RNA–Protein interactions for RNA: ENST00000540182.5

NLRC5-219, Transcript of NLR family CARD domain containing 5, humanhuman

TSL 1 (best)

Gene NLRC5, Length 3,617 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC5-219ENST00000540182 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.33
NLRC5-219ENST00000540182 SUPT5HO00267 1087 aaKnown RBP16.56■□□□□ 0.24
NLRC5-219ENST00000540182 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
NLRC5-219ENST00000540182 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
NLRC5-219ENST00000540182 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
NLRC5-219ENST00000540182 HRCP23327 699 aa16.16■□□□□ 0.18
NLRC5-219ENST00000540182 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
NLRC5-219ENST00000540182 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
NLRC5-219ENST00000540182 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
NLRC5-219ENST00000540182 CHIC1Q5VXU3 224 aa15.63■□□□□ 0.09
NLRC5-219ENST00000540182 FAM9AQ8IZU1 332 aaPredicted RBP15.54■□□□□ 0.08
NLRC5-219ENST00000540182 MYO15BQ96JP2 1530 aa15.52■□□□□ 0.08
NLRC5-219ENST00000540182 PELP1Q8IZL8 1130 aaKnown RBP15.52■□□□□ 0.07
NLRC5-219ENST00000540182 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
NLRC5-219ENST00000540182 TTBK1Q5TCY1 1321 aaPredicted RBP15.45■□□□□ 0.06
NLRC5-219ENST00000540182 TRIM26Q12899 539 aaPredicted RBP15.34■□□□□ 0.05
NLRC5-219ENST00000540182 YTHDC1Q96MU7 727 aaKnown RBP15.3■□□□□ 0.04
NLRC5-219ENST00000540182 GTF3C3Q9Y5Q9 886 aa15.2■□□□□ 0.02
NLRC5-219ENST00000540182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.16■□□□□ 0.02
NLRC5-219ENST00000540182 CCER1Q8TC90 406 aaPredicted RBP15.15■□□□□ 0.02
NLRC5-219ENST00000540182 NEUROD1Q13562 356 aa15.14■□□□□ 0.01
NLRC5-219ENST00000540182 ZEB1P37275 1124 aaPredicted RBP15.11■□□□□ 0.01
NLRC5-219ENST00000540182 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
NLRC5-219ENST00000540182 CENPBP07199 599 aaPredicted RBP15.04■□□□□ -0
NLRC5-219ENST00000540182 ACIN1Q9UKV3 1341 aaKnown RBP15.03■□□□□ -0
NLRC5-219ENST00000540182 TRIM41Q8WV44 630 aa15□□□□□ -0.01
NLRC5-219ENST00000540182 DIEXFQ68CQ4 756 aaKnown RBP14.95□□□□□ -0.02
NLRC5-219ENST00000540182 DCAF1Q9Y4B6 1507 aa14.84□□□□□ -0.03
NLRC5-219ENST00000540182 MYT1Q01538 1121 aa14.82□□□□□ -0.04
NLRC5-219ENST00000540182 RANGAP1P46060 587 aaPredicted RBP14.7□□□□□ -0.06
NLRC5-219ENST00000540182 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
NLRC5-219ENST00000540182 BCANQ96GW7 911 aa14.59□□□□□ -0.07
NLRC5-219ENST00000540182 MIER1Q8N108 512 aa14.55□□□□□ -0.08
NLRC5-219ENST00000540182 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
NLRC5-219ENST00000540182 UBTFP17480 764 aaKnown RBP14.46□□□□□ -0.09
NLRC5-219ENST00000540182 ZCCHC6Q5VYS8 1495 aaKnown RBP14.4□□□□□ -0.1
NLRC5-219ENST00000540182 BCL11AQ9H165 835 aa14.33□□□□□ -0.12
NLRC5-219ENST00000540182 ITGAEP38570 1179 aa14.27□□□□□ -0.13
NLRC5-219ENST00000540182 APLP2Q06481 763 aa14.26□□□□□ -0.13
NLRC5-219ENST00000540182 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
NLRC5-219ENST00000540182 SUPT16HQ9Y5B9 1047 aaKnown RBP14.21□□□□□ -0.14
NLRC5-219ENST00000540182 ERICH6Q7L0X2 663 aa14.2□□□□□ -0.14
NLRC5-219ENST00000540182 ANP32EQ9BTT0 268 aa14.19□□□□□ -0.14
NLRC5-219ENST00000540182 FKBP8Q14318 412 aa14.15□□□□□ -0.14
NLRC5-219ENST00000540182 TSHZ2Q9NRE2 1034 aa14.13□□□□□ -0.15
NLRC5-219ENST00000540182 NEFLP07196 543 aa14.1□□□□□ -0.15
NLRC5-219ENST00000540182 KCNH8Q96L42 1107 aa14.09□□□□□ -0.15
NLRC5-219ENST00000540182 HIRIP3Q9BW71 556 aaPredicted RBP14.06□□□□□ -0.16
NLRC5-219ENST00000540182 TRIM52Q96A61 297 aa14.05□□□□□ -0.16
NLRC5-219ENST00000540182 IRX6P78412 446 aaPredicted RBP14.04□□□□□ -0.16
NLRC5-219ENST00000540182 CNGB1Q14028 1251 aaPredicted RBP14.04□□□□□ -0.16
NLRC5-219ENST00000540182 RSF1Q96T23 1441 aaPredicted RBP14□□□□□ -0.17
NLRC5-219ENST00000540182 RB1CC1Q8TDY2 1594 aa13.97□□□□□ -0.17
NLRC5-219ENST00000540182 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.18
NLRC5-219ENST00000540182 ATP1B4Q9UN42 357 aaPredicted RBP13.92□□□□□ -0.18
NLRC5-219ENST00000540182 SCRIBQ14160 1630 aa13.92□□□□□ -0.18
NLRC5-219ENST00000540182 CEP162Q5TB80 1403 aa13.9□□□□□ -0.18
NLRC5-219ENST00000540182 RBM19Q9Y4C8 960 aaKnown RBP13.89□□□□□ -0.19
NLRC5-219ENST00000540182 NBR1Q14596 966 aa13.89□□□□□ -0.19
NLRC5-219ENST00000540182 SENP3-EIF4A1A0A087X0R7 540 aa13.85□□□□□ -0.19
NLRC5-219ENST00000540182 SOGA1O94964 1423 aa13.79□□□□□ -0.2
NLRC5-219ENST00000540182 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
NLRC5-219ENST00000540182 CECR2Q9BXF3 1484 aa13.75□□□□□ -0.21
NLRC5-219ENST00000540182 UNC13AQ9UPW8 1703 aa13.75□□□□□ -0.21
NLRC5-219ENST00000540182 CDK11AQ9UQ88 783 aaPredicted RBP13.74□□□□□ -0.21
NLRC5-219ENST00000540182 ABCC8Q09428 1581 aa13.72□□□□□ -0.21
NLRC5-219ENST00000540182 HNRNPUQ00839 825 aaKnown RBP eCLIP13.71□□□□□ -0.21
NLRC5-219ENST00000540182 CCDC88BA6NC98 1476 aa13.7□□□□□ -0.22
NLRC5-219ENST00000540182 FAM50AQ14320 339 aaKnown RBP13.7□□□□□ -0.22
NLRC5-219ENST00000540182 SIN3AQ96ST3 1273 aa13.69□□□□□ -0.22
NLRC5-219ENST00000540182 ANP32CO43423 234 aa13.69□□□□□ -0.22
NLRC5-219ENST00000540182 POLR3GLQ9BT43 218 aa13.68□□□□□ -0.22
NLRC5-219ENST00000540182 CCDC136Q96JN2 1154 aa13.68□□□□□ -0.22
NLRC5-219ENST00000540182 RUSC2Q8N2Y8 1516 aa13.68□□□□□ -0.22
NLRC5-219ENST00000540182 MSH5O43196 834 aa13.66□□□□□ -0.22
NLRC5-219ENST00000540182 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
NLRC5-219ENST00000540182 NACADO15069 1562 aa13.66□□□□□ -0.22
NLRC5-219ENST00000540182 ABCC9O60706 1549 aa13.65□□□□□ -0.22
NLRC5-219ENST00000540182 DEKP35659 375 aaKnown RBP13.65□□□□□ -0.22
NLRC5-219ENST00000540182 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
NLRC5-219ENST00000540182 NPM2Q86SE8 214 aaKnown RBP13.63□□□□□ -0.23
NLRC5-219ENST00000540182 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.61□□□□□ -0.23
NLRC5-219ENST00000540182 B4GALNT3Q6L9W6 998 aa13.6□□□□□ -0.23
NLRC5-219ENST00000540182 ANO8Q9HCE9 1232 aaPredicted RBP13.6□□□□□ -0.23
NLRC5-219ENST00000540182 CLIP1P30622 1438 aa13.6□□□□□ -0.23
NLRC5-219ENST00000540182 KANK4Q5T7N3 995 aaPredicted RBP13.59□□□□□ -0.23
NLRC5-219ENST00000540182 TNIKQ9UKE5 1360 aa13.59□□□□□ -0.23
NLRC5-219ENST00000540182 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
NLRC5-219ENST00000540182 FAM9BQ8IZU0 186 aa13.58□□□□□ -0.23
NLRC5-219ENST00000540182 P3H3Q8IVL6 736 aa13.57□□□□□ -0.24
NLRC5-219ENST00000540182 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
NLRC5-219ENST00000540182 MROH2BQ7Z745 1585 aa13.56□□□□□ -0.24
NLRC5-219ENST00000540182 EIF5BO60841 1220 aaKnown RBP13.56□□□□□ -0.24
NLRC5-219ENST00000540182 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
NLRC5-219ENST00000540182 DHX57Q6P158 1386 aaKnown RBP13.51□□□□□ -0.25
NLRC5-219ENST00000540182 WIZO95785 1651 aa13.5□□□□□ -0.25
NLRC5-219ENST00000540182 BAZ1BQ9UIG0 1483 aaKnown RBP13.5□□□□□ -0.25
NLRC5-219ENST00000540182 WRNQ14191 1432 aaPredicted RBP eCLIP13.48□□□□□ -0.25
NLRC5-219ENST00000540182 GOLGA3Q08378 1498 aa13.46□□□□□ -0.25
NLRC5-219ENST00000540182 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms