□□ 1.09
SNRNP70-203ENST00000544278 GCC2Q8IWJ2 1684 aa21.88■■□□□ 1.09
SNRNP70-203ENST00000544278 AKNAQ7Z591 1439 aa21.87■■□□□ 1.09
SNRNP70-203ENST00000544278 TSHZ2Q9NRE2 1034 aa21.87■■□□□ 1.09
SNRNP70-203ENST00000544278 KIF7Q2M1P5 1343 aa21.87■■□□□ 1.09
SNRNP70-203ENST00000544278 ATP10BO94823 1461 aa21.85■■□□□ 1.09
SNRNP70-203ENST00000544278 PTPRGP23470 1445 aa21.84■■□□□ 1.09
SNRNP70-203ENST00000544278 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
SNRNP70-203ENST00000544278 CCDC7Q96M83 1385 aa21.83■■□□□ 1.09
SNRNP70-203ENST00000544278 DNMT1P26358 1616 aaKnown RBP21.83■■□□□ 1.08
SNRNP70-203ENST00000544278 PZPP20742 1482 aa21.82■■□□□ 1.08
SNRNP70-203ENST00000544278 ANKRD50Q9ULJ7 1429 aa21.82■■□□□ 1.08
SNRNP70-203ENST00000544278 PRKRIP1Q9H875 184 aaPredicted RBP21.81■■□□□ 1.08
SNRNP70-203ENST00000544278 ROCK1Q13464 1354 aa21.81■■□□□ 1.08
SNRNP70-203ENST00000544278 ANKRD30AQ9BXX3 1397 aa21.81■■□□□ 1.08
SNRNP70-203ENST00000544278 RPRD2Q5VT52 1461 aaKnown RBP21.8■■□□□ 1.08
SNRNP70-203ENST00000544278 NUP160Q12769 1436 aa21.8■■□□□ 1.08
SNRNP70-203ENST00000544278 CARD11Q9BXL7 1154 aa21.77■■□□□ 1.08
SNRNP70-203ENST00000544278 TEX14Q8IWB6 1497 aa21.77■■□□□ 1.07
SNRNP70-203ENST00000544278 SALL2Q9Y467 1007 aaPredicted RBP21.76■■□□□ 1.07
SNRNP70-203ENST00000544278 C9orf84Q5VXU9 1444 aa21.75■■□□□ 1.07
SNRNP70-203ENST00000544278 KIF15Q9NS87 1388 aa21.74■■□□□ 1.07
SNRNP70-203ENST00000544278 CNTLNQ9NXG0 1405 aa21.73■■□□□ 1.07
SNRNP70-203ENST00000544278 USP47Q96K76 1375 aa21.72■■□□□ 1.07
SNRNP70-203ENST00000544278 ST20-MTHFSA0A0A6YYL1 179 aa21.72■■□□□ 1.07
SNRNP70-203ENST00000544278 KIAA1107Q9UPP5 1409 aa21.71■■□□□ 1.07
SNRNP70-203ENST00000544278 ERCC6L2Q5T890 1561 aa21.71■■□□□ 1.07
SNRNP70-203ENST00000544278 MYT1LQ9UL68 1186 aa21.7■■□□□ 1.07
SNRNP70-203ENST00000544278 NBPF1Q3BBV0 1214 aa21.68■■□□□ 1.06
SNRNP70-203ENST00000544278 ABCC10Q5T3U5 1492 aa21.64■■□□□ 1.05
SNRNP70-203ENST00000544278 CDC42BPAQ5VT25 1732 aa21.63■■□□□ 1.05
SNRNP70-203ENST00000544278 ABCA8O94911 1581 aa21.63■■□□□ 1.05
SNRNP70-203ENST00000544278 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
SNRNP70-203ENST00000544278 SPATA31E1Q6ZUB1 1445 aa21.61■■□□□ 1.05
SNRNP70-203ENST00000544278 AFAP1Q8N556 730 aa21.59■■□□□ 1.05
SNRNP70-203ENST00000544278 ITSN2Q9NZM3 1697 aa21.59■■□□□ 1.05
SNRNP70-203ENST00000544278 B4GALNT3Q6L9W6 998 aa21.59■■□□□ 1.05
SNRNP70-203ENST00000544278 ARHGAP5Q13017 1502 aa21.56■■□□□ 1.04
SNRNP70-203ENST00000544278 ROCK2O75116 1388 aaKnown RBP21.54■■□□□ 1.04
SNRNP70-203ENST00000544278 SYCP2Q9BX26 1530 aa21.54■■□□□ 1.04
SNRNP70-203ENST00000544278 MBD5Q9P267 1494 aa21.54■■□□□ 1.04
SNRNP70-203ENST00000544278 BCORL1Q5H9F3 1711 aa21.54■■□□□ 1.04
SNRNP70-203ENST00000544278 TMC1Q8TDI8 760 aa21.53■■□□□ 1.04
SNRNP70-203ENST00000544278 CHD1O14646 1710 aa21.53■■□□□ 1.04
SNRNP70-203ENST00000544278 ADGRL2O95490 1459 aa21.53■■□□□ 1.04
SNRNP70-203ENST00000544278 PLEKHH2Q8IVE3 1493 aa21.52■■□□□ 1.04
SNRNP70-203ENST00000544278 CC2D1BQ5T0F9 858 aaKnown RBP21.51■■□□□ 1.03
SNRNP70-203ENST00000544278 SAMD9LQ8IVG5 1584 aa21.5■■□□□ 1.03
SNRNP70-203ENST00000544278 DHX29Q7Z478 1369 aaKnown RBP21.5■■□□□ 1.03
SNRNP70-203ENST00000544278 RBM19Q9Y4C8 960 aaKnown RBP21.5■■□□□ 1.03
SNRNP70-203ENST00000544278 ADGBQ8N7X0 1667 aa21.49■■□□□ 1.03
SNRNP70-203ENST00000544278 TTC37Q6PGP7 1564 aa21.48■■□□□ 1.03
SNRNP70-203ENST00000544278 ADCY10Q96PN6 1610 aa21.47■■□□□ 1.03
SNRNP70-203ENST00000544278 CCDC141Q6ZP82 1450 aa21.47■■□□□ 1.03
SNRNP70-203ENST00000544278 CROCC2H7BZ55 1655 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms