RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 NISCHQ9Y2I1 1504 aa15.42■□□□□ 0.06
NECAP1-203ENST00000537796 SHROOM4Q9ULL8 1493 aa13.54□□□□□ -0.24
NECAP1-203ENST00000537796 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
NECAP1-203ENST00000537796 SUPT5HO00267 1087 aaKnown RBP13.24□□□□□ -0.29
NECAP1-203ENST00000537796 ZCCHC6Q5VYS8 1495 aaKnown RBP13□□□□□ -0.33
NECAP1-203ENST00000537796 CCDC180Q9P1Z9 1646 aa12.93□□□□□ -0.34
NECAP1-203ENST00000537796 CHIC1Q5VXU3 224 aa12.67□□□□□ -0.38
NECAP1-203ENST00000537796 MYO15BQ96JP2 1530 aa12.63□□□□□ -0.39
NECAP1-203ENST00000537796 LOC105371045A0A1W2PR82 267 aa12.47□□□□□ -0.41
NECAP1-203ENST00000537796 ABCC9O60706 1549 aa12.46□□□□□ -0.41
NECAP1-203ENST00000537796 SCRIBQ14160 1630 aa12.45□□□□□ -0.42
NECAP1-203ENST00000537796 DCAF1Q9Y4B6 1507 aa12.44□□□□□ -0.42
NECAP1-203ENST00000537796 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
NECAP1-203ENST00000537796 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
NECAP1-203ENST00000537796 FAM9AQ8IZU1 332 aaPredicted RBP12.31□□□□□ -0.44
NECAP1-203ENST00000537796 RSF1Q96T23 1441 aaPredicted RBP12.27□□□□□ -0.44
NECAP1-203ENST00000537796 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.45
NECAP1-203ENST00000537796 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
NECAP1-203ENST00000537796 PPARGC1BQ86YN6 1023 aaKnown RBP12.17□□□□□ -0.46
NECAP1-203ENST00000537796 RB1CC1Q8TDY2 1594 aa12.16□□□□□ -0.46
NECAP1-203ENST00000537796 HRCP23327 699 aa12.14□□□□□ -0.47
NECAP1-203ENST00000537796 MROH2BQ7Z745 1585 aa12.1□□□□□ -0.47
NECAP1-203ENST00000537796 NACADO15069 1562 aa12.05□□□□□ -0.48
NECAP1-203ENST00000537796 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
NECAP1-203ENST00000537796 WIZO95785 1651 aa12.02□□□□□ -0.48
NECAP1-203ENST00000537796 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
NECAP1-203ENST00000537796 TTBK1Q5TCY1 1321 aaPredicted RBP11.92□□□□□ -0.5
NECAP1-203ENST00000537796 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
NECAP1-203ENST00000537796 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
NECAP1-203ENST00000537796 CCDC88BA6NC98 1476 aa11.78□□□□□ -0.52
NECAP1-203ENST00000537796 UNC13AQ9UPW8 1703 aa11.77□□□□□ -0.53
NECAP1-203ENST00000537796 SMARCA4P51532 1647 aa11.74□□□□□ -0.53
NECAP1-203ENST00000537796 SOGA1O94964 1423 aa11.71□□□□□ -0.53
NECAP1-203ENST00000537796 RANGAP1P46060 587 aaPredicted RBP11.7□□□□□ -0.54
NECAP1-203ENST00000537796 TOP2AP11388 1531 aaKnown RBP11.7□□□□□ -0.54
NECAP1-203ENST00000537796 RUSC2Q8N2Y8 1516 aa11.69□□□□□ -0.54
NECAP1-203ENST00000537796 SMARCA2P51531 1590 aa11.68□□□□□ -0.54
NECAP1-203ENST00000537796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.68□□□□□ -0.54
NECAP1-203ENST00000537796 UBTFP17480 764 aaKnown RBP11.68□□□□□ -0.54
NECAP1-203ENST00000537796 BICRAQ9NZM4 1560 aa11.67□□□□□ -0.54
NECAP1-203ENST00000537796 EIF4G1Q04637 1599 aaKnown RBP11.66□□□□□ -0.54
NECAP1-203ENST00000537796 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
NECAP1-203ENST00000537796 CCER1Q8TC90 406 aaPredicted RBP11.57□□□□□ -0.56
NECAP1-203ENST00000537796 CEP162Q5TB80 1403 aa11.55□□□□□ -0.56
NECAP1-203ENST00000537796 WRNQ14191 1432 aaPredicted RBP eCLIP11.53□□□□□ -0.56
NECAP1-203ENST00000537796 ATAD2BQ9ULI0 1458 aa11.51□□□□□ -0.57
NECAP1-203ENST00000537796 ZEB1P37275 1124 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-203ENST00000537796 BAZ1BQ9UIG0 1483 aaKnown RBP11.5□□□□□ -0.57
NECAP1-203ENST00000537796 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
NECAP1-203ENST00000537796 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.58
NECAP1-203ENST00000537796 TNIKQ9UKE5 1360 aa11.46□□□□□ -0.58
NECAP1-203ENST00000537796 GOLGA3Q08378 1498 aa11.4□□□□□ -0.58
NECAP1-203ENST00000537796 RAPGEF2Q9Y4G8 1499 aa11.38□□□□□ -0.59
NECAP1-203ENST00000537796 PEG3Q9GZU2 1588 aa11.38□□□□□ -0.59
NECAP1-203ENST00000537796 CLIP1P30622 1438 aa11.35□□□□□ -0.59
NECAP1-203ENST00000537796 EEA1Q15075 1411 aa11.35□□□□□ -0.59
NECAP1-203ENST00000537796 APLP2Q06481 763 aa11.32□□□□□ -0.6
NECAP1-203ENST00000537796 CEP164Q9UPV0 1460 aa11.32□□□□□ -0.6
NECAP1-203ENST00000537796 KANK4Q5T7N3 995 aaPredicted RBP11.26□□□□□ -0.61
NECAP1-203ENST00000537796 DIEXFQ68CQ4 756 aaKnown RBP11.26□□□□□ -0.61
NECAP1-203ENST00000537796 SCAF1Q9H7N4 1312 aaKnown RBP11.25□□□□□ -0.61
NECAP1-203ENST00000537796 ITGAEP38570 1179 aa11.25□□□□□ -0.61
NECAP1-203ENST00000537796 CUX1P39880 1505 aa11.23□□□□□ -0.61
NECAP1-203ENST00000537796 VPS8Q8N3P4 1428 aa11.22□□□□□ -0.61
NECAP1-203ENST00000537796 NCAPD3P42695 1498 aa11.22□□□□□ -0.61
NECAP1-203ENST00000537796 TOP2BQ02880 1626 aa11.22□□□□□ -0.61
NECAP1-203ENST00000537796 P3H3Q8IVL6 736 aa11.22□□□□□ -0.61
NECAP1-203ENST00000537796 KIF21BO75037 1637 aa11.22□□□□□ -0.61
NECAP1-203ENST00000537796 YTHDC1Q96MU7 727 aaKnown RBP11.19□□□□□ -0.62
NECAP1-203ENST00000537796 ATP1B4Q9UN42 357 aaPredicted RBP11.19□□□□□ -0.62
NECAP1-203ENST00000537796 NEUROD1Q13562 356 aa11.18□□□□□ -0.62
NECAP1-203ENST00000537796 DNAJC5BQ9UF47 199 aa11.17□□□□□ -0.62
NECAP1-203ENST00000537796 CFTRP13569 1480 aa11.15□□□□□ -0.62
NECAP1-203ENST00000537796 ARAP1Q96P48 1450 aa11.15□□□□□ -0.62
NECAP1-203ENST00000537796 KIF27Q86VH2 1401 aa11.15□□□□□ -0.62
NECAP1-203ENST00000537796 PRXQ9BXM0 1461 aa11.14□□□□□ -0.63
NECAP1-203ENST00000537796 HMGXB3Q12766 1538 aa11.14□□□□□ -0.63
NECAP1-203ENST00000537796 CUX2O14529 1486 aa11.14□□□□□ -0.63
NECAP1-203ENST00000537796 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
NECAP1-203ENST00000537796 BIVM-ERCC5R4GMW8 1640 aa11.13□□□□□ -0.63
NECAP1-203ENST00000537796 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
NECAP1-203ENST00000537796 IGF1RP08069 1367 aa11.09□□□□□ -0.63
NECAP1-203ENST00000537796 NESP48681 1621 aa11.09□□□□□ -0.63
NECAP1-203ENST00000537796 MIER1Q8N108 512 aa11.09□□□□□ -0.63
NECAP1-203ENST00000537796 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.64
NECAP1-203ENST00000537796 CC2D2AQ9P2K1 1620 aa11.06□□□□□ -0.64
NECAP1-203ENST00000537796 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
NECAP1-203ENST00000537796 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
NECAP1-203ENST00000537796 RAD54L2Q9Y4B4 1467 aa11.06□□□□□ -0.64
NECAP1-203ENST00000537796 CARMIL1Q5VZK9 1371 aa11.05□□□□□ -0.64
NECAP1-203ENST00000537796 GTF3C3Q9Y5Q9 886 aa11.05□□□□□ -0.64
NECAP1-203ENST00000537796 ERICH3Q5RHP9 1530 aa11.04□□□□□ -0.64
NECAP1-203ENST00000537796 FAM50AQ14320 339 aaKnown RBP11.03□□□□□ -0.64
NECAP1-203ENST00000537796 FANCD2Q9BXW9 1451 aa11.01□□□□□ -0.65
NECAP1-203ENST00000537796 DHX57Q6P158 1386 aaKnown RBP11□□□□□ -0.65
NECAP1-203ENST00000537796 TDRD9Q8NDG6 1382 aaKnown RBP10.97□□□□□ -0.65
NECAP1-203ENST00000537796 ARID3CA6NKF2 412 aa10.97□□□□□ -0.65
NECAP1-203ENST00000537796 CCNB3Q8WWL7 1395 aa10.97□□□□□ -0.65
NECAP1-203ENST00000537796 FHOD3Q2V2M9 1422 aa10.97□□□□□ -0.65
NECAP1-203ENST00000537796 CENPBP07199 599 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms