RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 RASEFQ8IZ41 740 aa10.6□□□□□ -0.71
CLTCL1-206ENST00000540896 CLASP1Q7Z460 1538 aa10.59□□□□□ -0.71
CLTCL1-206ENST00000540896 TNIKQ9UKE5 1360 aa10.59□□□□□ -0.71
CLTCL1-206ENST00000540896 C7P10643 843 aa10.57□□□□□ -0.72
CLTCL1-206ENST00000540896 SLC39A7Q92504 469 aa10.57□□□□□ -0.72
CLTCL1-206ENST00000540896 ATMINO43313 823 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-206ENST00000540896 SGIP1Q9BQI5 828 aa10.56□□□□□ -0.72
CLTCL1-206ENST00000540896 KIAA0586Q9BVV6 1533 aa10.56□□□□□ -0.72
CLTCL1-206ENST00000540896 FAM212AQ96EL1 285 aa10.55□□□□□ -0.72
CLTCL1-206ENST00000540896 JPH4Q96JJ6 628 aa10.55□□□□□ -0.72
CLTCL1-206ENST00000540896 MAP3K13O43283 966 aa10.54□□□□□ -0.72
CLTCL1-206ENST00000540896 NUBP1P53384 320 aa10.54□□□□□ -0.72
CLTCL1-206ENST00000540896 PELP1Q8IZL8 1130 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-206ENST00000540896 IQGAP2Q13576 1575 aa10.52□□□□□ -0.73
CLTCL1-206ENST00000540896 SHROOM2Q13796 1616 aa10.51□□□□□ -0.73
CLTCL1-206ENST00000540896 CEP162Q5TB80 1403 aa10.51□□□□□ -0.73
CLTCL1-206ENST00000540896 CTTNBP2Q8WZ74 1663 aa10.51□□□□□ -0.73
CLTCL1-206ENST00000540896 TIE1P35590 1138 aa10.51□□□□□ -0.73
CLTCL1-206ENST00000540896 METRNQ9UJH8 293 aa10.51□□□□□ -0.73
CLTCL1-206ENST00000540896 ARHGEF11O15085 1522 aa10.51□□□□□ -0.73
CLTCL1-206ENST00000540896 PRG4Q92954 1404 aaPredicted RBP10.5□□□□□ -0.73
CLTCL1-206ENST00000540896 RIMBP3CA6NJZ7 1639 aa10.5□□□□□ -0.73
CLTCL1-206ENST00000540896 RIMBP3BA6NNM3 1639 aa10.5□□□□□ -0.73
CLTCL1-206ENST00000540896 RIMBP3Q9UFD9 1639 aa10.5□□□□□ -0.73
CLTCL1-206ENST00000540896 CLIP1P30622 1438 aa10.5□□□□□ -0.73
CLTCL1-206ENST00000540896 ERCC6L2Q5T890 1561 aa10.48□□□□□ -0.73
CLTCL1-206ENST00000540896 MAMSTRQ6ZN01 415 aa10.47□□□□□ -0.73
CLTCL1-206ENST00000540896 PCDHB13Q9Y5F0 798 aa10.47□□□□□ -0.73
CLTCL1-206ENST00000540896 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
CLTCL1-206ENST00000540896 CYB5RLQ6IPT4 315 aa10.46□□□□□ -0.73
CLTCL1-206ENST00000540896 P3H3Q8IVL6 736 aa10.46□□□□□ -0.73
CLTCL1-206ENST00000540896 CARMIL2Q6F5E8 1435 aa10.46□□□□□ -0.74
CLTCL1-206ENST00000540896 UGGT2Q9NYU1 1516 aa10.46□□□□□ -0.74
CLTCL1-206ENST00000540896 BMP2KQ9NSY1 1161 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-206ENST00000540896 DCAF8Q5TAQ9 597 aa10.44□□□□□ -0.74
CLTCL1-206ENST00000540896 KLHL34Q8N239 644 aa10.44□□□□□ -0.74
CLTCL1-206ENST00000540896 DISP1Q96F81 1524 aa10.43□□□□□ -0.74
CLTCL1-206ENST00000540896 ARAP1Q96P48 1450 aa10.43□□□□□ -0.74
CLTCL1-206ENST00000540896 TTBK1Q5TCY1 1321 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-206ENST00000540896 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-206ENST00000540896 OTUD5Q96G74 571 aa10.43□□□□□ -0.74
CLTCL1-206ENST00000540896 POTEB2H3BUK9 544 aa10.42□□□□□ -0.74
CLTCL1-206ENST00000540896 PTPRGP23470 1445 aa10.41□□□□□ -0.74
CLTCL1-206ENST00000540896 KIAA0556O60303 1618 aa10.4□□□□□ -0.74
CLTCL1-206ENST00000540896 ARHGAP35Q9NRY4 1499 aa10.39□□□□□ -0.75
CLTCL1-206ENST00000540896 TTLL13PA6NNM8 815 aa10.39□□□□□ -0.75
CLTCL1-206ENST00000540896 GSE1Q14687 1217 aa10.39□□□□□ -0.75
CLTCL1-206ENST00000540896 ATP1B4Q9UN42 357 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-206ENST00000540896 TRPC6Q9Y210 931 aa10.39□□□□□ -0.75
CLTCL1-206ENST00000540896 SAMD9Q5K651 1589 aa10.39□□□□□ -0.75
CLTCL1-206ENST00000540896 IER5LQ5T953 404 aa10.38□□□□□ -0.75
CLTCL1-206ENST00000540896 SEC24BO95487 1268 aa10.37□□□□□ -0.75
CLTCL1-206ENST00000540896 IFNL1Q8IU54 200 aa10.37□□□□□ -0.75
CLTCL1-206ENST00000540896 EFCAB5A4FU69 1503 aa10.37□□□□□ -0.75
CLTCL1-206ENST00000540896 FHOD3Q2V2M9 1422 aa10.36□□□□□ -0.75
CLTCL1-206ENST00000540896 SCUBE2Q9NQ36 999 aa10.36□□□□□ -0.75
CLTCL1-206ENST00000540896 VPS8Q8N3P4 1428 aa10.35□□□□□ -0.75
CLTCL1-206ENST00000540896 TMEM106CQ9BVX2 250 aa10.33□□□□□ -0.76
CLTCL1-206ENST00000540896 TRIM35Q9UPQ4 493 aa10.33□□□□□ -0.76
CLTCL1-206ENST00000540896 UACAQ9BZF9 1416 aa10.33□□□□□ -0.76
CLTCL1-206ENST00000540896 PYGBP11216 843 aa10.32□□□□□ -0.76
CLTCL1-206ENST00000540896 PPARGC1BQ86YN6 1023 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-206ENST00000540896 FMN1Q68DA7 1419 aa10.32□□□□□ -0.76
CLTCL1-206ENST00000540896 PLB1Q6P1J6 1458 aa10.3□□□□□ -0.76
CLTCL1-206ENST00000540896 ADCY10Q96PN6 1610 aa10.3□□□□□ -0.76
CLTCL1-206ENST00000540896 UHRF1BP1LA0JNW5 1464 aa10.3□□□□□ -0.76
CLTCL1-206ENST00000540896 ABCC2Q92887 1545 aa10.29□□□□□ -0.76
CLTCL1-206ENST00000540896 CHRM1P11229 460 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-206ENST00000540896 ABCA8O94911 1581 aa10.29□□□□□ -0.76
CLTCL1-206ENST00000540896 POTEJP0CG39 1038 aa10.28□□□□□ -0.76
CLTCL1-206ENST00000540896 ZNF467Q7Z7K2 595 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-206ENST00000540896 POTEFA5A3E0 1075 aa10.27□□□□□ -0.77
CLTCL1-206ENST00000540896 ARID3CA6NKF2 412 aa10.27□□□□□ -0.77
CLTCL1-206ENST00000540896 SPOCK2Q92563 424 aa10.27□□□□□ -0.77
CLTCL1-206ENST00000540896 RAPGEF6Q8TEU7 1601 aa10.26□□□□□ -0.77
CLTCL1-206ENST00000540896 CASKIN1Q8WXD9 1431 aa10.26□□□□□ -0.77
CLTCL1-206ENST00000540896 COLQQ9Y215 455 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-206ENST00000540896 KDM5BQ9UGL1 1544 aa10.24□□□□□ -0.77
CLTCL1-206ENST00000540896 PLCG2P16885 1265 aa10.24□□□□□ -0.77
CLTCL1-206ENST00000540896 NUP153P49790 1475 aaKnown RBP10.23□□□□□ -0.77
CLTCL1-206ENST00000540896 FYCO1Q9BQS8 1478 aa10.23□□□□□ -0.77
CLTCL1-206ENST00000540896 PCDHB8Q9UN66 801 aa10.23□□□□□ -0.77
CLTCL1-206ENST00000540896 ATP10BO94823 1461 aa10.23□□□□□ -0.77
CLTCL1-206ENST00000540896 ZCCHC11Q5TAX3 1644 aaKnown RBP10.22□□□□□ -0.77
CLTCL1-206ENST00000540896 PCF11O94913 1555 aaKnown RBP10.22□□□□□ -0.77
CLTCL1-206ENST00000540896 KANK4Q5T7N3 995 aaPredicted RBP10.21□□□□□ -0.77
CLTCL1-206ENST00000540896 MAPKBP1O60336 1514 aa10.21□□□□□ -0.78
CLTCL1-206ENST00000540896 HECW1Q76N89 1606 aa10.21□□□□□ -0.78
CLTCL1-206ENST00000540896 ASXL2Q76L83 1435 aa10.2□□□□□ -0.78
CLTCL1-206ENST00000540896 IFNLR1Q8IU57 520 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-206ENST00000540896 OCEL1Q9H607 264 aa10.2□□□□□ -0.78
CLTCL1-206ENST00000540896 CDK11AQ9UQ88 783 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-206ENST00000540896 EPRSP07814 1512 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-206ENST00000540896 PLEKHD1A6NEE1 506 aa10.18□□□□□ -0.78
CLTCL1-206ENST00000540896 IRX5P78411 483 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-206ENST00000540896 GOLGA2Q08379 1002 aa10.18□□□□□ -0.78
CLTCL1-206ENST00000540896 KCNH8Q96L42 1107 aa10.18□□□□□ -0.78
CLTCL1-206ENST00000540896 CIZ1Q9ULV3 898 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-206ENST00000540896 CDK13Q14004 1512 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-206ENST00000540896 MTUS2Q5JR59 1369 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms