RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 ZBTB7CA1YPR0 619 aa14.21□□□□□ -0.13
ERBB2-204ENST00000541774 SLC4A1APQ9BWU0 796 aaKnown RBP14.21□□□□□ -0.13
ERBB2-204ENST00000541774 CC2D2AQ9P2K1 1620 aa14.21□□□□□ -0.13
ERBB2-204ENST00000541774 SENP3Q9H4L4 574 aaPredicted RBP14.21□□□□□ -0.13
ERBB2-204ENST00000541774 TNNT3P45378 269 aaPredicted RBP14.2□□□□□ -0.14
ERBB2-204ENST00000541774 PLPPR3Q6T4P5 718 aa14.18□□□□□ -0.14
ERBB2-204ENST00000541774 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
ERBB2-204ENST00000541774 PLEKHD1A6NEE1 506 aa14.16□□□□□ -0.14
ERBB2-204ENST00000541774 SYNJ1O43426 1573 aa14.15□□□□□ -0.14
ERBB2-204ENST00000541774 FHOD3Q2V2M9 1422 aa14.15□□□□□ -0.14
ERBB2-204ENST00000541774 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
ERBB2-204ENST00000541774 VPS8Q8N3P4 1428 aa14.15□□□□□ -0.14
ERBB2-204ENST00000541774 IGF1RP08069 1367 aa14.14□□□□□ -0.15
ERBB2-204ENST00000541774 CHAF1AQ13111 956 aaPredicted RBP14.12□□□□□ -0.15
ERBB2-204ENST00000541774 CFDP1Q9UEE9 299 aaPredicted RBP14.11□□□□□ -0.15
ERBB2-204ENST00000541774 TSPY4P0CV99 314 aa14.11□□□□□ -0.15
ERBB2-204ENST00000541774 TSPY10P0CW01 314 aa14.11□□□□□ -0.15
ERBB2-204ENST00000541774 AQRO60306 1485 aaKnown RBP eCLIP14.1□□□□□ -0.158e-7■■■■□ 26
ERBB2-204ENST00000541774 PLCB2Q00722 1185 aa14.1□□□□□ -0.15
ERBB2-204ENST00000541774 MAP7D2Q96T17 732 aa14.1□□□□□ -0.15
ERBB2-204ENST00000541774 NUDCQ9Y266 331 aa14.1□□□□□ -0.15
ERBB2-204ENST00000541774 KDM2AQ9Y2K7 1162 aa14.1□□□□□ -0.15
ERBB2-204ENST00000541774 CFTRP13569 1480 aa14.1□□□□□ -0.15
ERBB2-204ENST00000541774 RBM10P98175 930 aaKnown RBP14.09□□□□□ -0.15
ERBB2-204ENST00000541774 TPM2P07951 284 aa14.09□□□□□ -0.15
ERBB2-204ENST00000541774 FRAT2O75474 233 aaPredicted RBP14.09□□□□□ -0.15
ERBB2-204ENST00000541774 CHGAP10645 457 aaKnown RBP14.08□□□□□ -0.16
ERBB2-204ENST00000541774 HSP90AB1P08238 724 aaKnown RBP14.07□□□□□ -0.16
ERBB2-204ENST00000541774 WDR43Q15061 677 aaKnown RBP eCLIP14.07□□□□□ -0.161e-5■■■■□ 24.6
ERBB2-204ENST00000541774 HSCBQ8IWL3 235 aa14.06□□□□□ -0.16
ERBB2-204ENST00000541774 ZNF771Q7L3S4 317 aaPredicted RBP14.06□□□□□ -0.16
ERBB2-204ENST00000541774 RCAN3Q9UKA8 241 aa14.06□□□□□ -0.16
ERBB2-204ENST00000541774 CCNB3Q8WWL7 1395 aa14.05□□□□□ -0.16
ERBB2-204ENST00000541774 MS4A1P11836 297 aa14.04□□□□□ -0.16
ERBB2-204ENST00000541774 JPH4Q96JJ6 628 aa14.04□□□□□ -0.16
ERBB2-204ENST00000541774 FOXD1Q16676 465 aa14.04□□□□□ -0.16
ERBB2-204ENST00000541774 GBP4Q96PP9 640 aa14.04□□□□□ -0.16
ERBB2-204ENST00000541774 KIAA2012Q0VF49 1180 aa14.03□□□□□ -0.16
ERBB2-204ENST00000541774 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.03□□□□□ -0.16
ERBB2-204ENST00000541774 BBXQ8WY36 941 aaPredicted RBP14.02□□□□□ -0.16
ERBB2-204ENST00000541774 CUX1P39880 1505 aa14.02□□□□□ -0.17
ERBB2-204ENST00000541774 TPRNQ4KMQ1 711 aa14.02□□□□□ -0.17
ERBB2-204ENST00000541774 RGL3Q3MIN7 710 aa14.01□□□□□ -0.17
ERBB2-204ENST00000541774 R3HCC1Q9Y3T6 440 aaKnown RBP14.01□□□□□ -0.17
ERBB2-204ENST00000541774 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
ERBB2-204ENST00000541774 MTERF4Q7Z6M4 381 aaKnown RBP14□□□□□ -0.17
ERBB2-204ENST00000541774 EXOC6Q8TAG9 804 aa14□□□□□ -0.17
ERBB2-204ENST00000541774 PDIA4P13667 645 aaKnown RBP14□□□□□ -0.17
ERBB2-204ENST00000541774 C11orf95C9JLR9 678 aaPredicted RBP13.99□□□□□ -0.17
ERBB2-204ENST00000541774 PDCL3Q9H2J4 239 aa13.99□□□□□ -0.17
ERBB2-204ENST00000541774 APPP05067 770 aa13.99□□□□□ -0.17
ERBB2-204ENST00000541774 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
ERBB2-204ENST00000541774 FAM161AQ3B820 660 aa13.98□□□□□ -0.17
ERBB2-204ENST00000541774 HMGXB3Q12766 1538 aa13.97□□□□□ -0.17
ERBB2-204ENST00000541774 MRE11P49959 708 aa13.97□□□□□ -0.17
ERBB2-204ENST00000541774 ZBED9Q6R2W3 1325 aa13.97□□□□□ -0.17
ERBB2-204ENST00000541774 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
ERBB2-204ENST00000541774 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
ERBB2-204ENST00000541774 ZHX1Q9UKY1 873 aaPredicted RBP13.96□□□□□ -0.18
ERBB2-204ENST00000541774 DHX57Q6P158 1386 aaKnown RBP13.95□□□□□ -0.18
ERBB2-204ENST00000541774 ESPNB1AK53 854 aa13.95□□□□□ -0.18
ERBB2-204ENST00000541774 PTMSP20962 102 aa13.95□□□□□ -0.18
ERBB2-204ENST00000541774 PPP1R15AO75807 674 aaPredicted RBP13.94□□□□□ -0.18
ERBB2-204ENST00000541774 HSPA5P11021 654 aaKnown RBP13.94□□□□□ -0.18
ERBB2-204ENST00000541774 DDX11L8A8MPP1 907 aa13.94□□□□□ -0.18
ERBB2-204ENST00000541774 PRDM10Q9NQV6 1147 aa13.93□□□□□ -0.18
ERBB2-204ENST00000541774 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
ERBB2-204ENST00000541774 TOPBP1Q92547 1522 aa13.92□□□□□ -0.18
ERBB2-204ENST00000541774 CALD1Q05682 793 aaKnown RBP13.9□□□□□ -0.18
ERBB2-204ENST00000541774 BACH2Q9BYV9 841 aa13.9□□□□□ -0.18
ERBB2-204ENST00000541774 CSPP1Q1MSJ5 1256 aa13.89□□□□□ -0.19
ERBB2-204ENST00000541774 ARAP1Q96P48 1450 aa13.89□□□□□ -0.19
ERBB2-204ENST00000541774 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
ERBB2-204ENST00000541774 HNRNPMP52272 730 aaKnown RBP eCLIP13.88□□□□□ -0.19
ERBB2-204ENST00000541774 FMN1Q68DA7 1419 aa13.88□□□□□ -0.19
ERBB2-204ENST00000541774 POGKQ9P215 609 aa13.88□□□□□ -0.19
ERBB2-204ENST00000541774 WASHC2AQ641Q2 1341 aa13.87□□□□□ -0.19
ERBB2-204ENST00000541774 TOP2BQ02880 1626 aa13.87□□□□□ -0.19
ERBB2-204ENST00000541774 RAB3GAP2Q9H2M9 1393 aa13.87□□□□□ -0.19
ERBB2-204ENST00000541774 BCL11BQ9C0K0 894 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-204ENST00000541774 ZNF644Q9H582 1327 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-204ENST00000541774 DDX49Q9Y6V7 483 aaKnown RBP13.86□□□□□ -0.19
ERBB2-204ENST00000541774 ARHGAP35Q9NRY4 1499 aa13.86□□□□□ -0.19
ERBB2-204ENST00000541774 KIF21BO75037 1637 aa13.86□□□□□ -0.19
ERBB2-204ENST00000541774 PLIN1O60240 522 aa13.86□□□□□ -0.19
ERBB2-204ENST00000541774 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
ERBB2-204ENST00000541774 CARMIL2Q6F5E8 1435 aa13.85□□□□□ -0.19
ERBB2-204ENST00000541774 PEG3Q9GZU2 1588 aa13.84□□□□□ -0.19
ERBB2-204ENST00000541774 SKOR2Q2VWA4 1001 aaPredicted RBP13.84□□□□□ -0.19
ERBB2-204ENST00000541774 TRAK2O60296 914 aa13.84□□□□□ -0.19
ERBB2-204ENST00000541774 MFAP1P55081 439 aaKnown RBP13.84□□□□□ -0.19
ERBB2-204ENST00000541774 CENPQQ7L2Z9 268 aaPredicted RBP13.84□□□□□ -0.19
ERBB2-204ENST00000541774 PRKRIP1Q9H875 184 aaPredicted RBP13.83□□□□□ -0.19
ERBB2-204ENST00000541774 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.19
ERBB2-204ENST00000541774 PRXQ9BXM0 1461 aa13.83□□□□□ -0.2
ERBB2-204ENST00000541774 ESF1Q9H501 851 aaKnown RBP13.83□□□□□ -0.2
ERBB2-204ENST00000541774 WASHC2CQ9Y4E1 1318 aa13.83□□□□□ -0.2
ERBB2-204ENST00000541774 CHMP5Q9NZZ3 219 aa13.83□□□□□ -0.2
ERBB2-204ENST00000541774 DRC7Q8IY82 874 aa13.82□□□□□ -0.2
ERBB2-204ENST00000541774 UQCRHLA0A096LP55 91 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms