RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 ERICH3Q5RHP9 1530 aa8.39□□□□□ -1.07
LINC02408-202ENST00000538573 CARMIL1Q5VZK9 1371 aa8.39□□□□□ -1.07
LINC02408-202ENST00000538573 TIE1P35590 1138 aa8.39□□□□□ -1.07
LINC02408-202ENST00000538573 NUBP1P53384 320 aa8.39□□□□□ -1.07
LINC02408-202ENST00000538573 KLHL34Q8N239 644 aa8.39□□□□□ -1.07
LINC02408-202ENST00000538573 CUL7Q14999 1698 aa8.38□□□□□ -1.07
LINC02408-202ENST00000538573 UBTFP17480 764 aaKnown RBP8.38□□□□□ -1.07
LINC02408-202ENST00000538573 SGIP1Q9BQI5 828 aa8.38□□□□□ -1.07
LINC02408-202ENST00000538573 KIF21BO75037 1637 aa8.38□□□□□ -1.07
LINC02408-202ENST00000538573 BMP2KQ9NSY1 1161 aaPredicted RBP8.37□□□□□ -1.07
LINC02408-202ENST00000538573 PRXQ9BXM0 1461 aa8.37□□□□□ -1.07
LINC02408-202ENST00000538573 TRPC6Q9Y210 931 aa8.36□□□□□ -1.07
LINC02408-202ENST00000538573 GOLGA3Q08378 1498 aa8.36□□□□□ -1.07
LINC02408-202ENST00000538573 SNAPC4Q5SXM2 1469 aa8.36□□□□□ -1.07
LINC02408-202ENST00000538573 RAPGEF2Q9Y4G8 1499 aa8.36□□□□□ -1.07
LINC02408-202ENST00000538573 SEC24BO95487 1268 aa8.35□□□□□ -1.07
LINC02408-202ENST00000538573 FHAD1B1AJZ9 1412 aa8.35□□□□□ -1.07
LINC02408-202ENST00000538573 POTEJP0CG39 1038 aa8.34□□□□□ -1.07
LINC02408-202ENST00000538573 CHMP7Q8WUX9 453 aaPredicted RBP8.34□□□□□ -1.07
LINC02408-202ENST00000538573 ADAMTS12P58397 1594 aa8.34□□□□□ -1.07
LINC02408-202ENST00000538573 MAGI1Q96QZ7 1491 aaPredicted RBP8.33□□□□□ -1.08
LINC02408-202ENST00000538573 TTLL13PA6NNM8 815 aa8.32□□□□□ -1.08
LINC02408-202ENST00000538573 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
LINC02408-202ENST00000538573 CDAN1Q8IWY9 1227 aa8.32□□□□□ -1.08
LINC02408-202ENST00000538573 RANGAP1P46060 587 aaPredicted RBP8.31□□□□□ -1.08
LINC02408-202ENST00000538573 TNIKQ9UKE5 1360 aa8.31□□□□□ -1.08
LINC02408-202ENST00000538573 SYNJ2O15056 1496 aa8.31□□□□□ -1.08
LINC02408-202ENST00000538573 IFNL1Q8IU54 200 aa8.3□□□□□ -1.08
LINC02408-202ENST00000538573 TRIM35Q9UPQ4 493 aa8.3□□□□□ -1.08
LINC02408-202ENST00000538573 PYGBP11216 843 aa8.29□□□□□ -1.08
LINC02408-202ENST00000538573 VASPP50552 380 aaPredicted RBP8.29□□□□□ -1.08
LINC02408-202ENST00000538573 TMEM106CQ9BVX2 250 aa8.29□□□□□ -1.08
LINC02408-202ENST00000538573 GRIN2AQ12879 1464 aa8.29□□□□□ -1.08
LINC02408-202ENST00000538573 CHD1O14646 1710 aa8.29□□□□□ -1.08
LINC02408-202ENST00000538573 CTTNBP2Q8WZ74 1663 aa8.27□□□□□ -1.08
LINC02408-202ENST00000538573 GSE1Q14687 1217 aa8.27□□□□□ -1.09
LINC02408-202ENST00000538573 IER5LQ5T953 404 aa8.25□□□□□ -1.09
LINC02408-202ENST00000538573 CEP162Q5TB80 1403 aa8.25□□□□□ -1.09
LINC02408-202ENST00000538573 CEP170Q5SW79 1584 aa8.24□□□□□ -1.09
LINC02408-202ENST00000538573 CLIP1P30622 1438 aa8.23□□□□□ -1.09
LINC02408-202ENST00000538573 POTEFA5A3E0 1075 aa8.23□□□□□ -1.09
LINC02408-202ENST00000538573 PLCG2P16885 1265 aa8.23□□□□□ -1.09
LINC02408-202ENST00000538573 KIAA0586Q9BVV6 1533 aa8.23□□□□□ -1.09
LINC02408-202ENST00000538573 NUP160Q12769 1436 aa8.22□□□□□ -1.09
LINC02408-202ENST00000538573 P3H3Q8IVL6 736 aa8.22□□□□□ -1.09
LINC02408-202ENST00000538573 COLQQ9Y215 455 aaPredicted RBP8.22□□□□□ -1.09
LINC02408-202ENST00000538573 IQGAP2Q13576 1575 aa8.22□□□□□ -1.09
LINC02408-202ENST00000538573 PCDHB8Q9UN66 801 aa8.21□□□□□ -1.1
LINC02408-202ENST00000538573 JPH4Q96JJ6 628 aa8.2□□□□□ -1.1
LINC02408-202ENST00000538573 GOLGA2Q08379 1002 aa8.19□□□□□ -1.1
LINC02408-202ENST00000538573 ZNF467Q7Z7K2 595 aaPredicted RBP8.19□□□□□ -1.1
LINC02408-202ENST00000538573 CIZ1Q9ULV3 898 aaPredicted RBP8.18□□□□□ -1.1
LINC02408-202ENST00000538573 ARHGAP35Q9NRY4 1499 aa8.18□□□□□ -1.1
LINC02408-202ENST00000538573 SPOCK2Q92563 424 aa8.17□□□□□ -1.1
LINC02408-202ENST00000538573 TTBK1Q5TCY1 1321 aaPredicted RBP8.17□□□□□ -1.1
LINC02408-202ENST00000538573 EFCAB5A4FU69 1503 aa8.17□□□□□ -1.1
LINC02408-202ENST00000538573 UGGT2Q9NYU1 1516 aa8.17□□□□□ -1.1
LINC02408-202ENST00000538573 SLAIN1Q8ND83 568 aa8.16□□□□□ -1.1
LINC02408-202ENST00000538573 SAMD9Q5K651 1589 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 CLASP1Q7Z460 1538 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 ARAP1Q96P48 1450 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 FHOD3Q2V2M9 1422 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 CARMIL2Q6F5E8 1435 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 PRG4Q92954 1404 aaPredicted RBP8.15□□□□□ -1.1
LINC02408-202ENST00000538573 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 MKRN3Q13064 507 aaKnown RBP8.14□□□□□ -1.11
LINC02408-202ENST00000538573 DISP1Q96F81 1524 aa8.13□□□□□ -1.11
LINC02408-202ENST00000538573 ST18O60284 1047 aa8.13□□□□□ -1.11
LINC02408-202ENST00000538573 ATP1B4Q9UN42 357 aaPredicted RBP8.13□□□□□ -1.11
LINC02408-202ENST00000538573 KIAA0556O60303 1618 aa8.13□□□□□ -1.11
LINC02408-202ENST00000538573 SHROOM2Q13796 1616 aa8.13□□□□□ -1.11
LINC02408-202ENST00000538573 VPS8Q8N3P4 1428 aa8.12□□□□□ -1.11
LINC02408-202ENST00000538573 CHRM1P11229 460 aaPredicted RBP8.12□□□□□ -1.11
LINC02408-202ENST00000538573 IRX5P78411 483 aaPredicted RBP8.12□□□□□ -1.11
LINC02408-202ENST00000538573 MMRN1Q13201 1228 aa8.12□□□□□ -1.11
LINC02408-202ENST00000538573 IFNLR1Q8IU57 520 aaPredicted RBP8.12□□□□□ -1.11
LINC02408-202ENST00000538573 FMN1Q68DA7 1419 aa8.11□□□□□ -1.11
LINC02408-202ENST00000538573 ERCC6L2Q5T890 1561 aa8.1□□□□□ -1.11
LINC02408-202ENST00000538573 PSEN1P49768 467 aa8.1□□□□□ -1.11
LINC02408-202ENST00000538573 SNPHO15079 494 aa8.09□□□□□ -1.11
LINC02408-202ENST00000538573 SLC24A1O60721 1099 aa8.09□□□□□ -1.11
LINC02408-202ENST00000538573 SPNS2Q8IVW8 549 aa8.09□□□□□ -1.11
LINC02408-202ENST00000538573 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.09□□□□□ -1.11
LINC02408-202ENST00000538573 PTPRGP23470 1445 aa8.09□□□□□ -1.11
LINC02408-202ENST00000538573 PPARGC1BQ86YN6 1023 aaKnown RBP8.08□□□□□ -1.12
LINC02408-202ENST00000538573 TMEM121BQ9BXQ6 578 aaPredicted RBP8.08□□□□□ -1.12
LINC02408-202ENST00000538573 PCF11O94913 1555 aaKnown RBP8.07□□□□□ -1.12
LINC02408-202ENST00000538573 PDAP1Q13442 181 aaKnown RBP8.07□□□□□ -1.12
LINC02408-202ENST00000538573 CASKIN1Q8WXD9 1431 aa8.06□□□□□ -1.12
LINC02408-202ENST00000538573 ARID3CA6NKF2 412 aa8.06□□□□□ -1.12
LINC02408-202ENST00000538573 L3MBTL3Q96JM7 780 aaPredicted RBP8.06□□□□□ -1.12
LINC02408-202ENST00000538573 RAPGEF6Q8TEU7 1601 aa8.06□□□□□ -1.12
LINC02408-202ENST00000538573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC02408-202ENST00000538573 PLB1Q6P1J6 1458 aa8.05□□□□□ -1.12
LINC02408-202ENST00000538573 FYCO1Q9BQS8 1478 aa8.05□□□□□ -1.12
LINC02408-202ENST00000538573 HECW1Q76N89 1606 aa8.03□□□□□ -1.12
LINC02408-202ENST00000538573 G3V3G9 751 aa8.03□□□□□ -1.12
LINC02408-202ENST00000538573 C3orf67Q6ZVT6 689 aa8.03□□□□□ -1.12
LINC02408-202ENST00000538573 LRRIQ1Q96JM4 1722 aa8.03□□□□□ -1.12
LINC02408-202ENST00000538573 ARHGEF11O15085 1522 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms