RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 TIMELESSQ9UNS1 1208 aa18.39■□□□□ 0.54
DDX55-206ENST00000539934 ATP10BO94823 1461 aa18.39■□□□□ 0.53
DDX55-206ENST00000539934 ARAP3Q8WWN8 1544 aa18.38■□□□□ 0.53
DDX55-206ENST00000539934 ADAMTSL3P82987 1691 aa18.37■□□□□ 0.53
DDX55-206ENST00000539934 MADDQ8WXG6 1647 aa18.35■□□□□ 0.53
DDX55-206ENST00000539934 NEFLP07196 543 aa18.35■□□□□ 0.53
DDX55-206ENST00000539934 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.53
DDX55-206ENST00000539934 ERICH6BQ5W0A0 696 aa18.33■□□□□ 0.53
DDX55-206ENST00000539934 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
DDX55-206ENST00000539934 PDIA4P13667 645 aaKnown RBP18.32■□□□□ 0.52
DDX55-206ENST00000539934 MLECQ14165 292 aa18.31■□□□□ 0.52
DDX55-206ENST00000539934 BCORL1Q5H9F3 1711 aa18.3■□□□□ 0.52
DDX55-206ENST00000539934 ABCA9Q8IUA7 1624 aa18.29■□□□□ 0.52
DDX55-206ENST00000539934 ARHGAP35Q9NRY4 1499 aa18.29■□□□□ 0.52
DDX55-206ENST00000539934 FRMPD1Q5SYB0 1578 aa18.28■□□□□ 0.52
DDX55-206ENST00000539934 RIMS1Q86UR5 1692 aaKnown RBP18.28■□□□□ 0.52
DDX55-206ENST00000539934 NEO1Q92859 1461 aa18.22■□□□□ 0.51
DDX55-206ENST00000539934 PHLDB1Q86UU1 1377 aa18.22■□□□□ 0.51
DDX55-206ENST00000539934 CERKQ8TCT0 537 aa18.21■□□□□ 0.51
DDX55-206ENST00000539934 PDE4CQ08493 712 aa18.21■□□□□ 0.5
DDX55-206ENST00000539934 ILDR2Q71H61 639 aa18.21■□□□□ 0.5
DDX55-206ENST00000539934 RAPGEF6Q8TEU7 1601 aa18.2■□□□□ 0.5
DDX55-206ENST00000539934 YEATS2Q9ULM3 1422 aa18.19■□□□□ 0.5
DDX55-206ENST00000539934 SIGLEC1Q9BZZ2 1709 aa18.19■□□□□ 0.5
DDX55-206ENST00000539934 NUP153P49790 1475 aaKnown RBP18.18■□□□□ 0.5
DDX55-206ENST00000539934 HOMEZQ8IX15 550 aa18.18■□□□□ 0.5
DDX55-206ENST00000539934 FHOD3Q2V2M9 1422 aa18.18■□□□□ 0.5
DDX55-206ENST00000539934 DENND4BO75064 1496 aaPredicted RBP18.17■□□□□ 0.5
DDX55-206ENST00000539934 CEBPAP49715 358 aaPredicted RBP18.17■□□□□ 0.5
DDX55-206ENST00000539934 AKNAQ7Z591 1439 aa18.17■□□□□ 0.5
DDX55-206ENST00000539934 PLEKHD1A6NEE1 506 aa18.16■□□□□ 0.5
DDX55-206ENST00000539934 SALL2Q9Y467 1007 aaPredicted RBP18.16■□□□□ 0.5
DDX55-206ENST00000539934 ARHGEF40Q8TER5 1519 aa18.16■□□□□ 0.5
DDX55-206ENST00000539934 DISP3Q9P2K9 1392 aa18.15■□□□□ 0.5
DDX55-206ENST00000539934 FANCAO15360 1455 aa18.14■□□□□ 0.5
DDX55-206ENST00000539934 EFCAB5A4FU69 1503 aa18.14■□□□□ 0.49
DDX55-206ENST00000539934 RICTORQ6R327 1708 aa18.14■□□□□ 0.49
DDX55-206ENST00000539934 SAMD9Q5K651 1589 aa18.13■□□□□ 0.49
DDX55-206ENST00000539934 MYT1LQ9UL68 1186 aa18.12■□□□□ 0.49
DDX55-206ENST00000539934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.1■□□□□ 0.49
DDX55-206ENST00000539934 TTC37Q6PGP7 1564 aa18.09■□□□□ 0.49
DDX55-206ENST00000539934 ATP1B4Q9UN42 357 aaPredicted RBP18.09■□□□□ 0.49
DDX55-206ENST00000539934 POGZQ7Z3K3 1410 aa18.08■□□□□ 0.49
DDX55-206ENST00000539934 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.48
DDX55-206ENST00000539934 FER1L4A9Z1Z3 1794 aa18.05■□□□□ 0.48
DDX55-206ENST00000539934 HECW1Q76N89 1606 aa18.05■□□□□ 0.48
DDX55-206ENST00000539934 SCAPERQ9BY12 1400 aa18.05■□□□□ 0.48
DDX55-206ENST00000539934 CDK13Q14004 1512 aaKnown RBP18.04■□□□□ 0.48
DDX55-206ENST00000539934 KANK4Q5T7N3 995 aaPredicted RBP18.04■□□□□ 0.48
DDX55-206ENST00000539934 TIAM1Q13009 1591 aa18.02■□□□□ 0.48
DDX55-206ENST00000539934 SOCS7O14512 581 aa18.01■□□□□ 0.47
DDX55-206ENST00000539934 MAP3K1Q13233 1512 aa18■□□□□ 0.47
DDX55-206ENST00000539934 ZMYM4Q5VZL5 1548 aa18■□□□□ 0.47
DDX55-206ENST00000539934 FGD1P98174 961 aa17.99■□□□□ 0.47
DDX55-206ENST00000539934 FMN1Q68DA7 1419 aa17.99■□□□□ 0.47
DDX55-206ENST00000539934 AFAP1Q8N556 730 aa17.99■□□□□ 0.47
DDX55-206ENST00000539934 TULP1O00294 542 aaPredicted RBP17.98■□□□□ 0.47
DDX55-206ENST00000539934 FYCO1Q9BQS8 1478 aa17.98■□□□□ 0.47
DDX55-206ENST00000539934 CFAP74Q9C0B2 1584 aa17.98■□□□□ 0.47
DDX55-206ENST00000539934 CASKIN1Q8WXD9 1431 aa17.96■□□□□ 0.47
DDX55-206ENST00000539934 CCDC136Q96JN2 1154 aa17.96■□□□□ 0.47
DDX55-206ENST00000539934 STRCQ7RTU9 1775 aa17.96■□□□□ 0.47
DDX55-206ENST00000539934 ATP10AO60312 1499 aa17.95■□□□□ 0.46
DDX55-206ENST00000539934 MAGI2Q86UL8 1455 aa17.94■□□□□ 0.46
DDX55-206ENST00000539934 PLCH2O75038 1416 aa17.94■□□□□ 0.46
DDX55-206ENST00000539934 ARHGEF12Q9NZN5 1544 aa17.94■□□□□ 0.46
DDX55-206ENST00000539934 TAF7LQ5H9L4 462 aa17.94■□□□□ 0.46
DDX55-206ENST00000539934 PREX1Q8TCU6 1659 aa17.93■□□□□ 0.46
DDX55-206ENST00000539934 LRRC9Q6ZRR7 1453 aa17.92■□□□□ 0.46
DDX55-206ENST00000539934 C9orf84Q5VXU9 1444 aa17.92■□□□□ 0.46
DDX55-206ENST00000539934 EFCAB2Q5VUJ9 269 aa17.91■□□□□ 0.46
DDX55-206ENST00000539934 UHRF1BP1Q6BDS2 1440 aa17.91■□□□□ 0.46
DDX55-206ENST00000539934 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
DDX55-206ENST00000539934 DMRT2Q9Y5R5 561 aa17.9■□□□□ 0.46
DDX55-206ENST00000539934 TSHZ2Q9NRE2 1034 aa17.88■□□□□ 0.45
DDX55-206ENST00000539934 RRBP1Q9P2E9 1410 aaKnown RBP17.87■□□□□ 0.45
DDX55-206ENST00000539934 KIF14Q15058 1648 aa17.87■□□□□ 0.45
DDX55-206ENST00000539934 CLSPNQ9HAW4 1339 aa17.87■□□□□ 0.45
DDX55-206ENST00000539934 SPATA31D1Q6ZQQ2 1576 aa17.86■□□□□ 0.45
DDX55-206ENST00000539934 AMER1Q5JTC6 1135 aaPredicted RBP17.86■□□□□ 0.45
DDX55-206ENST00000539934 ESF1Q9H501 851 aaKnown RBP17.84■□□□□ 0.45
DDX55-206ENST00000539934 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
DDX55-206ENST00000539934 ARHGAP5Q13017 1502 aa17.84■□□□□ 0.45
DDX55-206ENST00000539934 MYO5CQ9NQX4 1742 aa17.84■□□□□ 0.45
DDX55-206ENST00000539934 SETD1BQ9UPS6 1966 aaKnown RBP17.83■□□□□ 0.44
DDX55-206ENST00000539934 CCNB3Q8WWL7 1395 aa17.83■□□□□ 0.44
DDX55-206ENST00000539934 ZNF518AQ6AHZ1 1483 aa17.82■□□□□ 0.44
DDX55-206ENST00000539934 BCL11BQ9C0K0 894 aaPredicted RBP17.82■□□□□ 0.44
DDX55-206ENST00000539934 C3P01024 1663 aa17.81■□□□□ 0.44
DDX55-206ENST00000539934 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
DDX55-206ENST00000539934 CDK11AQ9UQ88 783 aaPredicted RBP17.79■□□□□ 0.44
DDX55-206ENST00000539934 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
DDX55-206ENST00000539934 LTBP4Q8N2S1 1624 aa17.78■□□□□ 0.44
DDX55-206ENST00000539934 ZNF335Q9H4Z2 1342 aaPredicted RBP17.78■□□□□ 0.44
DDX55-206ENST00000539934 TRAPPC8Q9Y2L5 1435 aa17.78■□□□□ 0.44
DDX55-206ENST00000539934 MTUS2Q5JR59 1369 aa17.77■□□□□ 0.44
DDX55-206ENST00000539934 ABCA6Q8N139 1617 aa17.77■□□□□ 0.44
DDX55-206ENST00000539934 CCDC18Q5T9S5 1454 aa17.77■□□□□ 0.43
DDX55-206ENST00000539934 PTPRTO14522 1441 aa17.76■□□□□ 0.43
DDX55-206ENST00000539934 UBAP1LF5GYI3 381 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms