RNA–Protein interactions for RNA: ENST00000532048.5

CELF1-215, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 1 (best) BASIC

Gene CELF1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-215ENST00000532048 KIAA0556O60303 1618 aa11.84□□□□□ -0.51
CELF1-215ENST00000532048 NUP153P49790 1475 aaKnown RBP11.83□□□□□ -0.52
CELF1-215ENST00000532048 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.52
CELF1-215ENST00000532048 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
CELF1-215ENST00000532048 ABCC5O15440 1437 aa11.83□□□□□ -0.52
CELF1-215ENST00000532048 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
CELF1-215ENST00000532048 ZNF777Q9ULD5 760 aaPredicted RBP11.82□□□□□ -0.52
CELF1-215ENST00000532048 ROCK1Q13464 1354 aa11.81□□□□□ -0.52
CELF1-215ENST00000532048 CFDP1Q9UEE9 299 aaPredicted RBP11.81□□□□□ -0.52
CELF1-215ENST00000532048 RAPGEF6Q8TEU7 1601 aa11.81□□□□□ -0.52
CELF1-215ENST00000532048 HNRNPUQ00839 825 aaKnown RBP eCLIP11.81□□□□□ -0.52
CELF1-215ENST00000532048 PRG4Q92954 1404 aaPredicted RBP11.8□□□□□ -0.52
CELF1-215ENST00000532048 ERCC6Q03468 1493 aa11.8□□□□□ -0.52
CELF1-215ENST00000532048 EIF4G3O43432 1585 aaKnown RBP11.8□□□□□ -0.52
CELF1-215ENST00000532048 ANKRD30BQ9BXX2 1392 aa11.79□□□□□ -0.52
CELF1-215ENST00000532048 DNMT1P26358 1616 aaKnown RBP11.79□□□□□ -0.52
CELF1-215ENST00000532048 MYT1Q01538 1121 aa11.78□□□□□ -0.52
CELF1-215ENST00000532048 NBPF8Q3BBV2 869 aa11.78□□□□□ -0.52
CELF1-215ENST00000532048 C11orf95C9JLR9 678 aaPredicted RBP11.77□□□□□ -0.52
CELF1-215ENST00000532048 PLB1Q6P1J6 1458 aa11.77□□□□□ -0.52
CELF1-215ENST00000532048 TROQ12816 1431 aaPredicted RBP11.77□□□□□ -0.53
CELF1-215ENST00000532048 RPRD2Q5VT52 1461 aaKnown RBP11.76□□□□□ -0.53
CELF1-215ENST00000532048 JPH4Q96JJ6 628 aa11.75□□□□□ -0.53
CELF1-215ENST00000532048 CNTLNQ9NXG0 1405 aa11.75□□□□□ -0.53
CELF1-215ENST00000532048 CAMSAP2Q08AD1 1489 aa11.75□□□□□ -0.53
CELF1-215ENST00000532048 MAGI1Q96QZ7 1491 aaPredicted RBP11.74□□□□□ -0.53
CELF1-215ENST00000532048 CCDC7Q96M83 1385 aa11.74□□□□□ -0.53
CELF1-215ENST00000532048 CARMIL2Q6F5E8 1435 aa11.74□□□□□ -0.53
CELF1-215ENST00000532048 SYNJ2O15056 1496 aa11.74□□□□□ -0.53
CELF1-215ENST00000532048 CEP170Q5SW79 1584 aa11.73□□□□□ -0.53
CELF1-215ENST00000532048 CCDC184Q52MB2 194 aa11.73□□□□□ -0.53
CELF1-215ENST00000532048 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
CELF1-215ENST00000532048 GPATCH8Q9UKJ3 1502 aaKnown RBP11.73□□□□□ -0.53
CELF1-215ENST00000532048 NCOA1Q15788 1441 aa11.72□□□□□ -0.53
CELF1-215ENST00000532048 TEX14Q8IWB6 1497 aa11.72□□□□□ -0.53
CELF1-215ENST00000532048 PLEKHD1A6NEE1 506 aa11.72□□□□□ -0.53
CELF1-215ENST00000532048 FAM9BQ8IZU0 186 aa11.72□□□□□ -0.53
CELF1-215ENST00000532048 PRKRIP1Q9H875 184 aaPredicted RBP11.71□□□□□ -0.53
CELF1-215ENST00000532048 PKD2Q13563 968 aa11.71□□□□□ -0.54
CELF1-215ENST00000532048 KIF14Q15058 1648 aa11.71□□□□□ -0.54
CELF1-215ENST00000532048 KIF7Q2M1P5 1343 aa11.7□□□□□ -0.54
CELF1-215ENST00000532048 IRX6P78412 446 aaPredicted RBP11.7□□□□□ -0.54
CELF1-215ENST00000532048 POLR3GLQ9BT43 218 aa11.7□□□□□ -0.54
CELF1-215ENST00000532048 MRS2Q9HD23 443 aa11.7□□□□□ -0.54
CELF1-215ENST00000532048 PZPP20742 1482 aa11.7□□□□□ -0.54
CELF1-215ENST00000532048 ANKRD30AQ9BXX3 1397 aa11.7□□□□□ -0.54
CELF1-215ENST00000532048 CNGB1Q14028 1251 aaPredicted RBP11.7□□□□□ -0.54
CELF1-215ENST00000532048 ITSN2Q9NZM3 1697 aa11.69□□□□□ -0.54
CELF1-215ENST00000532048 KIAA1107Q9UPP5 1409 aa11.67□□□□□ -0.54
CELF1-215ENST00000532048 SPATA31E1Q6ZUB1 1445 aa11.67□□□□□ -0.54
CELF1-215ENST00000532048 ANKRD50Q9ULJ7 1429 aa11.66□□□□□ -0.54
CELF1-215ENST00000532048 TSPY4P0CV99 314 aa11.66□□□□□ -0.54
CELF1-215ENST00000532048 TSPY10P0CW01 314 aa11.66□□□□□ -0.54
CELF1-215ENST00000532048 NUP160Q12769 1436 aa11.66□□□□□ -0.54
CELF1-215ENST00000532048 ADGBQ8N7X0 1667 aa11.66□□□□□ -0.54
CELF1-215ENST00000532048 ADGRL2O95490 1459 aa11.65□□□□□ -0.54
CELF1-215ENST00000532048 NUP155O75694 1391 aa11.65□□□□□ -0.54
CELF1-215ENST00000532048 ADCY10Q96PN6 1610 aa11.64□□□□□ -0.55
CELF1-215ENST00000532048 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.552e-8■■■■■ 27.8
CELF1-215ENST00000532048 ATP10BO94823 1461 aa11.64□□□□□ -0.55
CELF1-215ENST00000532048 USP47Q96K76 1375 aa11.64□□□□□ -0.55
CELF1-215ENST00000532048 C9orf84Q5VXU9 1444 aa11.63□□□□□ -0.55
CELF1-215ENST00000532048 RBM19Q9Y4C8 960 aaKnown RBP11.62□□□□□ -0.55
CELF1-215ENST00000532048 CROCC2H7BZ55 1655 aa11.62□□□□□ -0.55
CELF1-215ENST00000532048 KDM2AQ9Y2K7 1162 aa11.62□□□□□ -0.55
CELF1-215ENST00000532048 ABCA8O94911 1581 aa11.61□□□□□ -0.55
CELF1-215ENST00000532048 ABCC10Q5T3U5 1492 aa11.6□□□□□ -0.55
CELF1-215ENST00000532048 MBD5Q9P267 1494 aa11.6□□□□□ -0.55
CELF1-215ENST00000532048 CARD11Q9BXL7 1154 aa11.6□□□□□ -0.55
CELF1-215ENST00000532048 CDC42BPAQ5VT25 1732 aa11.6□□□□□ -0.55
CELF1-215ENST00000532048 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
CELF1-215ENST00000532048 PTPRGP23470 1445 aa11.59□□□□□ -0.55
CELF1-215ENST00000532048 KIF15Q9NS87 1388 aa11.59□□□□□ -0.55
CELF1-215ENST00000532048 DCAF11Q8TEB1 546 aa11.58□□□□□ -0.56
CELF1-215ENST00000532048 SHANK2Q9UPX8 1470 aa11.57□□□□□ -0.56
CELF1-215ENST00000532048 POLR1AO95602 1720 aaPredicted RBP11.57□□□□□ -0.56
CELF1-215ENST00000532048 DHX29Q7Z478 1369 aaKnown RBP11.56□□□□□ -0.56
CELF1-215ENST00000532048 ANP32EQ9BTT0 268 aa11.56□□□□□ -0.56
CELF1-215ENST00000532048 BCORL1Q5H9F3 1711 aa11.56□□□□□ -0.56
CELF1-215ENST00000532048 PPP4R2Q9NY27 417 aa11.55□□□□□ -0.56
CELF1-215ENST00000532048 ST20-MTHFSA0A0A6YYL1 179 aa11.55□□□□□ -0.56
CELF1-215ENST00000532048 ERICH6BQ5W0A0 696 aa11.55□□□□□ -0.56
CELF1-215ENST00000532048 SENP3-EIF4A1A0A087X0R7 540 aa11.54□□□□□ -0.56
CELF1-215ENST00000532048 ARID4BQ4LE39 1312 aaPredicted RBP11.54□□□□□ -0.56
CELF1-215ENST00000532048 UHRF1BP1Q6BDS2 1440 aa11.54□□□□□ -0.56
CELF1-215ENST00000532048 KDM5CP41229 1560 aa11.54□□□□□ -0.56
CELF1-215ENST00000532048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.54□□□□□ -0.567e-7■■□□□ 14.2
CELF1-215ENST00000532048 RALGAPBQ86X10 1494 aa11.53□□□□□ -0.56
CELF1-215ENST00000532048 TMC1Q8TDI8 760 aa11.53□□□□□ -0.56
CELF1-215ENST00000532048 RGL3Q3MIN7 710 aa11.52□□□□□ -0.56
CELF1-215ENST00000532048 CCDC141Q6ZP82 1450 aa11.52□□□□□ -0.57
CELF1-215ENST00000532048 B4GALNT3Q6L9W6 998 aa11.52□□□□□ -0.57
CELF1-215ENST00000532048 ROCK2O75116 1388 aaKnown RBP11.52□□□□□ -0.57
CELF1-215ENST00000532048 RSPH4AQ5TD94 716 aa11.52□□□□□ -0.57
CELF1-215ENST00000532048 KDM5DQ9BY66 1539 aa11.51□□□□□ -0.57
CELF1-215ENST00000532048 ARHGEF12Q9NZN5 1544 aa11.51□□□□□ -0.57
CELF1-215ENST00000532048 ARHGEF5Q12774 1597 aa11.51□□□□□ -0.57
CELF1-215ENST00000532048 SAMD9LQ8IVG5 1584 aa11.5□□□□□ -0.57
CELF1-215ENST00000532048 FAM135AQ9P2D6 1515 aa11.49□□□□□ -0.57
CELF1-215ENST00000532048 CCDC144AA2RUR9 1427 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms