RNA–Protein interactions for RNA: ENST00000533604.1

CAPN11-205, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,051 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-205ENST00000533604 NISCHQ9Y2I1 1504 aa18.95■□□□□ 0.62
CAPN11-205ENST00000533604 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
CAPN11-205ENST00000533604 ABCC9O60706 1549 aa17.57■□□□□ 0.4
CAPN11-205ENST00000533604 DNAJC5Q9H3Z4 198 aa16.81■□□□□ 0.28
CAPN11-205ENST00000533604 CCDC180Q9P1Z9 1646 aa16.54■□□□□ 0.24
CAPN11-205ENST00000533604 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
CAPN11-205ENST00000533604 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
CAPN11-205ENST00000533604 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
CAPN11-205ENST00000533604 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
CAPN11-205ENST00000533604 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
CAPN11-205ENST00000533604 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
CAPN11-205ENST00000533604 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
CAPN11-205ENST00000533604 CC2D2AQ9P2K1 1620 aa15.74■□□□□ 0.11
CAPN11-205ENST00000533604 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
CAPN11-205ENST00000533604 NACADO15069 1562 aa15.69■□□□□ 0.1
CAPN11-205ENST00000533604 DCAF1Q9Y4B6 1507 aa15.66■□□□□ 0.1
CAPN11-205ENST00000533604 MYO15BQ96JP2 1530 aa15.56■□□□□ 0.08
CAPN11-205ENST00000533604 CUX2O14529 1486 aa15.41■□□□□ 0.06
CAPN11-205ENST00000533604 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
CAPN11-205ENST00000533604 SHROOM4Q9ULL8 1493 aa15.38■□□□□ 0.05
CAPN11-205ENST00000533604 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
CAPN11-205ENST00000533604 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
CAPN11-205ENST00000533604 AEBP2Q6ZN18 517 aaPredicted RBP14.99□□□□□ -0.01
CAPN11-205ENST00000533604 NESP48681 1621 aa14.81□□□□□ -0.04
CAPN11-205ENST00000533604 SUPT5HO00267 1087 aaKnown RBP14.77□□□□□ -0.05
CAPN11-205ENST00000533604 THOC2Q8NI27 1593 aaKnown RBP14.73□□□□□ -0.05
CAPN11-205ENST00000533604 CHIC1Q5VXU3 224 aa14.73□□□□□ -0.05
CAPN11-205ENST00000533604 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
CAPN11-205ENST00000533604 TRHP20396 242 aaPredicted RBP14.66□□□□□ -0.06
CAPN11-205ENST00000533604 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
CAPN11-205ENST00000533604 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
CAPN11-205ENST00000533604 ILDR1Q86SU0 546 aaPredicted RBP14.64□□□□□ -0.07
CAPN11-205ENST00000533604 MROH2BQ7Z745 1585 aa14.61□□□□□ -0.07
CAPN11-205ENST00000533604 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
CAPN11-205ENST00000533604 RIMBP3CA6NJZ7 1639 aa14.56□□□□□ -0.08
CAPN11-205ENST00000533604 RIMBP3BA6NNM3 1639 aa14.56□□□□□ -0.08
CAPN11-205ENST00000533604 SMARCA4P51532 1647 aa14.56□□□□□ -0.08
CAPN11-205ENST00000533604 RIMBP3Q9UFD9 1639 aa14.56□□□□□ -0.08
CAPN11-205ENST00000533604 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
CAPN11-205ENST00000533604 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
CAPN11-205ENST00000533604 CYB5RLQ6IPT4 315 aa14.49□□□□□ -0.09
CAPN11-205ENST00000533604 WIZO95785 1651 aa14.45□□□□□ -0.1
CAPN11-205ENST00000533604 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
CAPN11-205ENST00000533604 ARHGEF11O15085 1522 aa14.39□□□□□ -0.11
CAPN11-205ENST00000533604 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
CAPN11-205ENST00000533604 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
CAPN11-205ENST00000533604 LAMC3Q9Y6N6 1575 aa14.34□□□□□ -0.11
CAPN11-205ENST00000533604 PDS5BQ9NTI5 1447 aa14.33□□□□□ -0.11
CAPN11-205ENST00000533604 TOP2AP11388 1531 aaKnown RBP14.33□□□□□ -0.12
CAPN11-205ENST00000533604 MRC2Q9UBG0 1479 aa14.29□□□□□ -0.12
CAPN11-205ENST00000533604 HMGXB3Q12766 1538 aa14.27□□□□□ -0.12
CAPN11-205ENST00000533604 WDR62O43379 1518 aa14.26□□□□□ -0.13
CAPN11-205ENST00000533604 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
CAPN11-205ENST00000533604 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
CAPN11-205ENST00000533604 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
CAPN11-205ENST00000533604 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
CAPN11-205ENST00000533604 CFTRP13569 1480 aa13.98□□□□□ -0.17
CAPN11-205ENST00000533604 ZNF608Q9ULD9 1512 aaPredicted RBP13.97□□□□□ -0.17
CAPN11-205ENST00000533604 KDM4FA0A1W2PPD8 638 aa13.95□□□□□ -0.18
CAPN11-205ENST00000533604 FANCD2Q9BXW9 1451 aa13.94□□□□□ -0.18
CAPN11-205ENST00000533604 URB2Q14146 1524 aaKnown RBP13.93□□□□□ -0.18
CAPN11-205ENST00000533604 FBLN2P98095 1184 aa13.89□□□□□ -0.19
CAPN11-205ENST00000533604 CHD1O14646 1710 aa13.87□□□□□ -0.19
CAPN11-205ENST00000533604 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.2
CAPN11-205ENST00000533604 ABCC8Q09428 1581 aa13.79□□□□□ -0.2
CAPN11-205ENST00000533604 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
CAPN11-205ENST00000533604 FBXO41Q8TF61 875 aa13.75□□□□□ -0.21
CAPN11-205ENST00000533604 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
CAPN11-205ENST00000533604 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
CAPN11-205ENST00000533604 AQRO60306 1485 aaKnown RBP eCLIP13.73□□□□□ -0.21
CAPN11-205ENST00000533604 LMTK3Q96Q04 1460 aa13.73□□□□□ -0.21
CAPN11-205ENST00000533604 ILDR2Q71H61 639 aa13.7□□□□□ -0.22
CAPN11-205ENST00000533604 SOCS7O14512 581 aa13.68□□□□□ -0.22
CAPN11-205ENST00000533604 CUX1P39880 1505 aa13.67□□□□□ -0.22
CAPN11-205ENST00000533604 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
CAPN11-205ENST00000533604 FAM9AQ8IZU1 332 aaPredicted RBP13.65□□□□□ -0.22
CAPN11-205ENST00000533604 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
CAPN11-205ENST00000533604 TOP2BQ02880 1626 aa13.64□□□□□ -0.23
CAPN11-205ENST00000533604 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
CAPN11-205ENST00000533604 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
CAPN11-205ENST00000533604 ERCC6L2Q5T890 1561 aa13.62□□□□□ -0.23
CAPN11-205ENST00000533604 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
CAPN11-205ENST00000533604 HECW2Q9P2P5 1572 aa13.62□□□□□ -0.23
CAPN11-205ENST00000533604 KIF13AQ9H1H9 1805 aa13.61□□□□□ -0.23
CAPN11-205ENST00000533604 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
CAPN11-205ENST00000533604 SOGA1O94964 1423 aa13.59□□□□□ -0.23
CAPN11-205ENST00000533604 FGD5Q6ZNL6 1462 aa13.59□□□□□ -0.23
CAPN11-205ENST00000533604 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
CAPN11-205ENST00000533604 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
CAPN11-205ENST00000533604 CHMP7Q8WUX9 453 aaPredicted RBP13.54□□□□□ -0.24
CAPN11-205ENST00000533604 EEA1Q15075 1411 aa13.54□□□□□ -0.24
CAPN11-205ENST00000533604 KIF27Q86VH2 1401 aa13.52□□□□□ -0.25
CAPN11-205ENST00000533604 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.25
CAPN11-205ENST00000533604 TARBP1Q13395 1621 aaKnown RBP13.5□□□□□ -0.25
CAPN11-205ENST00000533604 FAM69CQ0P6D2 419 aa13.5□□□□□ -0.25
CAPN11-205ENST00000533604 SYNJ2O15056 1496 aa13.49□□□□□ -0.25
CAPN11-205ENST00000533604 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
CAPN11-205ENST00000533604 TDRD9Q8NDG6 1382 aaKnown RBP13.48□□□□□ -0.25
CAPN11-205ENST00000533604 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
CAPN11-205ENST00000533604 LOC105371045A0A1W2PR82 267 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms