RNA–Protein interactions for RNA: ENST00000533604.1

CAPN11-205, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,051 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-205ENST00000533604 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
CAPN11-205ENST00000533604 CD109Q6YHK3 1445 aa12.62□□□□□ -0.39
CAPN11-205ENST00000533604 TROQ12816 1431 aaPredicted RBP12.61□□□□□ -0.39
CAPN11-205ENST00000533604 CFAP43Q8NDM7 1665 aa12.61□□□□□ -0.39
CAPN11-205ENST00000533604 EHBP1L1Q8N3D4 1523 aa12.59□□□□□ -0.39
CAPN11-205ENST00000533604 KDM5BQ9UGL1 1544 aa12.59□□□□□ -0.39
CAPN11-205ENST00000533604 RAPGEF3O95398 923 aa12.59□□□□□ -0.39
CAPN11-205ENST00000533604 MED1Q15648 1581 aaPredicted RBP12.59□□□□□ -0.39
CAPN11-205ENST00000533604 STRCQ7RTU9 1775 aa12.58□□□□□ -0.39
CAPN11-205ENST00000533604 MAGI3Q5TCQ9 1506 aa12.58□□□□□ -0.4
CAPN11-205ENST00000533604 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
CAPN11-205ENST00000533604 YEATS2Q9ULM3 1422 aa12.57□□□□□ -0.4
CAPN11-205ENST00000533604 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
CAPN11-205ENST00000533604 NCOA2Q15596 1464 aa12.57□□□□□ -0.4
CAPN11-205ENST00000533604 LRRIQ1Q96JM4 1722 aa12.57□□□□□ -0.4
CAPN11-205ENST00000533604 ZCCHC11Q5TAX3 1644 aaKnown RBP12.56□□□□□ -0.4
CAPN11-205ENST00000533604 UBAP1LF5GYI3 381 aa12.56□□□□□ -0.4
CAPN11-205ENST00000533604 FAM50AQ14320 339 aaKnown RBP12.56□□□□□ -0.4
CAPN11-205ENST00000533604 PHLDB1Q86UU1 1377 aa12.56□□□□□ -0.4
CAPN11-205ENST00000533604 LTBP4Q8N2S1 1624 aa12.55□□□□□ -0.4
CAPN11-205ENST00000533604 CFDP1Q9UEE9 299 aaPredicted RBP12.54□□□□□ -0.4
CAPN11-205ENST00000533604 SUPT6HQ7KZ85 1726 aaKnown RBP12.54□□□□□ -0.4
CAPN11-205ENST00000533604 WDR7Q9Y4E6 1490 aa12.53□□□□□ -0.4
CAPN11-205ENST00000533604 HSPA1LP34931 641 aa12.52□□□□□ -0.41
CAPN11-205ENST00000533604 MYOM3Q5VTT5 1437 aa12.52□□□□□ -0.41
CAPN11-205ENST00000533604 ARAP3Q8WWN8 1544 aa12.52□□□□□ -0.41
CAPN11-205ENST00000533604 ITGAEP38570 1179 aa12.51□□□□□ -0.41
CAPN11-205ENST00000533604 ZNF777Q9ULD5 760 aaPredicted RBP12.51□□□□□ -0.41
CAPN11-205ENST00000533604 RRBP1Q9P2E9 1410 aaKnown RBP12.51□□□□□ -0.41
CAPN11-205ENST00000533604 FGD6Q6ZV73 1430 aa12.49□□□□□ -0.41
CAPN11-205ENST00000533604 MIA2Q96PC5 1412 aa12.49□□□□□ -0.41
CAPN11-205ENST00000533604 MLECQ14165 292 aa12.49□□□□□ -0.41
CAPN11-205ENST00000533604 KIF14Q15058 1648 aa12.48□□□□□ -0.41
CAPN11-205ENST00000533604 CEBPAP49715 358 aaPredicted RBP12.48□□□□□ -0.41
CAPN11-205ENST00000533604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.47□□□□□ -0.41
CAPN11-205ENST00000533604 EFCAB2Q5VUJ9 269 aa12.47□□□□□ -0.41
CAPN11-205ENST00000533604 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
CAPN11-205ENST00000533604 IQSEC2Q5JU85 1478 aa12.46□□□□□ -0.41
CAPN11-205ENST00000533604 PTPRTO14522 1441 aa12.45□□□□□ -0.42
CAPN11-205ENST00000533604 SRCAPQ6ZRS2 3230 aa12.45□□□□□ -0.42
CAPN11-205ENST00000533604 ZNF644Q9H582 1327 aaPredicted RBP12.43□□□□□ -0.42
CAPN11-205ENST00000533604 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
CAPN11-205ENST00000533604 PLCH2O75038 1416 aa12.43□□□□□ -0.42
CAPN11-205ENST00000533604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.42□□□□□ -0.42
CAPN11-205ENST00000533604 PIP4K2BP78356 416 aa12.42□□□□□ -0.42
CAPN11-205ENST00000533604 RSPH4AQ5TD94 716 aa12.42□□□□□ -0.42
CAPN11-205ENST00000533604 RGS17Q9UGC6 210 aaPredicted RBP12.41□□□□□ -0.42
CAPN11-205ENST00000533604 PREX1Q8TCU6 1659 aa12.41□□□□□ -0.42
CAPN11-205ENST00000533604 SIGLEC1Q9BZZ2 1709 aa12.4□□□□□ -0.42
CAPN11-205ENST00000533604 TSPY4P0CV99 314 aa12.4□□□□□ -0.42
CAPN11-205ENST00000533604 TSPY10P0CW01 314 aa12.4□□□□□ -0.42
CAPN11-205ENST00000533604 HNRNPMP52272 730 aaKnown RBP eCLIP12.4□□□□□ -0.42
CAPN11-205ENST00000533604 PTPN23Q9H3S7 1636 aa12.4□□□□□ -0.42
CAPN11-205ENST00000533604 TCOF1Q13428 1488 aaKnown RBP12.4□□□□□ -0.43
CAPN11-205ENST00000533604 FRMPD1Q5SYB0 1578 aa12.39□□□□□ -0.43
CAPN11-205ENST00000533604 ARHGAP5Q13017 1502 aa12.39□□□□□ -0.43
CAPN11-205ENST00000533604 ZNF335Q9H4Z2 1342 aaPredicted RBP12.38□□□□□ -0.43
CAPN11-205ENST00000533604 CHIC2Q9UKJ5 165 aa12.38□□□□□ -0.43
CAPN11-205ENST00000533604 ITSN2Q9NZM3 1697 aa12.37□□□□□ -0.43
CAPN11-205ENST00000533604 TTC37Q6PGP7 1564 aa12.36□□□□□ -0.43
CAPN11-205ENST00000533604 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
CAPN11-205ENST00000533604 SENP3Q9H4L4 574 aaPredicted RBP12.36□□□□□ -0.43
CAPN11-205ENST00000533604 CAMSAP2Q08AD1 1489 aa12.35□□□□□ -0.43
CAPN11-205ENST00000533604 FER1L4A9Z1Z3 1794 aa12.35□□□□□ -0.43
CAPN11-205ENST00000533604 ABCA9Q8IUA7 1624 aa12.34□□□□□ -0.43
CAPN11-205ENST00000533604 ABCC5O15440 1437 aa12.34□□□□□ -0.43
CAPN11-205ENST00000533604 POGZQ7Z3K3 1410 aa12.34□□□□□ -0.43
CAPN11-205ENST00000533604 KIAA1107Q9UPP5 1409 aa12.34□□□□□ -0.43
CAPN11-205ENST00000533604 RRP7BPQ9NSQ0 103 aa12.33□□□□□ -0.44
CAPN11-205ENST00000533604 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
CAPN11-205ENST00000533604 DAPK1P53355 1430 aa12.33□□□□□ -0.44
CAPN11-205ENST00000533604 UHRF1BP1Q6BDS2 1440 aa12.33□□□□□ -0.44
CAPN11-205ENST00000533604 CDC42BPAQ5VT25 1732 aa12.33□□□□□ -0.44
CAPN11-205ENST00000533604 FANCAO15360 1455 aa12.33□□□□□ -0.44
CAPN11-205ENST00000533604 ARHGEF40Q8TER5 1519 aa12.32□□□□□ -0.44
CAPN11-205ENST00000533604 PREX2Q70Z35 1606 aa12.32□□□□□ -0.44
CAPN11-205ENST00000533604 MYO5CQ9NQX4 1742 aa12.31□□□□□ -0.44
CAPN11-205ENST00000533604 PTPRKQ15262 1439 aa12.31□□□□□ -0.44
CAPN11-205ENST00000533604 AKNAQ7Z591 1439 aa12.31□□□□□ -0.44
CAPN11-205ENST00000533604 SETD5Q9C0A6 1442 aa12.31□□□□□ -0.44
CAPN11-205ENST00000533604 HRCP23327 699 aa12.3□□□□□ -0.44
CAPN11-205ENST00000533604 POTEAQ6S8J7 498 aa12.3□□□□□ -0.44
CAPN11-205ENST00000533604 ANKRD30AQ9BXX3 1397 aa12.3□□□□□ -0.44
CAPN11-205ENST00000533604 SCAPERQ9BY12 1400 aa12.29□□□□□ -0.44
CAPN11-205ENST00000533604 CDC42BPBQ9Y5S2 1711 aa12.29□□□□□ -0.44
CAPN11-205ENST00000533604 AFAP1Q8N556 730 aa12.29□□□□□ -0.44
CAPN11-205ENST00000533604 NCKAP5LQ9HCH0 1330 aa12.29□□□□□ -0.44
CAPN11-205ENST00000533604 ROCK1Q13464 1354 aa12.29□□□□□ -0.44
CAPN11-205ENST00000533604 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
CAPN11-205ENST00000533604 MBD5Q9P267 1494 aa12.28□□□□□ -0.44
CAPN11-205ENST00000533604 SAMD9LQ8IVG5 1584 aa12.28□□□□□ -0.44
CAPN11-205ENST00000533604 CCER1Q8TC90 406 aaPredicted RBP12.28□□□□□ -0.44
CAPN11-205ENST00000533604 SPAG9O60271 1321 aaKnown RBP12.28□□□□□ -0.44
CAPN11-205ENST00000533604 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
CAPN11-205ENST00000533604 CCDC141Q6ZP82 1450 aa12.27□□□□□ -0.44
CAPN11-205ENST00000533604 NEO1Q92859 1461 aa12.27□□□□□ -0.45
CAPN11-205ENST00000533604 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
CAPN11-205ENST00000533604 RAB3GAP2Q9H2M9 1393 aa12.26□□□□□ -0.45
CAPN11-205ENST00000533604 C9orf84Q5VXU9 1444 aa12.26□□□□□ -0.45
CAPN11-205ENST00000533604 ARHGEF5Q12774 1597 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms