RNA–Protein interactions for RNA: ENST00000532048.5

CELF1-215, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 1 (best) BASIC

Gene CELF1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-215ENST00000532048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.21□□□□□ -0.943e-7■■■■■ 136.7
CELF1-215ENST00000532048 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.73□□□□□ -1.172e-27■■■■■ 70.1
CELF1-215ENST00000532048 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.2□□□□□ -0.941e-6■■■■■ 57.5
CELF1-215ENST00000532048 SF3B1O75533 1304 aaKnown RBP eCLIP8.67□□□□□ -1.024e-7■■■■■ 34.5
CELF1-215ENST00000532048 PTBP1P26599 531 aaKnown RBP eCLIP7.85□□□□□ -1.151e-16■■■■■ 31.7
CELF1-215ENST00000532048 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.552e-8■■■■■ 27.8
CELF1-215ENST00000532048 HNRNPKP61978 463 aaKnown RBP eCLIP7.63□□□□□ -1.196e-8■■■■■ 27.1
CELF1-215ENST00000532048 AQRO60306 1485 aaKnown RBP eCLIP12.19□□□□□ -0.462e-7■■■■□ 26.1
CELF1-215ENST00000532048 ILF3Q12906 894 aaKnown RBP eCLIP7.84□□□□□ -1.161e-6■■■■□ 24.6
CELF1-215ENST00000532048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.39□□□□□ -1.399e-7■■■■□ 24.2
CELF1-215ENST00000532048 SRSF7Q16629 238 aaKnown RBP eCLIP7.24□□□□□ -1.251e-6■■■■□ 22.3
CELF1-215ENST00000532048 KHSRPQ92945 711 aaKnown RBP eCLIP8.79□□□□□ -12e-11■■■■□ 21.9
CELF1-215ENST00000532048 EFTUD2Q15029 972 aaKnown RBP eCLIP8.91□□□□□ -0.981e-6■■■■□ 21.5
CELF1-215ENST00000532048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.89□□□□□ -0.994e-8■■■■□ 20.1
CELF1-215ENST00000532048 TARDBPQ13148 414 aaKnown RBP eCLIP8.05□□□□□ -1.121e-7■■■□□ 18.7
CELF1-215ENST00000532048 RBM22Q9NW64 420 aaKnown RBP eCLIP8.59□□□□□ -1.036e-8■■■□□ 18.4
CELF1-215ENST00000532048 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.9□□□□□ -0.821e-6■■■□□ 17.6
CELF1-215ENST00000532048 UPF1Q92900 1129 aaKnown RBP eCLIP8.46□□□□□ -1.068e-10■■■□□ 17.6
CELF1-215ENST00000532048 QKIQ96PU8 341 aaKnown RBP eCLIP8.76□□□□□ -1.018e-8■■■□□ 17.4
CELF1-215ENST00000532048 PCBP2Q15366 365 aaKnown RBP eCLIP8.35□□□□□ -1.074e-7■■■□□ 16.7
CELF1-215ENST00000532048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.83□□□□□ -0.686e-7■■■□□ 16.1
CELF1-215ENST00000532048 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.43□□□□□ -1.069e-6■■■□□ 15.7
CELF1-215ENST00000532048 SF3B4Q15427 424 aaKnown RBP eCLIP7.97□□□□□ -1.131e-6■■■□□ 15.3
CELF1-215ENST00000532048 PPIGQ13427 754 aaKnown RBP eCLIP8.15□□□□□ -1.11e-6■■■□□ 15.3
CELF1-215ENST00000532048 U2AF1Q01081 240 aaKnown RBP eCLIP10.95□□□□□ -0.662e-6■■■□□ 15.1
CELF1-215ENST00000532048 HNRNPCP07910 306 aaKnown RBP eCLIP8.27□□□□□ -1.093e-8■■■□□ 14.9
CELF1-215ENST00000532048 MATR3P43243 847 aaKnown RBP eCLIP9.4□□□□□ -0.93e-9■■■□□ 14.6
CELF1-215ENST00000532048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.54□□□□□ -0.567e-7■■□□□ 14.2
CELF1-215ENST00000532048 RBM15Q96T37 977 aaKnown RBP eCLIP8.99□□□□□ -0.973e-6■■□□□ 12.3
CELF1-215ENST00000532048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.98□□□□□ -0.975e-8■■□□□ 12.1
CELF1-215ENST00000532048 U2AF2P26368 475 aaKnown RBP eCLIP9.78□□□□□ -0.849e-7■■□□□ 12
CELF1-215ENST00000532048 TIA1P31483 386 aaKnown RBP eCLIP8.16□□□□□ -1.11e-8■■□□□ 11.8
CELF1-215ENST00000532048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.68□□□□□ -0.862e-7■□□□□ 10.8
CELF1-215ENST00000532048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.09□□□□□ -0.799e-7■□□□□ 10.7
CELF1-215ENST00000532048 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.23□□□□□ -0.934e-7■□□□□ 9.9
CELF1-215ENST00000532048 ZNF622Q969S3 477 aaKnown RBP eCLIP9.32□□□□□ -0.926e-8■□□□□ 9.1
CELF1-215ENST00000532048 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.9□□□□□ -1.146e-6■□□□□ 8.6
CELF1-215ENST00000532048 YBX3P16989 372 aaKnown RBP eCLIP8.65□□□□□ -1.026e-8■□□□□ 8.4
CELF1-215ENST00000532048 FUBP3Q96I24 572 aaKnown RBP eCLIP8.47□□□□□ -1.053e-6■□□□□ 8.2
Retrieved 39 of 39 RNA–protein pairs in 7.9 ms