RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 JPH4Q96JJ6 628 aa10.48□□□□□ -0.73
NECAP1-203ENST00000537796 HECW1Q76N89 1606 aa10.48□□□□□ -0.73
NECAP1-203ENST00000537796 WDR62O43379 1518 aa10.48□□□□□ -0.73
NECAP1-203ENST00000537796 NUP153P49790 1475 aaKnown RBP10.48□□□□□ -0.73
NECAP1-203ENST00000537796 IFT140Q96RY7 1462 aa10.47□□□□□ -0.73
NECAP1-203ENST00000537796 ARHGEF11O15085 1522 aa10.47□□□□□ -0.73
NECAP1-203ENST00000537796 GRIN2AQ12879 1464 aa10.46□□□□□ -0.73
NECAP1-203ENST00000537796 ABCC5O15440 1437 aa10.46□□□□□ -0.74
NECAP1-203ENST00000537796 KIAA0586Q9BVV6 1533 aa10.45□□□□□ -0.74
NECAP1-203ENST00000537796 KDM5BQ9UGL1 1544 aa10.45□□□□□ -0.74
NECAP1-203ENST00000537796 HNRNPUQ00839 825 aaKnown RBP eCLIP10.45□□□□□ -0.74
NECAP1-203ENST00000537796 CDK11AQ9UQ88 783 aaPredicted RBP10.45□□□□□ -0.74
NECAP1-203ENST00000537796 EIF4G3O43432 1585 aaKnown RBP10.45□□□□□ -0.74
NECAP1-203ENST00000537796 DAPK1P53355 1430 aa10.44□□□□□ -0.74
NECAP1-203ENST00000537796 EIF4G2P78344 907 aaKnown RBP eCLIP10.44□□□□□ -0.74
NECAP1-203ENST00000537796 TCOF1Q13428 1488 aaKnown RBP10.43□□□□□ -0.74
NECAP1-203ENST00000537796 KIAA0556O60303 1618 aa10.43□□□□□ -0.74
NECAP1-203ENST00000537796 HNRNPMP52272 730 aaKnown RBP eCLIP10.42□□□□□ -0.74
NECAP1-203ENST00000537796 FAM9BQ8IZU0 186 aa10.42□□□□□ -0.74
NECAP1-203ENST00000537796 KDM2AQ9Y2K7 1162 aa10.42□□□□□ -0.74
NECAP1-203ENST00000537796 PKD2Q13563 968 aa10.41□□□□□ -0.74
NECAP1-203ENST00000537796 MIA2Q96PC5 1412 aa10.41□□□□□ -0.74
NECAP1-203ENST00000537796 CEP170Q5SW79 1584 aa10.4□□□□□ -0.74
NECAP1-203ENST00000537796 TSHZ2Q9NRE2 1034 aa10.4□□□□□ -0.74
NECAP1-203ENST00000537796 PLEKHD1A6NEE1 506 aa10.4□□□□□ -0.75
NECAP1-203ENST00000537796 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
NECAP1-203ENST00000537796 CCER2I3L3R5 266 aa10.39□□□□□ -0.75
NECAP1-203ENST00000537796 KIF14Q15058 1648 aa10.39□□□□□ -0.75
NECAP1-203ENST00000537796 RAPGEF6Q8TEU7 1601 aa10.39□□□□□ -0.75
NECAP1-203ENST00000537796 TROQ12816 1431 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-203ENST00000537796 CAMSAP2Q08AD1 1489 aa10.37□□□□□ -0.75
NECAP1-203ENST00000537796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.37□□□□□ -0.75
NECAP1-203ENST00000537796 GPATCH8Q9UKJ3 1502 aaKnown RBP10.37□□□□□ -0.75
NECAP1-203ENST00000537796 NEFLP07196 543 aa10.36□□□□□ -0.75
NECAP1-203ENST00000537796 GCC2Q8IWJ2 1684 aa10.36□□□□□ -0.75
NECAP1-203ENST00000537796 SYNJ2O15056 1496 aa10.36□□□□□ -0.75
NECAP1-203ENST00000537796 MRS2Q9HD23 443 aa10.35□□□□□ -0.75
NECAP1-203ENST00000537796 KIF7Q2M1P5 1343 aa10.35□□□□□ -0.75
NECAP1-203ENST00000537796 NCOA1Q15788 1441 aa10.35□□□□□ -0.75
NECAP1-203ENST00000537796 AKNAQ7Z591 1439 aa10.35□□□□□ -0.75
NECAP1-203ENST00000537796 NUP155O75694 1391 aa10.34□□□□□ -0.75
NECAP1-203ENST00000537796 RGL3Q3MIN7 710 aa10.34□□□□□ -0.75
NECAP1-203ENST00000537796 CCDC7Q96M83 1385 aa10.34□□□□□ -0.75
NECAP1-203ENST00000537796 CARMIL2Q6F5E8 1435 aa10.33□□□□□ -0.76
NECAP1-203ENST00000537796 PRKRIP1Q9H875 184 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-203ENST00000537796 PZPP20742 1482 aa10.33□□□□□ -0.76
NECAP1-203ENST00000537796 DNMT1P26358 1616 aaKnown RBP10.33□□□□□ -0.76
NECAP1-203ENST00000537796 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-203ENST00000537796 TSPY4P0CV99 314 aa10.32□□□□□ -0.76
NECAP1-203ENST00000537796 TSPY10P0CW01 314 aa10.32□□□□□ -0.76
NECAP1-203ENST00000537796 ROCK1Q13464 1354 aa10.32□□□□□ -0.76
NECAP1-203ENST00000537796 ATP10BO94823 1461 aa10.32□□□□□ -0.76
NECAP1-203ENST00000537796 RPRD2Q5VT52 1461 aaKnown RBP10.32□□□□□ -0.76
NECAP1-203ENST00000537796 DCAF11Q8TEB1 546 aa10.31□□□□□ -0.76
NECAP1-203ENST00000537796 TEX14Q8IWB6 1497 aa10.31□□□□□ -0.76
NECAP1-203ENST00000537796 ANKRD50Q9ULJ7 1429 aa10.31□□□□□ -0.76
NECAP1-203ENST00000537796 ANKRD30AQ9BXX3 1397 aa10.3□□□□□ -0.76
NECAP1-203ENST00000537796 PTPRGP23470 1445 aa10.3□□□□□ -0.76
NECAP1-203ENST00000537796 CNTLNQ9NXG0 1405 aa10.29□□□□□ -0.76
NECAP1-203ENST00000537796 NUP160Q12769 1436 aa10.29□□□□□ -0.76
NECAP1-203ENST00000537796 CARD11Q9BXL7 1154 aa10.28□□□□□ -0.76
NECAP1-203ENST00000537796 SALL2Q9Y467 1007 aaPredicted RBP10.27□□□□□ -0.76
NECAP1-203ENST00000537796 USP47Q96K76 1375 aa10.27□□□□□ -0.76
NECAP1-203ENST00000537796 C9orf84Q5VXU9 1444 aa10.27□□□□□ -0.77
NECAP1-203ENST00000537796 ST20-MTHFSA0A0A6YYL1 179 aa10.27□□□□□ -0.77
NECAP1-203ENST00000537796 KIAA1107Q9UPP5 1409 aa10.27□□□□□ -0.77
NECAP1-203ENST00000537796 KIF15Q9NS87 1388 aa10.26□□□□□ -0.77
NECAP1-203ENST00000537796 NBPF1Q3BBV0 1214 aa10.25□□□□□ -0.77
NECAP1-203ENST00000537796 SPATA31E1Q6ZUB1 1445 aa10.25□□□□□ -0.77
NECAP1-203ENST00000537796 ERCC6L2Q5T890 1561 aa10.24□□□□□ -0.77
NECAP1-203ENST00000537796 B4GALNT3Q6L9W6 998 aa10.23□□□□□ -0.77
NECAP1-203ENST00000537796 ABCC10Q5T3U5 1492 aa10.23□□□□□ -0.77
NECAP1-203ENST00000537796 CDC42BPAQ5VT25 1732 aa10.22□□□□□ -0.77
NECAP1-203ENST00000537796 ABCA8O94911 1581 aa10.22□□□□□ -0.77
NECAP1-203ENST00000537796 RBM19Q9Y4C8 960 aaKnown RBP10.21□□□□□ -0.77
NECAP1-203ENST00000537796 BCORL1Q5H9F3 1711 aa10.21□□□□□ -0.78
NECAP1-203ENST00000537796 MYT1LQ9UL68 1186 aa10.2□□□□□ -0.78
NECAP1-203ENST00000537796 ITSN2Q9NZM3 1697 aa10.2□□□□□ -0.78
NECAP1-203ENST00000537796 DHX29Q7Z478 1369 aaKnown RBP10.19□□□□□ -0.78
NECAP1-203ENST00000537796 ADGRL2O95490 1459 aa10.18□□□□□ -0.78
NECAP1-203ENST00000537796 MBD5Q9P267 1494 aa10.18□□□□□ -0.78
NECAP1-203ENST00000537796 AFAP1Q8N556 730 aa10.18□□□□□ -0.78
NECAP1-203ENST00000537796 TMC1Q8TDI8 760 aa10.18□□□□□ -0.78
NECAP1-203ENST00000537796 ROCK2O75116 1388 aaKnown RBP10.18□□□□□ -0.78
NECAP1-203ENST00000537796 CC2D1BQ5T0F9 858 aaKnown RBP10.17□□□□□ -0.78
NECAP1-203ENST00000537796 ARHGAP5Q13017 1502 aa10.17□□□□□ -0.78
NECAP1-203ENST00000537796 SYCP2Q9BX26 1530 aa10.17□□□□□ -0.78
NECAP1-203ENST00000537796 ADGBQ8N7X0 1667 aa10.17□□□□□ -0.78
NECAP1-203ENST00000537796 SENP3Q9H4L4 574 aaPredicted RBP10.17□□□□□ -0.78
NECAP1-203ENST00000537796 PLEKHH2Q8IVE3 1493 aa10.16□□□□□ -0.78
NECAP1-203ENST00000537796 SAMD9LQ8IVG5 1584 aa10.16□□□□□ -0.78
NECAP1-203ENST00000537796 CROCC2H7BZ55 1655 aa10.16□□□□□ -0.78
NECAP1-203ENST00000537796 ADCY10Q96PN6 1610 aa10.16□□□□□ -0.78
NECAP1-203ENST00000537796 CHD1O14646 1710 aa10.15□□□□□ -0.78
NECAP1-203ENST00000537796 TTC37Q6PGP7 1564 aa10.14□□□□□ -0.79
NECAP1-203ENST00000537796 ZBED9Q6R2W3 1325 aa10.14□□□□□ -0.79
NECAP1-203ENST00000537796 CCDC141Q6ZP82 1450 aa10.14□□□□□ -0.79
NECAP1-203ENST00000537796 CDC42BPBQ9Y5S2 1711 aa10.13□□□□□ -0.79
NECAP1-203ENST00000537796 CCDC144AA2RUR9 1427 aa10.13□□□□□ -0.79
NECAP1-203ENST00000537796 PNISRQ8TF01 805 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms