RNA–Protein interactions for RNA: ENST00000514561.5

SEC24D-214, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 3,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-214ENST00000514561 SENP3-EIF4A1A0A087X0R7 540 aa6.54□□□□□ -1.36
SEC24D-214ENST00000514561 DHX37Q8IY37 1157 aaKnown RBP6.54□□□□□ -1.36
SEC24D-214ENST00000514561 UGGT2Q9NYU1 1516 aa6.54□□□□□ -1.36
SEC24D-214ENST00000514561 KCNH8Q96L42 1107 aa6.53□□□□□ -1.36
SEC24D-214ENST00000514561 ERICH6BQ5W0A0 696 aa6.53□□□□□ -1.36
SEC24D-214ENST00000514561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.53□□□□□ -1.36
SEC24D-214ENST00000514561 POLA1P09884 1462 aaPredicted RBP6.52□□□□□ -1.37
SEC24D-214ENST00000514561 MAGI1Q96QZ7 1491 aaPredicted RBP6.52□□□□□ -1.37
SEC24D-214ENST00000514561 FHOD3Q2V2M9 1422 aa6.52□□□□□ -1.37
SEC24D-214ENST00000514561 MAPKBP1O60336 1514 aa6.51□□□□□ -1.37
SEC24D-214ENST00000514561 ERCC6Q03468 1493 aa6.51□□□□□ -1.37
SEC24D-214ENST00000514561 ZNF428Q96B54 188 aa6.51□□□□□ -1.37
SEC24D-214ENST00000514561 EIF4G3O43432 1585 aaKnown RBP6.51□□□□□ -1.37
SEC24D-214ENST00000514561 NESP48681 1621 aa6.51□□□□□ -1.37
SEC24D-214ENST00000514561 FAM9BQ8IZU0 186 aa6.5□□□□□ -1.37
SEC24D-214ENST00000514561 HNRNPUQ00839 825 aaKnown RBP eCLIP6.5□□□□□ -1.37
SEC24D-214ENST00000514561 TSPY4P0CV99 314 aa6.5□□□□□ -1.37
SEC24D-214ENST00000514561 TSPY10P0CW01 314 aa6.5□□□□□ -1.37
SEC24D-214ENST00000514561 CFDP1Q9UEE9 299 aaPredicted RBP6.5□□□□□ -1.37
SEC24D-214ENST00000514561 CLASP1Q7Z460 1538 aa6.5□□□□□ -1.37
SEC24D-214ENST00000514561 SALL2Q9Y467 1007 aaPredicted RBP6.49□□□□□ -1.37
SEC24D-214ENST00000514561 FHAD1B1AJZ9 1412 aa6.49□□□□□ -1.37
SEC24D-214ENST00000514561 DEKP35659 375 aaKnown RBP6.49□□□□□ -1.37
SEC24D-214ENST00000514561 FGD5Q6ZNL6 1462 aa6.49□□□□□ -1.37
SEC24D-214ENST00000514561 RAD54L2Q9Y4B4 1467 aa6.49□□□□□ -1.37
SEC24D-214ENST00000514561 PLEKHD1A6NEE1 506 aa6.48□□□□□ -1.37
SEC24D-214ENST00000514561 ARHGEF11O15085 1522 aa6.48□□□□□ -1.37
SEC24D-214ENST00000514561 RAB3GAP2Q9H2M9 1393 aa6.48□□□□□ -1.37
SEC24D-214ENST00000514561 LRRIQ1Q96JM4 1722 aa6.48□□□□□ -1.37
SEC24D-214ENST00000514561 CHGAP10645 457 aaKnown RBP6.48□□□□□ -1.37
SEC24D-214ENST00000514561 RGL3Q3MIN7 710 aa6.48□□□□□ -1.37
SEC24D-214ENST00000514561 IGF1RP08069 1367 aa6.48□□□□□ -1.37
SEC24D-214ENST00000514561 BRPF1P55201 1214 aaPredicted RBP6.47□□□□□ -1.37
SEC24D-214ENST00000514561 IRX6P78412 446 aaPredicted RBP6.47□□□□□ -1.37
SEC24D-214ENST00000514561 CNKSR2Q8WXI2 1034 aa6.47□□□□□ -1.37
SEC24D-214ENST00000514561 IQGAP2Q13576 1575 aa6.46□□□□□ -1.37
SEC24D-214ENST00000514561 RRBP1Q9P2E9 1410 aaKnown RBP6.46□□□□□ -1.38
SEC24D-214ENST00000514561 NUP160Q12769 1436 aa6.45□□□□□ -1.38
SEC24D-214ENST00000514561 FOXD4L1Q9NU39 408 aa6.45□□□□□ -1.38
SEC24D-214ENST00000514561 IFNLR1Q8IU57 520 aaPredicted RBP6.45□□□□□ -1.38
SEC24D-214ENST00000514561 BCORL1Q5H9F3 1711 aa6.45□□□□□ -1.38
SEC24D-214ENST00000514561 EIF4G2P78344 907 aaKnown RBP eCLIP6.44□□□□□ -1.38
SEC24D-214ENST00000514561 SETD5Q9C0A6 1442 aa6.44□□□□□ -1.38
SEC24D-214ENST00000514561 MRS2Q9HD23 443 aa6.44□□□□□ -1.38
SEC24D-214ENST00000514561 ARHGAP35Q9NRY4 1499 aa6.43□□□□□ -1.38
SEC24D-214ENST00000514561 PPP1R15AO75807 674 aaPredicted RBP6.43□□□□□ -1.38
SEC24D-214ENST00000514561 PDIA4P13667 645 aaKnown RBP6.43□□□□□ -1.38
SEC24D-214ENST00000514561 ARAP1Q96P48 1450 aa6.43□□□□□ -1.38
SEC24D-214ENST00000514561 KDM5BQ9UGL1 1544 aa6.42□□□□□ -1.38
SEC24D-214ENST00000514561 CFAP44Q96MT7 982 aa6.42□□□□□ -1.38
SEC24D-214ENST00000514561 ARAP3Q8WWN8 1544 aa6.42□□□□□ -1.38
SEC24D-214ENST00000514561 WASHC2AQ641Q2 1341 aa6.42□□□□□ -1.38
SEC24D-214ENST00000514561 GRIN2BQ13224 1484 aa6.41□□□□□ -1.38
SEC24D-214ENST00000514561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.41□□□□□ -1.38
SEC24D-214ENST00000514561 FMN1Q68DA7 1419 aa6.41□□□□□ -1.38
SEC24D-214ENST00000514561 C11orf95C9JLR9 678 aaPredicted RBP6.4□□□□□ -1.38
SEC24D-214ENST00000514561 CCER2I3L3R5 266 aa6.4□□□□□ -1.38
SEC24D-214ENST00000514561 TMC1Q8TDI8 760 aa6.4□□□□□ -1.39
SEC24D-214ENST00000514561 UHRF1BP1LA0JNW5 1464 aa6.39□□□□□ -1.39
SEC24D-214ENST00000514561 CHD1O14646 1710 aa6.39□□□□□ -1.39
SEC24D-214ENST00000514561 RGS22Q8NE09 1264 aa6.39□□□□□ -1.39
SEC24D-214ENST00000514561 KIAA0556O60303 1618 aa6.39□□□□□ -1.39
SEC24D-214ENST00000514561 PHLDB1Q86UU1 1377 aa6.39□□□□□ -1.39
SEC24D-214ENST00000514561 WASHC2CQ9Y4E1 1318 aa6.38□□□□□ -1.39
SEC24D-214ENST00000514561 SYNJ2O15056 1496 aa6.38□□□□□ -1.39
SEC24D-214ENST00000514561 SNAPC4Q5SXM2 1469 aa6.38□□□□□ -1.39
SEC24D-214ENST00000514561 ABCA8O94911 1581 aa6.38□□□□□ -1.39
SEC24D-214ENST00000514561 CROCC2H7BZ55 1655 aa6.38□□□□□ -1.39
SEC24D-214ENST00000514561 JPH4Q96JJ6 628 aa6.38□□□□□ -1.39
SEC24D-214ENST00000514561 CARD11Q9BXL7 1154 aa6.38□□□□□ -1.39
SEC24D-214ENST00000514561 FYCO1Q9BQS8 1478 aa6.38□□□□□ -1.39
SEC24D-214ENST00000514561 GAPVD1Q14C86 1478 aa6.37□□□□□ -1.39
SEC24D-214ENST00000514561 MPHOSPH9Q99550 1183 aa6.37□□□□□ -1.39
SEC24D-214ENST00000514561 POLR1AO95602 1720 aaPredicted RBP6.37□□□□□ -1.39
SEC24D-214ENST00000514561 CEP170Q5SW79 1584 aa6.37□□□□□ -1.39
SEC24D-214ENST00000514561 ZNF644Q9H582 1327 aaPredicted RBP6.37□□□□□ -1.39
SEC24D-214ENST00000514561 PAK3O75914 559 aaPredicted RBP6.37□□□□□ -1.39
SEC24D-214ENST00000514561 HSPA5P11021 654 aaKnown RBP6.37□□□□□ -1.39
SEC24D-214ENST00000514561 IL27Q8NEV9 243 aa6.37□□□□□ -1.39
SEC24D-214ENST00000514561 DCAF11Q8TEB1 546 aa6.37□□□□□ -1.39
SEC24D-214ENST00000514561 HNRNPMP52272 730 aaKnown RBP eCLIP6.36□□□□□ -1.39
SEC24D-214ENST00000514561 ZNF692Q9BU19 519 aaPredicted RBP6.36□□□□□ -1.39
SEC24D-214ENST00000514561 KIAA0586Q9BVV6 1533 aa6.36□□□□□ -1.39
SEC24D-214ENST00000514561 L3MBTL2Q969R5 705 aa6.36□□□□□ -1.39
SEC24D-214ENST00000514561 STAG3Q9UJ98 1225 aa6.35□□□□□ -1.39
SEC24D-214ENST00000514561 MAST1Q9Y2H9 1570 aa6.34□□□□□ -1.39
SEC24D-214ENST00000514561 CCDC136Q96JN2 1154 aa6.34□□□□□ -1.39
SEC24D-214ENST00000514561 HECW1Q76N89 1606 aa6.34□□□□□ -1.39
SEC24D-214ENST00000514561 SLC4A2P04920 1241 aa6.34□□□□□ -1.39
SEC24D-214ENST00000514561 PAXIP1Q6ZW49 1069 aaPredicted RBP6.34□□□□□ -1.39
SEC24D-214ENST00000514561 GRIN2AQ12879 1464 aa6.33□□□□□ -1.4
SEC24D-214ENST00000514561 NEURL4Q96JN8 1562 aa6.33□□□□□ -1.4
SEC24D-214ENST00000514561 TIAM1Q13009 1591 aa6.33□□□□□ -1.4
SEC24D-214ENST00000514561 NOP58Q9Y2X3 529 aaKnown RBP6.33□□□□□ -1.4
SEC24D-214ENST00000514561 NUP155O75694 1391 aa6.33□□□□□ -1.4
SEC24D-214ENST00000514561 GCC2Q8IWJ2 1684 aa6.33□□□□□ -1.4
SEC24D-214ENST00000514561 ITSN2Q9NZM3 1697 aa6.33□□□□□ -1.4
SEC24D-214ENST00000514561 LRRC9Q6ZRR7 1453 aa6.32□□□□□ -1.4
SEC24D-214ENST00000514561 CARMIL2Q6F5E8 1435 aa6.32□□□□□ -1.4
SEC24D-214ENST00000514561 CANXP27824 592 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms