RNA–Protein interactions for RNA: ENST00000520475.5

PTK2-222, Transcript of protein tyrosine kinase 2, human

TSL 5

Gene PTK2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-222	ENST00000520475	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.8	□□□□□ -0.52
PTK2-222	ENST00000520475	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.8	□□□□□ -0.52
PTK2-222	ENST00000520475	CASKIN1	Q8WXD9	1431 aa		11.79	□□□□□ -0.52
PTK2-222	ENST00000520475	ARID3C	A6NKF2	412 aa		11.79	□□□□□ -0.52
PTK2-222	ENST00000520475	NUP153	P49790	1475 aa	Known RBP	11.78	□□□□□ -0.52
PTK2-222	ENST00000520475	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.78	□□□□□ -0.52
PTK2-222	ENST00000520475	RAPGEF6	Q8TEU7	1601 aa		11.78	□□□□□ -0.52
PTK2-222	ENST00000520475	WDR7	Q9Y4E6	1490 aa		11.77	□□□□□ -0.52
PTK2-222	ENST00000520475	MAGI3	Q5TCQ9	1506 aa		11.77	□□□□□ -0.52
PTK2-222	ENST00000520475	ADAMTSL3	P82987	1691 aa		11.76	□□□□□ -0.53
PTK2-222	ENST00000520475	KCNH8	Q96L42	1107 aa		11.76	□□□□□ -0.53
PTK2-222	ENST00000520475	CD109	Q6YHK3	1445 aa		11.76	□□□□□ -0.53
PTK2-222	ENST00000520475	PTPRM	P28827	1452 aa		11.75	□□□□□ -0.53
PTK2-222	ENST00000520475	SOCS7	O14512	581 aa		11.74	□□□□□ -0.53
PTK2-222	ENST00000520475	VPS8	Q8N3P4	1428 aa		11.74	□□□□□ -0.53
PTK2-222	ENST00000520475	ABCB7	O75027	752 aa		11.73	□□□□□ -0.53
PTK2-222	ENST00000520475	PCF11	O94913	1555 aa	Known RBP	11.73	□□□□□ -0.53
PTK2-222	ENST00000520475	MYCN	P04198	464 aa	Predicted RBP	11.73	□□□□□ -0.53
PTK2-222	ENST00000520475	FYCO1	Q9BQS8	1478 aa		11.73	□□□□□ -0.53
PTK2-222	ENST00000520475	ARAP3	Q8WWN8	1544 aa		11.7	□□□□□ -0.54
PTK2-222	ENST00000520475	HECW1	Q76N89	1606 aa		11.7	□□□□□ -0.54
PTK2-222	ENST00000520475	CCDC18	Q5T9S5	1454 aa		11.7	□□□□□ -0.54
PTK2-222	ENST00000520475	BCORL1	Q5H9F3	1711 aa		11.69	□□□□□ -0.54
PTK2-222	ENST00000520475	DISP3	Q9P2K9	1392 aa		11.68	□□□□□ -0.54
PTK2-222	ENST00000520475	CDK13	Q14004	1512 aa	Known RBP	11.67	□□□□□ -0.54
PTK2-222	ENST00000520475	CERK	Q8TCT0	537 aa		11.67	□□□□□ -0.54
PTK2-222	ENST00000520475	PHLDB1	Q86UU1	1377 aa		11.67	□□□□□ -0.54
PTK2-222	ENST00000520475	ILDR2	Q71H61	639 aa		11.66	□□□□□ -0.54
PTK2-222	ENST00000520475	MADD	Q8WXG6	1647 aa		11.66	□□□□□ -0.54
PTK2-222	ENST00000520475	TRO	Q12816	1431 aa	Predicted RBP	11.65	□□□□□ -0.54
PTK2-222	ENST00000520475	MAP3K1	Q13233	1512 aa		11.65	□□□□□ -0.55
PTK2-222	ENST00000520475	KANK4	Q5T7N3	995 aa	Predicted RBP	11.64	□□□□□ -0.55
PTK2-222	ENST00000520475	RIMS1	Q86UR5	1692 aa	Known RBP	11.64	□□□□□ -0.55
PTK2-222	ENST00000520475	MTUS2	Q5JR59	1369 aa		11.64	□□□□□ -0.55
PTK2-222	ENST00000520475	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.63	□□□□□ -0.55
PTK2-222	ENST00000520475	FOXD4L1	Q9NU39	408 aa		11.63	□□□□□ -0.55
PTK2-222	ENST00000520475	LRRIQ1	Q96JM4	1722 aa		11.6	□□□□□ -0.55
PTK2-222	ENST00000520475	EFCAB2	Q5VUJ9	269 aa		11.6	□□□□□ -0.55
PTK2-222	ENST00000520475	ABCA9	Q8IUA7	1624 aa		11.6	□□□□□ -0.55
PTK2-222	ENST00000520475	HSPA2	P54652	639 aa		11.59	□□□□□ -0.55
PTK2-222	ENST00000520475	PLCH2	O75038	1416 aa		11.59	□□□□□ -0.55
PTK2-222	ENST00000520475	LRRC9	Q6ZRR7	1453 aa		11.58	□□□□□ -0.56
PTK2-222	ENST00000520475	RAPGEF3	O95398	923 aa		11.58	□□□□□ -0.56
PTK2-222	ENST00000520475	TIAM1	Q13009	1591 aa		11.58	□□□□□ -0.56
PTK2-222	ENST00000520475	NEO1	Q92859	1461 aa		11.57	□□□□□ -0.56
PTK2-222	ENST00000520475	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.57	□□□□□ -0.56
PTK2-222	ENST00000520475	SPATA31D1	Q6ZQQ2	1576 aa		11.57	□□□□□ -0.56
PTK2-222	ENST00000520475	CCNB3	Q8WWL7	1395 aa		11.55	□□□□□ -0.56
PTK2-222	ENST00000520475	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.55	□□□□□ -0.56
PTK2-222	ENST00000520475	POGZ	Q7Z3K3	1410 aa		11.54	□□□□□ -0.56
PTK2-222	ENST00000520475	SETD1B	Q9UPS6	1966 aa	Known RBP	11.54	□□□□□ -0.56
PTK2-222	ENST00000520475	FRMPD1	Q5SYB0	1578 aa		11.54	□□□□□ -0.56
PTK2-222	ENST00000520475	KIF14	Q15058	1648 aa		11.53	□□□□□ -0.56
PTK2-222	ENST00000520475	EHBP1L1	Q8N3D4	1523 aa		11.53	□□□□□ -0.56
PTK2-222	ENST00000520475	ARHGEF40	Q8TER5	1519 aa		11.53	□□□□□ -0.56
PTK2-222	ENST00000520475	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.53	□□□□□ -0.56
PTK2-222	ENST00000520475	FER1L4	A9Z1Z3	1794 aa		11.53	□□□□□ -0.56
PTK2-222	ENST00000520475	PREX1	Q8TCU6	1659 aa		11.52	□□□□□ -0.56
PTK2-222	ENST00000520475	RICTOR	Q6R327	1708 aa		11.52	□□□□□ -0.56
PTK2-222	ENST00000520475	FANCA	O15360	1455 aa		11.52	□□□□□ -0.56
PTK2-222	ENST00000520475	NCOA2	Q15596	1464 aa		11.51	□□□□□ -0.57
PTK2-222	ENST00000520475	POLA2	Q14181	598 aa		11.51	□□□□□ -0.57
PTK2-222	ENST00000520475	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.51	□□□□□ -0.57
PTK2-222	ENST00000520475	AKNA	Q7Z591	1439 aa		11.51	□□□□□ -0.57
PTK2-222	ENST00000520475	RSPH4A	Q5TD94	716 aa		11.5	□□□□□ -0.57
PTK2-222	ENST00000520475	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.5	□□□□□ -0.57
PTK2-222	ENST00000520475	TTC37	Q6PGP7	1564 aa		11.5	□□□□□ -0.57
PTK2-222	ENST00000520475	STRC	Q7RTU9	1775 aa		11.49	□□□□□ -0.57
PTK2-222	ENST00000520475	CFAP74	Q9C0B2	1584 aa		11.49	□□□□□ -0.57
PTK2-222	ENST00000520475	YEATS2	Q9ULM3	1422 aa		11.48	□□□□□ -0.57
PTK2-222	ENST00000520475	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.47	□□□□□ -0.57
PTK2-222	ENST00000520475	DENND4B	O75064	1496 aa	Predicted RBP	11.47	□□□□□ -0.57
PTK2-222	ENST00000520475	SCAPER	Q9BY12	1400 aa		11.47	□□□□□ -0.57
PTK2-222	ENST00000520475	ZNF644	Q9H582	1327 aa	Predicted RBP	11.47	□□□□□ -0.57
PTK2-222	ENST00000520475	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.47	□□□□□ -0.57	2e-6	■■■■□ 19.5
PTK2-222	ENST00000520475	ARHGAP5	Q13017	1502 aa		11.46	□□□□□ -0.57
PTK2-222	ENST00000520475	MIA2	Q96PC5	1412 aa		11.46	□□□□□ -0.57
PTK2-222	ENST00000520475	KIAA1107	Q9UPP5	1409 aa		11.46	□□□□□ -0.57
PTK2-222	ENST00000520475	MYOM3	Q5VTT5	1437 aa		11.45	□□□□□ -0.58
PTK2-222	ENST00000520475	ZBTB22	O15209	634 aa		11.45	□□□□□ -0.58
PTK2-222	ENST00000520475	AFAP1	Q8N556	730 aa		11.45	□□□□□ -0.58
PTK2-222	ENST00000520475	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.45	□□□□□ -0.58
PTK2-222	ENST00000520475	SIGLEC1	Q9BZZ2	1709 aa		11.44	□□□□□ -0.58
PTK2-222	ENST00000520475	MYO5C	Q9NQX4	1742 aa		11.44	□□□□□ -0.58
PTK2-222	ENST00000520475	ZMYM4	Q5VZL5	1548 aa		11.44	□□□□□ -0.58
PTK2-222	ENST00000520475	ZFYVE16	Q7Z3T8	1539 aa		11.44	□□□□□ -0.58
PTK2-222	ENST00000520475	CDC42BPB	Q9Y5S2	1711 aa		11.43	□□□□□ -0.58
PTK2-222	ENST00000520475	MAGI2	Q86UL8	1455 aa		11.43	□□□□□ -0.58
PTK2-222	ENST00000520475	PLEKHH2	Q8IVE3	1493 aa		11.43	□□□□□ -0.58
PTK2-222	ENST00000520475	CDC42BPA	Q5VT25	1732 aa		11.43	□□□□□ -0.58
PTK2-222	ENST00000520475	TSPY4	P0CV99	314 aa		11.42	□□□□□ -0.58
PTK2-222	ENST00000520475	TSPY10	P0CW01	314 aa		11.42	□□□□□ -0.58
PTK2-222	ENST00000520475	PREX2	Q70Z35	1606 aa		11.42	□□□□□ -0.58
PTK2-222	ENST00000520475	IQSEC2	Q5JU85	1478 aa		11.41	□□□□□ -0.58
PTK2-222	ENST00000520475	MLEC	Q14165	292 aa		11.4	□□□□□ -0.58
PTK2-222	ENST00000520475	FGD6	Q6ZV73	1430 aa		11.4	□□□□□ -0.58
PTK2-222	ENST00000520475	ARHGEF12	Q9NZN5	1544 aa		11.4	□□□□□ -0.59
PTK2-222	ENST00000520475	MBD5	Q9P267	1494 aa		11.39	□□□□□ -0.59
PTK2-222	ENST00000520475	PTPRT	O14522	1441 aa		11.39	□□□□□ -0.59
PTK2-222	ENST00000520475	FAM50A	Q14320	339 aa	Known RBP	11.39	□□□□□ -0.59

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