RNA–Protein interactions for RNA: ENST00000540182.5

NLRC5-219, Transcript of NLR family CARD domain containing 5, humanhuman

TSL 1 (best)

Gene NLRC5, Length 3,617 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC5-219ENST00000540182 CARD11Q9BXL7 1154 aa12.75□□□□□ -0.37
NLRC5-219ENST00000540182 CARMIL1Q5VZK9 1371 aa12.75□□□□□ -0.37
NLRC5-219ENST00000540182 UBE2Q2Q8WVN8 375 aa12.74□□□□□ -0.37
NLRC5-219ENST00000540182 PKNOX2Q96KN3 472 aa12.73□□□□□ -0.37
NLRC5-219ENST00000540182 LRRC9Q6ZRR7 1453 aa12.72□□□□□ -0.37
NLRC5-219ENST00000540182 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
NLRC5-219ENST00000540182 C20orf194Q5TEA3 1177 aa12.72□□□□□ -0.37
NLRC5-219ENST00000540182 HMGXB3Q12766 1538 aa12.71□□□□□ -0.37
NLRC5-219ENST00000540182 POGKQ9P215 609 aa12.71□□□□□ -0.38
NLRC5-219ENST00000540182 USP35Q9P2H5 1018 aa12.71□□□□□ -0.38
NLRC5-219ENST00000540182 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
NLRC5-219ENST00000540182 GLIPR1L2Q4G1C9 344 aa12.69□□□□□ -0.38
NLRC5-219ENST00000540182 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.38
NLRC5-219ENST00000540182 DCAF11Q8TEB1 546 aa12.68□□□□□ -0.38
NLRC5-219ENST00000540182 PRXQ9BXM0 1461 aa12.68□□□□□ -0.38
NLRC5-219ENST00000540182 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
NLRC5-219ENST00000540182 PNISRQ8TF01 805 aaKnown RBP12.66□□□□□ -0.38
NLRC5-219ENST00000540182 FHAD1B1AJZ9 1412 aa12.66□□□□□ -0.38
NLRC5-219ENST00000540182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
NLRC5-219ENST00000540182 SENP3Q9H4L4 574 aaPredicted RBP12.65□□□□□ -0.38
NLRC5-219ENST00000540182 FMN1Q68DA7 1419 aa12.64□□□□□ -0.39
NLRC5-219ENST00000540182 CCDC146Q8IYE0 955 aa12.64□□□□□ -0.39
NLRC5-219ENST00000540182 PNNQ9H307 717 aaKnown RBP12.64□□□□□ -0.39
NLRC5-219ENST00000540182 PTPRKQ15262 1439 aa12.64□□□□□ -0.39
NLRC5-219ENST00000540182 UACAQ9BZF9 1416 aa12.63□□□□□ -0.39
NLRC5-219ENST00000540182 ZNF644Q9H582 1327 aaPredicted RBP12.63□□□□□ -0.39
NLRC5-219ENST00000540182 SMG6Q86US8 1419 aaKnown RBP12.63□□□□□ -0.39
NLRC5-219ENST00000540182 RSPH6AQ9H0K4 717 aa12.62□□□□□ -0.39
NLRC5-219ENST00000540182 FBLN2P98095 1184 aa12.62□□□□□ -0.39
NLRC5-219ENST00000540182 WDR43Q15061 677 aaKnown RBP eCLIP12.62□□□□□ -0.39
NLRC5-219ENST00000540182 FGD6Q6ZV73 1430 aa12.62□□□□□ -0.39
NLRC5-219ENST00000540182 IGF1RP08069 1367 aa12.62□□□□□ -0.39
NLRC5-219ENST00000540182 PKD2Q13563 968 aa12.61□□□□□ -0.39
NLRC5-219ENST00000540182 TIAM1Q13009 1591 aa12.61□□□□□ -0.39
NLRC5-219ENST00000540182 HSP90AA2PQ14568 343 aaPredicted RBP12.61□□□□□ -0.39
NLRC5-219ENST00000540182 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
NLRC5-219ENST00000540182 USP47Q96K76 1375 aa12.6□□□□□ -0.39
NLRC5-219ENST00000540182 HSP90AA1P07900 732 aaKnown RBP12.6□□□□□ -0.39
NLRC5-219ENST00000540182 TNNT2P45379 298 aaPredicted RBP12.59□□□□□ -0.39
NLRC5-219ENST00000540182 FAM161AQ3B820 660 aa12.58□□□□□ -0.4
NLRC5-219ENST00000540182 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.4
NLRC5-219ENST00000540182 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
NLRC5-219ENST00000540182 BCL2L13Q9BXK5 485 aa12.58□□□□□ -0.4
NLRC5-219ENST00000540182 ZMYND15Q9H091 742 aa12.58□□□□□ -0.4
NLRC5-219ENST00000540182 RRAGDQ9NQL2 400 aaPredicted RBP12.57□□□□□ -0.4
NLRC5-219ENST00000540182 WASHC2CQ9Y4E1 1318 aa12.57□□□□□ -0.4
NLRC5-219ENST00000540182 ATAD2BQ9ULI0 1458 aa12.57□□□□□ -0.4
NLRC5-219ENST00000540182 PANK2Q9BZ23 570 aa12.57□□□□□ -0.4
NLRC5-219ENST00000540182 UPF2Q9HAU5 1272 aaKnown RBP12.56□□□□□ -0.4
NLRC5-219ENST00000540182 MS4A1P11836 297 aa12.56□□□□□ -0.4
NLRC5-219ENST00000540182 NAIPQ13075 1403 aa12.56□□□□□ -0.4
NLRC5-219ENST00000540182 TRIM44Q96DX7 344 aaPredicted RBP12.56□□□□□ -0.4
NLRC5-219ENST00000540182 BECN1Q14457 450 aa12.55□□□□□ -0.4
NLRC5-219ENST00000540182 A0A0U1RQG5 324 aaPredicted RBP12.55□□□□□ -0.4
NLRC5-219ENST00000540182 CFTRP13569 1480 aa12.54□□□□□ -0.4
NLRC5-219ENST00000540182 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.54□□□□□ -0.4
NLRC5-219ENST00000540182 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
NLRC5-219ENST00000540182 COG6Q9Y2V7 657 aa12.53□□□□□ -0.4
NLRC5-219ENST00000540182 GOLGA6L3A6NEY3 463 aa12.52□□□□□ -0.4
NLRC5-219ENST00000540182 FAM43AQ8N2R8 423 aa12.52□□□□□ -0.4
NLRC5-219ENST00000540182 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.4
NLRC5-219ENST00000540182 NLRP13Q86W25 1043 aa12.52□□□□□ -0.41
NLRC5-219ENST00000540182 NCOA1Q15788 1441 aa12.52□□□□□ -0.41
NLRC5-219ENST00000540182 BCAR3O75815 825 aa12.51□□□□□ -0.41
NLRC5-219ENST00000540182 NCLP19338 710 aaKnown RBP12.51□□□□□ -0.41
NLRC5-219ENST00000540182 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
NLRC5-219ENST00000540182 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
NLRC5-219ENST00000540182 SEC24BO95487 1268 aa12.5□□□□□ -0.41
NLRC5-219ENST00000540182 AMER1Q5JTC6 1135 aaPredicted RBP12.5□□□□□ -0.41
NLRC5-219ENST00000540182 ADAMTS8Q9UP79 889 aa12.5□□□□□ -0.41
NLRC5-219ENST00000540182 CUX1P39880 1505 aa12.5□□□□□ -0.41
NLRC5-219ENST00000540182 RRP7AQ9Y3A4 280 aaKnown RBP12.5□□□□□ -0.41
NLRC5-219ENST00000540182 HFM1A2PYH4 1435 aa12.5□□□□□ -0.41
NLRC5-219ENST00000540182 PANK3Q9H999 370 aa12.5□□□□□ -0.41
NLRC5-219ENST00000540182 PCF11O94913 1555 aaKnown RBP12.49□□□□□ -0.41
NLRC5-219ENST00000540182 PANK1Q8TE04 598 aa12.49□□□□□ -0.41
NLRC5-219ENST00000540182 NCAPD3P42695 1498 aa12.49□□□□□ -0.41
NLRC5-219ENST00000540182 TDRD9Q8NDG6 1382 aaKnown RBP12.49□□□□□ -0.41
NLRC5-219ENST00000540182 TOP2BQ02880 1626 aa12.49□□□□□ -0.41
NLRC5-219ENST00000540182 RBM10P98175 930 aaKnown RBP12.49□□□□□ -0.41
NLRC5-219ENST00000540182 KTN1Q86UP2 1357 aaKnown RBP12.49□□□□□ -0.41
NLRC5-219ENST00000540182 CENPQQ7L2Z9 268 aaPredicted RBP12.48□□□□□ -0.41
NLRC5-219ENST00000540182 CFDP1Q9UEE9 299 aaPredicted RBP12.48□□□□□ -0.41
NLRC5-219ENST00000540182 L1TD1Q5T7N2 865 aaKnown RBP12.48□□□□□ -0.41
NLRC5-219ENST00000540182 KIF15Q9NS87 1388 aa12.47□□□□□ -0.41
NLRC5-219ENST00000540182 NCOA2Q15596 1464 aa12.46□□□□□ -0.41
NLRC5-219ENST00000540182 RALBP1Q15311 655 aa12.46□□□□□ -0.41
NLRC5-219ENST00000540182 NBPF1Q3BBV0 1214 aa12.46□□□□□ -0.42
NLRC5-219ENST00000540182 C8orf34Q49A92 452 aa12.45□□□□□ -0.42
NLRC5-219ENST00000540182 APAF1O14727 1248 aa12.45□□□□□ -0.42
NLRC5-219ENST00000540182 MYH16Q9H6N6 1097 aa12.45□□□□□ -0.42
NLRC5-219ENST00000540182 KNSTRNQ9Y448 316 aa12.45□□□□□ -0.42
NLRC5-219ENST00000540182 ROCK2O75116 1388 aaKnown RBP12.45□□□□□ -0.42
NLRC5-219ENST00000540182 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
NLRC5-219ENST00000540182 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
NLRC5-219ENST00000540182 MYOM3Q5VTT5 1437 aa12.44□□□□□ -0.42
NLRC5-219ENST00000540182 RNF123Q5XPI4 1314 aa12.43□□□□□ -0.42
NLRC5-219ENST00000540182 FAM13BQ9NYF5 915 aa12.42□□□□□ -0.42
NLRC5-219ENST00000540182 XRCC6P12956 609 aaKnown RBP eCLIP12.42□□□□□ -0.42
NLRC5-219ENST00000540182 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms