RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 ADCY10Q96PN6 1610 aa12.08□□□□□ -0.48
ITGB1-218ENST00000528877 MAPKBP1O60336 1514 aa12.08□□□□□ -0.48
ITGB1-218ENST00000528877 UGGT2Q9NYU1 1516 aa12.08□□□□□ -0.48
ITGB1-218ENST00000528877 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
ITGB1-218ENST00000528877 DCBLD2Q96PD2 775 aa12.07□□□□□ -0.48
ITGB1-218ENST00000528877 DISP1Q96F81 1524 aa12.06□□□□□ -0.48
ITGB1-218ENST00000528877 CARMIL2Q6F5E8 1435 aa12.05□□□□□ -0.48
ITGB1-218ENST00000528877 CTTNBP2Q8WZ74 1663 aa12.05□□□□□ -0.48
ITGB1-218ENST00000528877 ZRANB1Q9UGI0 708 aa12.04□□□□□ -0.48
ITGB1-218ENST00000528877 KIAA0556O60303 1618 aa12.04□□□□□ -0.48
ITGB1-218ENST00000528877 KLHL34Q8N239 644 aa12.02□□□□□ -0.49
ITGB1-218ENST00000528877 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
ITGB1-218ENST00000528877 KIF13AQ9H1H9 1805 aa12.02□□□□□ -0.49
ITGB1-218ENST00000528877 EEA1Q15075 1411 aa12.02□□□□□ -0.49
ITGB1-218ENST00000528877 UHRF1BP1LA0JNW5 1464 aa12.02□□□□□ -0.49
ITGB1-218ENST00000528877 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
ITGB1-218ENST00000528877 PTPRGP23470 1445 aa12□□□□□ -0.49
ITGB1-218ENST00000528877 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
ITGB1-218ENST00000528877 ABCC2Q92887 1545 aa12□□□□□ -0.49
ITGB1-218ENST00000528877 DIP2BQ9P265 1576 aa12□□□□□ -0.49
ITGB1-218ENST00000528877 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
ITGB1-218ENST00000528877 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
ITGB1-218ENST00000528877 NUBP1P53384 320 aa11.96□□□□□ -0.49
ITGB1-218ENST00000528877 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
ITGB1-218ENST00000528877 UACAQ9BZF9 1416 aa11.95□□□□□ -0.5
ITGB1-218ENST00000528877 KDM5BQ9UGL1 1544 aa11.95□□□□□ -0.5
ITGB1-218ENST00000528877 TSPYL2Q9H2G4 693 aaPredicted RBP11.94□□□□□ -0.5
ITGB1-218ENST00000528877 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
ITGB1-218ENST00000528877 KIF21BO75037 1637 aa11.93□□□□□ -0.5
ITGB1-218ENST00000528877 SAMD9Q5K651 1589 aa11.92□□□□□ -0.5
ITGB1-218ENST00000528877 IFNLR1Q8IU57 520 aaPredicted RBP11.92□□□□□ -0.5
ITGB1-218ENST00000528877 GLI2P10070 1586 aa11.92□□□□□ -0.5
ITGB1-218ENST00000528877 PLB1Q6P1J6 1458 aa11.91□□□□□ -0.5
ITGB1-218ENST00000528877 SPOCK2Q92563 424 aa11.91□□□□□ -0.5
ITGB1-218ENST00000528877 ABCA8O94911 1581 aa11.91□□□□□ -0.5
ITGB1-218ENST00000528877 ZCCHC11Q5TAX3 1644 aaKnown RBP11.89□□□□□ -0.51
ITGB1-218ENST00000528877 ASXL2Q76L83 1435 aa11.89□□□□□ -0.51
ITGB1-218ENST00000528877 CCDC61Q9Y6R9 512 aa11.89□□□□□ -0.51
ITGB1-218ENST00000528877 GSE1Q14687 1217 aa11.87□□□□□ -0.51
ITGB1-218ENST00000528877 FAM69CQ0P6D2 419 aa11.85□□□□□ -0.51
ITGB1-218ENST00000528877 PHF12Q96QT6 1004 aa11.85□□□□□ -0.51
ITGB1-218ENST00000528877 MAP3K4Q9Y6R4 1608 aa11.85□□□□□ -0.51
ITGB1-218ENST00000528877 EPRSP07814 1512 aaKnown RBP11.85□□□□□ -0.51
ITGB1-218ENST00000528877 PPRC1Q5VV67 1664 aaKnown RBP11.84□□□□□ -0.51
ITGB1-218ENST00000528877 WDR7Q9Y4E6 1490 aa11.84□□□□□ -0.51
ITGB1-218ENST00000528877 DCAF8Q5TAQ9 597 aa11.84□□□□□ -0.51
ITGB1-218ENST00000528877 EFCAB5A4FU69 1503 aa11.84□□□□□ -0.51
ITGB1-218ENST00000528877 KDM6BO15054 1643 aa11.81□□□□□ -0.52
ITGB1-218ENST00000528877 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
ITGB1-218ENST00000528877 RAPGEF6Q8TEU7 1601 aa11.79□□□□□ -0.52
ITGB1-218ENST00000528877 TTBK1Q5TCY1 1321 aaPredicted RBP11.79□□□□□ -0.52
ITGB1-218ENST00000528877 KIF12Q96FN5 646 aa11.78□□□□□ -0.52
ITGB1-218ENST00000528877 CFAP43Q8NDM7 1665 aa11.78□□□□□ -0.52
ITGB1-218ENST00000528877 TEX14Q8IWB6 1497 aa11.77□□□□□ -0.52
ITGB1-218ENST00000528877 TSPOAP1O95153 1857 aa11.76□□□□□ -0.53
ITGB1-218ENST00000528877 NUP153P49790 1475 aaKnown RBP11.76□□□□□ -0.53
ITGB1-218ENST00000528877 POTEB2H3BUK9 544 aa11.75□□□□□ -0.53
ITGB1-218ENST00000528877 GALR2O43603 387 aaPredicted RBP11.75□□□□□ -0.53
ITGB1-218ENST00000528877 ATP10BO94823 1461 aa11.75□□□□□ -0.53
ITGB1-218ENST00000528877 MAGI3Q5TCQ9 1506 aa11.75□□□□□ -0.53
ITGB1-218ENST00000528877 FHOD3Q2V2M9 1422 aa11.74□□□□□ -0.53
ITGB1-218ENST00000528877 ABCA9Q8IUA7 1624 aa11.73□□□□□ -0.53
ITGB1-218ENST00000528877 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
ITGB1-218ENST00000528877 MAP3K13O43283 966 aa11.72□□□□□ -0.53
ITGB1-218ENST00000528877 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
ITGB1-218ENST00000528877 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
ITGB1-218ENST00000528877 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.53
ITGB1-218ENST00000528877 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
ITGB1-218ENST00000528877 ARHGAP35Q9NRY4 1499 aa11.7□□□□□ -0.54
ITGB1-218ENST00000528877 COL17A1Q9UMD9 1497 aaPredicted RBP11.69□□□□□ -0.54
ITGB1-218ENST00000528877 CD109Q6YHK3 1445 aa11.69□□□□□ -0.54
ITGB1-218ENST00000528877 PYGBP11216 843 aa11.68□□□□□ -0.54
ITGB1-218ENST00000528877 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
ITGB1-218ENST00000528877 FMN1Q68DA7 1419 aa11.68□□□□□ -0.54
ITGB1-218ENST00000528877 HECW1Q76N89 1606 aa11.67□□□□□ -0.54
ITGB1-218ENST00000528877 MAMSTRQ6ZN01 415 aa11.66□□□□□ -0.54
ITGB1-218ENST00000528877 ARAP3Q8WWN8 1544 aa11.65□□□□□ -0.54
ITGB1-218ENST00000528877 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
ITGB1-218ENST00000528877 PHLDB1Q86UU1 1377 aa11.64□□□□□ -0.55
ITGB1-218ENST00000528877 NEO1Q92859 1461 aa11.63□□□□□ -0.55
ITGB1-218ENST00000528877 TIE1P35590 1138 aa11.63□□□□□ -0.55
ITGB1-218ENST00000528877 CDK13Q14004 1512 aaKnown RBP11.61□□□□□ -0.55
ITGB1-218ENST00000528877 UBTFP17480 764 aaKnown RBP11.61□□□□□ -0.55
ITGB1-218ENST00000528877 ASTLQ6HA08 431 aaPredicted RBP11.61□□□□□ -0.55
ITGB1-218ENST00000528877 IFNL1Q8IU54 200 aa11.61□□□□□ -0.55
ITGB1-218ENST00000528877 TTC37Q6PGP7 1564 aa11.61□□□□□ -0.55
ITGB1-218ENST00000528877 CFAP74Q9C0B2 1584 aa11.61□□□□□ -0.55
ITGB1-218ENST00000528877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.6□□□□□ -0.551e-9■■■□□ 15
ITGB1-218ENST00000528877 KCNH8Q96L42 1107 aa11.59□□□□□ -0.55
ITGB1-218ENST00000528877 PCF11O94913 1555 aaKnown RBP11.58□□□□□ -0.55
ITGB1-218ENST00000528877 FRMPD1Q5SYB0 1578 aa11.58□□□□□ -0.55
ITGB1-218ENST00000528877 ARID3CA6NKF2 412 aa11.58□□□□□ -0.56
ITGB1-218ENST00000528877 RANGAP1P46060 587 aaPredicted RBP11.58□□□□□ -0.56
ITGB1-218ENST00000528877 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
ITGB1-218ENST00000528877 FYCO1Q9BQS8 1478 aa11.57□□□□□ -0.56
ITGB1-218ENST00000528877 CASKIN1Q8WXD9 1431 aa11.57□□□□□ -0.56
ITGB1-218ENST00000528877 LRRIQ1Q96JM4 1722 aa11.57□□□□□ -0.56
ITGB1-218ENST00000528877 ATMINO43313 823 aaPredicted RBP11.56□□□□□ -0.56
ITGB1-218ENST00000528877 LCE2DQ5TA82 110 aaPredicted RBP11.56□□□□□ -0.56
ITGB1-218ENST00000528877 KIF14Q15058 1648 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms