RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 PPRC1Q5VV67 1664 aaKnown RBP9.04□□□□□ -0.96
ABCF1-207ENST00000542772 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.04□□□□□ -0.96
ABCF1-207ENST00000542772 RSPH4AQ5TD94 716 aa9.04□□□□□ -0.96
ABCF1-207ENST00000542772 NEO1Q92859 1461 aa9.03□□□□□ -0.96
ABCF1-207ENST00000542772 PREX2Q70Z35 1606 aa9.03□□□□□ -0.96
ABCF1-207ENST00000542772 AKNAQ7Z591 1439 aa9.03□□□□□ -0.96
ABCF1-207ENST00000542772 KIAA1107Q9UPP5 1409 aa9.03□□□□□ -0.96
ABCF1-207ENST00000542772 TEX14Q8IWB6 1497 aa9.02□□□□□ -0.96
ABCF1-207ENST00000542772 ITSN2Q9NZM3 1697 aa9.02□□□□□ -0.97
ABCF1-207ENST00000542772 RRBP1Q9P2E9 1410 aaKnown RBP9.02□□□□□ -0.97
ABCF1-207ENST00000542772 ZNF644Q9H582 1327 aaPredicted RBP9.02□□□□□ -0.97
ABCF1-207ENST00000542772 FANCAO15360 1455 aa9.02□□□□□ -0.97
ABCF1-207ENST00000542772 TCOF1Q13428 1488 aaKnown RBP9.02□□□□□ -0.97
ABCF1-207ENST00000542772 TSPOAP1O95153 1857 aa9.01□□□□□ -0.97
ABCF1-207ENST00000542772 FGD6Q6ZV73 1430 aa9.01□□□□□ -0.97
ABCF1-207ENST00000542772 ARHGAP5Q13017 1502 aa9□□□□□ -0.97
ABCF1-207ENST00000542772 ZNF777Q9ULD5 760 aaPredicted RBP9□□□□□ -0.97
ABCF1-207ENST00000542772 MBD5Q9P267 1494 aa9□□□□□ -0.97
ABCF1-207ENST00000542772 HNRNPMP52272 730 aaKnown RBP eCLIP8.99□□□□□ -0.97
ABCF1-207ENST00000542772 PLEKHH2Q8IVE3 1493 aa8.99□□□□□ -0.97
ABCF1-207ENST00000542772 ARHGEF12Q9NZN5 1544 aa8.99□□□□□ -0.97
ABCF1-207ENST00000542772 SAMD9LQ8IVG5 1584 aa8.99□□□□□ -0.97
ABCF1-207ENST00000542772 CFAP74Q9C0B2 1584 aa8.99□□□□□ -0.97
ABCF1-207ENST00000542772 PTPN23Q9H3S7 1636 aa8.98□□□□□ -0.97
ABCF1-207ENST00000542772 SCAPERQ9BY12 1400 aa8.98□□□□□ -0.97
ABCF1-207ENST00000542772 COL17A1Q9UMD9 1497 aaPredicted RBP8.98□□□□□ -0.97
ABCF1-207ENST00000542772 ADGRL1O94910 1474 aa8.96□□□□□ -0.97
ABCF1-207ENST00000542772 CAMSAP2Q08AD1 1489 aa8.96□□□□□ -0.97
ABCF1-207ENST00000542772 ARHGEF5Q12774 1597 aa8.96□□□□□ -0.97
ABCF1-207ENST00000542772 AFAP1Q8N556 730 aa8.96□□□□□ -0.98
ABCF1-207ENST00000542772 TRAPPC8Q9Y2L5 1435 aa8.96□□□□□ -0.98
ABCF1-207ENST00000542772 DENND4BO75064 1496 aaPredicted RBP8.96□□□□□ -0.98
ABCF1-207ENST00000542772 ABCC1P33527 1531 aa8.95□□□□□ -0.98
ABCF1-207ENST00000542772 RAPGEF3O95398 923 aa8.95□□□□□ -0.98
ABCF1-207ENST00000542772 TSPY4P0CV99 314 aa8.95□□□□□ -0.98
ABCF1-207ENST00000542772 TSPY10P0CW01 314 aa8.95□□□□□ -0.98
ABCF1-207ENST00000542772 ABCC5O15440 1437 aa8.95□□□□□ -0.98
ABCF1-207ENST00000542772 TRIM26Q12899 539 aaPredicted RBP8.94□□□□□ -0.98
ABCF1-207ENST00000542772 FAM50AQ14320 339 aaKnown RBP8.94□□□□□ -0.98
ABCF1-207ENST00000542772 RTEL1-TNFRSF6BF6WH68 1400 aa8.94□□□□□ -0.98
ABCF1-207ENST00000542772 DAPK1P53355 1430 aa8.93□□□□□ -0.98
ABCF1-207ENST00000542772 PTPRKQ15262 1439 aa8.93□□□□□ -0.98
ABCF1-207ENST00000542772 ZNF518AQ6AHZ1 1483 aa8.93□□□□□ -0.98
ABCF1-207ENST00000542772 MLH3Q9UHC1 1453 aa8.93□□□□□ -0.98
ABCF1-207ENST00000542772 RICTORQ6R327 1708 aa8.93□□□□□ -0.98
ABCF1-207ENST00000542772 DNMT1P26358 1616 aaKnown RBP8.92□□□□□ -0.98
ABCF1-207ENST00000542772 KDM5CP41229 1560 aa8.92□□□□□ -0.98
ABCF1-207ENST00000542772 SYCP2Q9BX26 1530 aa8.92□□□□□ -0.98
ABCF1-207ENST00000542772 CCDC141Q6ZP82 1450 aa8.92□□□□□ -0.98
ABCF1-207ENST00000542772 MAGI2Q86UL8 1455 aa8.92□□□□□ -0.98
ABCF1-207ENST00000542772 POGZQ7Z3K3 1410 aa8.92□□□□□ -0.98
ABCF1-207ENST00000542772 MAST1Q9Y2H9 1570 aa8.91□□□□□ -0.98
ABCF1-207ENST00000542772 SPAG9O60271 1321 aaKnown RBP8.91□□□□□ -0.98
ABCF1-207ENST00000542772 FRMPD1Q5SYB0 1578 aa8.9□□□□□ -0.98
ABCF1-207ENST00000542772 ZMYM4Q5VZL5 1548 aa8.9□□□□□ -0.98
ABCF1-207ENST00000542772 NCOA1Q15788 1441 aa8.9□□□□□ -0.98
ABCF1-207ENST00000542772 KDM6BO15054 1643 aa8.9□□□□□ -0.99
ABCF1-207ENST00000542772 SHANK2Q9UPX8 1470 aa8.89□□□□□ -0.99
ABCF1-207ENST00000542772 KIDINS220Q9ULH0 1771 aa8.89□□□□□ -0.99
ABCF1-207ENST00000542772 ROCK1Q13464 1354 aa8.89□□□□□ -0.99
ABCF1-207ENST00000542772 ADGRL2O95490 1459 aa8.89□□□□□ -0.99
ABCF1-207ENST00000542772 CHIC2Q9UKJ5 165 aa8.88□□□□□ -0.99
ABCF1-207ENST00000542772 C9orf84Q5VXU9 1444 aa8.88□□□□□ -0.99
ABCF1-207ENST00000542772 CROCC2H7BZ55 1655 aa8.88□□□□□ -0.99
ABCF1-207ENST00000542772 ANKRD30AQ9BXX3 1397 aa8.87□□□□□ -0.99
ABCF1-207ENST00000542772 HRCP23327 699 aa8.87□□□□□ -0.99
ABCF1-207ENST00000542772 DHX29Q7Z478 1369 aaKnown RBP8.86□□□□□ -0.99
ABCF1-207ENST00000542772 INO80Q9ULG1 1556 aaPredicted RBP8.86□□□□□ -0.99
ABCF1-207ENST00000542772 ATP7AQ04656 1500 aa8.86□□□□□ -0.99
ABCF1-207ENST00000542772 ATP10AO60312 1499 aa8.86□□□□□ -0.99
ABCF1-207ENST00000542772 ITGAEP38570 1179 aa8.86□□□□□ -0.99
ABCF1-207ENST00000542772 RRP7BPQ9NSQ0 103 aa8.86□□□□□ -0.99
ABCF1-207ENST00000542772 HECW2Q9P2P5 1572 aa8.86□□□□□ -0.99
ABCF1-207ENST00000542772 ZFYVE16Q7Z3T8 1539 aa8.85□□□□□ -0.99
ABCF1-207ENST00000542772 YEATS2Q9ULM3 1422 aa8.85□□□□□ -0.99
ABCF1-207ENST00000542772 PLXNC1O60486 1568 aa8.85□□□□□ -0.99
ABCF1-207ENST00000542772 NAIPQ13075 1403 aa8.84□□□□□ -0.99
ABCF1-207ENST00000542772 REREQ9P2R6 1566 aa8.84□□□□□ -0.99
ABCF1-207ENST00000542772 ACIN1Q9UKV3 1341 aaKnown RBP8.83□□□□□ -1
ABCF1-207ENST00000542772 DIP2CQ9Y2E4 1556 aa8.83□□□□□ -1
ABCF1-207ENST00000542772 HFM1A2PYH4 1435 aa8.83□□□□□ -1
ABCF1-207ENST00000542772 MYT1LQ9UL68 1186 aa8.83□□□□□ -1
ABCF1-207ENST00000542772 ADGBQ8N7X0 1667 aa8.83□□□□□ -1
ABCF1-207ENST00000542772 DUOX2Q9NRD8 1548 aa8.83□□□□□ -1
ABCF1-207ENST00000542772 KIF15Q9NS87 1388 aa8.83□□□□□ -1
ABCF1-207ENST00000542772 A2MP01023 1474 aa8.83□□□□□ -1
ABCF1-207ENST00000542772 AGLP35573 1532 aa8.82□□□□□ -1
ABCF1-207ENST00000542772 ABCA6Q8N139 1617 aa8.82□□□□□ -1
ABCF1-207ENST00000542772 SETD5Q9C0A6 1442 aa8.81□□□□□ -1
ABCF1-207ENST00000542772 PCGF6Q9BYE7 350 aa8.81□□□□□ -1
ABCF1-207ENST00000542772 PPP6R1Q9UPN7 881 aa8.81□□□□□ -1
ABCF1-207ENST00000542772 ERBINQ96RT1 1412 aa8.8□□□□□ -1
ABCF1-207ENST00000542772 ANKRD50Q9ULJ7 1429 aa8.8□□□□□ -1
ABCF1-207ENST00000542772 BCORL1Q5H9F3 1711 aa8.8□□□□□ -1
ABCF1-207ENST00000542772 ARHGEF40Q8TER5 1519 aa8.8□□□□□ -1
ABCF1-207ENST00000542772 KIF3BO15066 747 aa8.79□□□□□ -1
ABCF1-207ENST00000542772 SIGLEC1Q9BZZ2 1709 aa8.78□□□□□ -1
ABCF1-207ENST00000542772 EIF2AK4Q9P2K8 1649 aaKnown RBP8.78□□□□□ -1
ABCF1-207ENST00000542772 GCC2Q8IWJ2 1684 aa8.78□□□□□ -1
ABCF1-207ENST00000542772 RAB3GAP2Q9H2M9 1393 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms