RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 STRCQ7RTU9 1775 aa9.63□□□□□ -0.87
SDC2-206ENST00000521590 C19orf67A6NJJ6 358 aa9.63□□□□□ -0.87
SDC2-206ENST00000521590 UHRF1BP1LA0JNW5 1464 aa9.63□□□□□ -0.87
SDC2-206ENST00000521590 RIMS1Q86UR5 1692 aaKnown RBP9.63□□□□□ -0.87
SDC2-206ENST00000521590 KDM5BQ9UGL1 1544 aa9.61□□□□□ -0.87
SDC2-206ENST00000521590 ZCCHC11Q5TAX3 1644 aaKnown RBP9.61□□□□□ -0.87
SDC2-206ENST00000521590 WRNQ14191 1432 aaPredicted RBP eCLIP9.61□□□□□ -0.87
SDC2-206ENST00000521590 MAGI3Q5TCQ9 1506 aa9.61□□□□□ -0.87
SDC2-206ENST00000521590 CFAP43Q8NDM7 1665 aa9.61□□□□□ -0.87
SDC2-206ENST00000521590 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
SDC2-206ENST00000521590 TTBK1Q5TCY1 1321 aaPredicted RBP9.57□□□□□ -0.88
SDC2-206ENST00000521590 ARAP3Q8WWN8 1544 aa9.57□□□□□ -0.88
SDC2-206ENST00000521590 BIVM-ERCC5R4GMW8 1640 aa9.56□□□□□ -0.88
SDC2-206ENST00000521590 TNIKQ9UKE5 1360 aa9.56□□□□□ -0.88
SDC2-206ENST00000521590 CD109Q6YHK3 1445 aa9.56□□□□□ -0.88
SDC2-206ENST00000521590 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
SDC2-206ENST00000521590 LTBP4Q8N2S1 1624 aa9.55□□□□□ -0.88
SDC2-206ENST00000521590 GABBR2O75899 941 aa9.54□□□□□ -0.88
SDC2-206ENST00000521590 MED1Q15648 1581 aaPredicted RBP9.54□□□□□ -0.88
SDC2-206ENST00000521590 IQSEC2Q5JU85 1478 aa9.53□□□□□ -0.88
SDC2-206ENST00000521590 WDR7Q9Y4E6 1490 aa9.53□□□□□ -0.88
SDC2-206ENST00000521590 YEATS2Q9ULM3 1422 aa9.52□□□□□ -0.89
SDC2-206ENST00000521590 PREX1Q8TCU6 1659 aa9.51□□□□□ -0.89
SDC2-206ENST00000521590 PRR29P0C7W0 189 aa9.51□□□□□ -0.89
SDC2-206ENST00000521590 SIGLEC1Q9BZZ2 1709 aa9.5□□□□□ -0.89
SDC2-206ENST00000521590 CARMIL2Q6F5E8 1435 aa9.49□□□□□ -0.89
SDC2-206ENST00000521590 FRMPD1Q5SYB0 1578 aa9.48□□□□□ -0.89
SDC2-206ENST00000521590 ARID4BQ4LE39 1312 aaPredicted RBP9.48□□□□□ -0.89
SDC2-206ENST00000521590 DISP1Q96F81 1524 aa9.46□□□□□ -0.89
SDC2-206ENST00000521590 FER1L4A9Z1Z3 1794 aa9.46□□□□□ -0.9
SDC2-206ENST00000521590 RAPGEF3O95398 923 aa9.46□□□□□ -0.9
SDC2-206ENST00000521590 PTPRTO14522 1441 aa9.46□□□□□ -0.9
SDC2-206ENST00000521590 TTC37Q6PGP7 1564 aa9.46□□□□□ -0.9
SDC2-206ENST00000521590 CSRNP3Q8WYN3 585 aa9.45□□□□□ -0.9
SDC2-206ENST00000521590 KCNH8Q96L42 1107 aa9.44□□□□□ -0.9
SDC2-206ENST00000521590 SETD1BQ9UPS6 1966 aaKnown RBP9.43□□□□□ -0.9
SDC2-206ENST00000521590 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
SDC2-206ENST00000521590 ARHGEF40Q8TER5 1519 aa9.41□□□□□ -0.9
SDC2-206ENST00000521590 PHLDB1Q86UU1 1377 aa9.41□□□□□ -0.9
SDC2-206ENST00000521590 IGF1RP08069 1367 aa9.4□□□□□ -0.9
SDC2-206ENST00000521590 RICTORQ6R327 1708 aa9.4□□□□□ -0.9
SDC2-206ENST00000521590 UBAP1LF5GYI3 381 aa9.4□□□□□ -0.9
SDC2-206ENST00000521590 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.9
SDC2-206ENST00000521590 CD44P16070 742 aaKnown RBP9.39□□□□□ -0.91
SDC2-206ENST00000521590 LHX8Q68G74 356 aa9.39□□□□□ -0.91
SDC2-206ENST00000521590 ABCA9Q8IUA7 1624 aa9.38□□□□□ -0.91
SDC2-206ENST00000521590 POTEIP0CG38 1075 aa9.38□□□□□ -0.91
SDC2-206ENST00000521590 HSPA1LP34931 641 aa9.38□□□□□ -0.91
SDC2-206ENST00000521590 SRCAPQ6ZRS2 3230 aa9.37□□□□□ -0.91
SDC2-206ENST00000521590 FANCAO15360 1455 aa9.36□□□□□ -0.91
SDC2-206ENST00000521590 NEO1Q92859 1461 aa9.36□□□□□ -0.91
SDC2-206ENST00000521590 POGZQ7Z3K3 1410 aa9.36□□□□□ -0.91
SDC2-206ENST00000521590 KIAA0556O60303 1618 aa9.35□□□□□ -0.91
SDC2-206ENST00000521590 CEBPAP49715 358 aaPredicted RBP9.35□□□□□ -0.91
SDC2-206ENST00000521590 UGGT2Q9NYU1 1516 aa9.34□□□□□ -0.91
SDC2-206ENST00000521590 ARHGEF12Q9NZN5 1544 aa9.34□□□□□ -0.91
SDC2-206ENST00000521590 ABCA8O94911 1581 aa9.33□□□□□ -0.92
SDC2-206ENST00000521590 UHRF1BP1Q6BDS2 1440 aa9.33□□□□□ -0.92
SDC2-206ENST00000521590 RGS17Q9UGC6 210 aaPredicted RBP9.33□□□□□ -0.92
SDC2-206ENST00000521590 MLECQ14165 292 aa9.31□□□□□ -0.92
SDC2-206ENST00000521590 ZNF335Q9H4Z2 1342 aaPredicted RBP9.31□□□□□ -0.92
SDC2-206ENST00000521590 ZMYM4Q5VZL5 1548 aa9.3□□□□□ -0.92
SDC2-206ENST00000521590 NCOA1Q15788 1441 aa9.3□□□□□ -0.92
SDC2-206ENST00000521590 AKNAQ7Z591 1439 aa9.3□□□□□ -0.92
SDC2-206ENST00000521590 C3P01024 1663 aa9.29□□□□□ -0.92
SDC2-206ENST00000521590 CREBZFQ9NS37 354 aa9.29□□□□□ -0.92
SDC2-206ENST00000521590 FHOD3Q2V2M9 1422 aa9.29□□□□□ -0.92
SDC2-206ENST00000521590 CARMIL1Q5VZK9 1371 aa9.28□□□□□ -0.92
SDC2-206ENST00000521590 ZFYVE16Q7Z3T8 1539 aa9.28□□□□□ -0.92
SDC2-206ENST00000521590 DENND4BO75064 1496 aaPredicted RBP9.28□□□□□ -0.92
SDC2-206ENST00000521590 EFCAB5A4FU69 1503 aa9.27□□□□□ -0.93
SDC2-206ENST00000521590 SETD1AO15047 1707 aaKnown RBP9.26□□□□□ -0.93
SDC2-206ENST00000521590 ALKQ9UM73 1620 aa9.25□□□□□ -0.93
SDC2-206ENST00000521590 PIP4K2BP78356 416 aa9.25□□□□□ -0.93
SDC2-206ENST00000521590 CAMSAP1Q5T5Y3 1602 aa9.24□□□□□ -0.93
SDC2-206ENST00000521590 HECW1Q76N89 1606 aa9.24□□□□□ -0.93
SDC2-206ENST00000521590 KIF27Q86VH2 1401 aa9.24□□□□□ -0.93
SDC2-206ENST00000521590 ATP10BO94823 1461 aa9.24□□□□□ -0.93
SDC2-206ENST00000521590 MAGI2Q86UL8 1455 aa9.24□□□□□ -0.93
SDC2-206ENST00000521590 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
SDC2-206ENST00000521590 ZRANB1Q9UGI0 708 aa9.23□□□□□ -0.93
SDC2-206ENST00000521590 POTEAQ6S8J7 498 aa9.22□□□□□ -0.93
SDC2-206ENST00000521590 CLCN6P51797 869 aa9.21□□□□□ -0.94
SDC2-206ENST00000521590 NCKAP5LQ9HCH0 1330 aa9.21□□□□□ -0.94
SDC2-206ENST00000521590 TOM1O60784 492 aa9.2□□□□□ -0.94
SDC2-206ENST00000521590 EHMT2Q96KQ7 1210 aa9.2□□□□□ -0.94
SDC2-206ENST00000521590 ATP10AO60312 1499 aa9.2□□□□□ -0.94
SDC2-206ENST00000521590 SPDYE4A6NLX3 237 aa9.19□□□□□ -0.94
SDC2-206ENST00000521590 TRAPPC8Q9Y2L5 1435 aa9.19□□□□□ -0.94
SDC2-206ENST00000521590 CFAP74Q9C0B2 1584 aa9.19□□□□□ -0.94
SDC2-206ENST00000521590 SUPT6HQ7KZ85 1726 aaKnown RBP9.19□□□□□ -0.94
SDC2-206ENST00000521590 GALR2O43603 387 aaPredicted RBP9.18□□□□□ -0.94
SDC2-206ENST00000521590 DCBLD2Q96PD2 775 aa9.18□□□□□ -0.94
SDC2-206ENST00000521590 CTTNBP2Q8WZ74 1663 aa9.17□□□□□ -0.94
SDC2-206ENST00000521590 ARID3CA6NKF2 412 aa9.17□□□□□ -0.94
SDC2-206ENST00000521590 STAG3Q9UJ98 1225 aa9.17□□□□□ -0.94
SDC2-206ENST00000521590 C9orf84Q5VXU9 1444 aa9.16□□□□□ -0.94
SDC2-206ENST00000521590 TCOF1Q13428 1488 aaKnown RBP9.15□□□□□ -0.94
SDC2-206ENST00000521590 UPF1Q92900 1129 aaKnown RBP eCLIP9.14□□□□□ -0.95
SDC2-206ENST00000521590 GOLGA3Q08378 1498 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms