RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 ARAP3Q8WWN8 1544 aa19.31■□□□□ 0.68
CAST-221ENST00000508197 KIF21BO75037 1637 aa19.31■□□□□ 0.68
CAST-221ENST00000508197 RAPGEF3O95398 923 aa19.29■□□□□ 0.68
CAST-221ENST00000508197 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
CAST-221ENST00000508197 ZNF692Q9BU19 519 aaPredicted RBP19.28■□□□□ 0.68
CAST-221ENST00000508197 ATP10BO94823 1461 aa19.28■□□□□ 0.68
CAST-221ENST00000508197 PTPRMP28827 1452 aa19.28■□□□□ 0.68
CAST-221ENST00000508197 P3H3Q8IVL6 736 aa19.27■□□□□ 0.68
CAST-221ENST00000508197 PRXQ9BXM0 1461 aa19.22■□□□□ 0.67
CAST-221ENST00000508197 ADAMTSL3P82987 1691 aa19.22■□□□□ 0.67
CAST-221ENST00000508197 PHLDB1Q86UU1 1377 aa19.2■□□□□ 0.66
CAST-221ENST00000508197 REM2Q8IYK8 340 aaPredicted RBP19.2■□□□□ 0.66
CAST-221ENST00000508197 CTTNBP2Q8WZ74 1663 aa19.2■□□□□ 0.66
CAST-221ENST00000508197 SSUH2Q9Y2M2 353 aa19.18■□□□□ 0.66
CAST-221ENST00000508197 ARID4BQ4LE39 1312 aaPredicted RBP19.16■□□□□ 0.66
CAST-221ENST00000508197 LMTK3Q96Q04 1460 aa19.15■□□□□ 0.66
CAST-221ENST00000508197 ABCA9Q8IUA7 1624 aa19.14■□□□□ 0.66
CAST-221ENST00000508197 HSPA2P54652 639 aa19.13■□□□□ 0.65
CAST-221ENST00000508197 NEO1Q92859 1461 aa19.13■□□□□ 0.65
CAST-221ENST00000508197 FAM9AQ8IZU1 332 aaPredicted RBP19.11■□□□□ 0.65
CAST-221ENST00000508197 PCF11O94913 1555 aaKnown RBP19.1■□□□□ 0.65
CAST-221ENST00000508197 FRMPD1Q5SYB0 1578 aa19.1■□□□□ 0.65
CAST-221ENST00000508197 BCORL1Q5H9F3 1711 aa19.09■□□□□ 0.65
CAST-221ENST00000508197 MADDQ8WXG6 1647 aa19.09■□□□□ 0.65
CAST-221ENST00000508197 CHRDL2Q6WN34 429 aa19.07■□□□□ 0.64
CAST-221ENST00000508197 NUP153P49790 1475 aaKnown RBP19.03■□□□□ 0.64
CAST-221ENST00000508197 SPDYE4A6NLX3 237 aa19.03■□□□□ 0.64
CAST-221ENST00000508197 PLEKHD1A6NEE1 506 aa19.01■□□□□ 0.63
CAST-221ENST00000508197 CERKQ8TCT0 537 aa19.01■□□□□ 0.63
CAST-221ENST00000508197 DENND4BO75064 1496 aaPredicted RBP19.01■□□□□ 0.63
CAST-221ENST00000508197 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
CAST-221ENST00000508197 AKNAQ7Z591 1439 aa19■□□□□ 0.63
CAST-221ENST00000508197 RAPGEF6Q8TEU7 1601 aa19■□□□□ 0.63
CAST-221ENST00000508197 SAMD9Q5K651 1589 aa19■□□□□ 0.63
CAST-221ENST00000508197 PITPNM1O00562 1244 aa18.99■□□□□ 0.63
CAST-221ENST00000508197 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
CAST-221ENST00000508197 YEATS2Q9ULM3 1422 aa18.99■□□□□ 0.63
CAST-221ENST00000508197 RIMS1Q86UR5 1692 aaKnown RBP18.98■□□□□ 0.63
CAST-221ENST00000508197 MLECQ14165 292 aa18.97■□□□□ 0.63
CAST-221ENST00000508197 ARHGEF40Q8TER5 1519 aa18.96■□□□□ 0.63
CAST-221ENST00000508197 FANCAO15360 1455 aa18.95■□□□□ 0.62
CAST-221ENST00000508197 RICTORQ6R327 1708 aa18.94■□□□□ 0.62
CAST-221ENST00000508197 SIGLEC1Q9BZZ2 1709 aa18.94■□□□□ 0.62
CAST-221ENST00000508197 SPDYE1Q8NFV5 336 aaPredicted RBP18.94■□□□□ 0.62
CAST-221ENST00000508197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.92■□□□□ 0.62
CAST-221ENST00000508197 POTEHQ6S545 545 aa18.91■□□□□ 0.62
CAST-221ENST00000508197 ILDR2Q71H61 639 aa18.91■□□□□ 0.62
CAST-221ENST00000508197 POGZQ7Z3K3 1410 aa18.91■□□□□ 0.62
CAST-221ENST00000508197 CEBPAP49715 358 aaPredicted RBP18.9■□□□□ 0.62
CAST-221ENST00000508197 CLEC11AQ9Y240 323 aa18.88■□□□□ 0.61
CAST-221ENST00000508197 ZMYM4Q5VZL5 1548 aa18.88■□□□□ 0.61
CAST-221ENST00000508197 ZFYVE16Q7Z3T8 1539 aa18.87■□□□□ 0.61
CAST-221ENST00000508197 MAGI2Q86UL8 1455 aa18.86■□□□□ 0.61
CAST-221ENST00000508197 SCAPERQ9BY12 1400 aa18.86■□□□□ 0.61
CAST-221ENST00000508197 HECW1Q76N89 1606 aa18.85■□□□□ 0.61
CAST-221ENST00000508197 TTC37Q6PGP7 1564 aa18.85■□□□□ 0.61
CAST-221ENST00000508197 PLCH2O75038 1416 aa18.83■□□□□ 0.61
CAST-221ENST00000508197 EFCAB5A4FU69 1503 aa18.83■□□□□ 0.6
CAST-221ENST00000508197 ATP10AO60312 1499 aa18.81■□□□□ 0.6
CAST-221ENST00000508197 DISP3Q9P2K9 1392 aa18.8■□□□□ 0.6
CAST-221ENST00000508197 ARHGEF12Q9NZN5 1544 aa18.79■□□□□ 0.6
CAST-221ENST00000508197 CDK13Q14004 1512 aaKnown RBP18.79■□□□□ 0.6
CAST-221ENST00000508197 CFAP74Q9C0B2 1584 aa18.78■□□□□ 0.6
CAST-221ENST00000508197 SOCS7O14512 581 aa18.77■□□□□ 0.6
CAST-221ENST00000508197 EFCAB2Q5VUJ9 269 aa18.77■□□□□ 0.6
CAST-221ENST00000508197 AFAP1Q8N556 730 aa18.77■□□□□ 0.6
CAST-221ENST00000508197 FER1L4A9Z1Z3 1794 aa18.76■□□□□ 0.59
CAST-221ENST00000508197 C9orf84Q5VXU9 1444 aa18.74■□□□□ 0.59
CAST-221ENST00000508197 STRCQ7RTU9 1775 aa18.73■□□□□ 0.59
CAST-221ENST00000508197 PIP4P2Q8N4L2 257 aa18.72■□□□□ 0.59
CAST-221ENST00000508197 FXR2P51116 673 aaKnown RBP eCLIP18.71■□□□□ 0.595e-6■□□□□ 9.5
CAST-221ENST00000508197 ATP1B4Q9UN42 357 aaPredicted RBP18.71■□□□□ 0.59
CAST-221ENST00000508197 EEA1Q15075 1411 aa18.69■□□□□ 0.58
CAST-221ENST00000508197 PREX1Q8TCU6 1659 aa18.68■□□□□ 0.58
CAST-221ENST00000508197 UHRF1BP1Q6BDS2 1440 aa18.67■□□□□ 0.58
CAST-221ENST00000508197 FKBP8Q14318 412 aa18.67■□□□□ 0.58
CAST-221ENST00000508197 PRR29P0C7W0 189 aa18.66■□□□□ 0.58
CAST-221ENST00000508197 PTPRTO14522 1441 aa18.65■□□□□ 0.58
CAST-221ENST00000508197 STAG3Q9UJ98 1225 aa18.64■□□□□ 0.57
CAST-221ENST00000508197 MYT1LQ9UL68 1186 aa18.64■□□□□ 0.57
CAST-221ENST00000508197 SETD1BQ9UPS6 1966 aaKnown RBP18.64■□□□□ 0.57
CAST-221ENST00000508197 ZNF518AQ6AHZ1 1483 aa18.64■□□□□ 0.57
CAST-221ENST00000508197 CDK11AQ9UQ88 783 aaPredicted RBP18.63■□□□□ 0.57
CAST-221ENST00000508197 KDM5CP41229 1560 aa18.62■□□□□ 0.57
CAST-221ENST00000508197 KIF14Q15058 1648 aa18.62■□□□□ 0.57
CAST-221ENST00000508197 LTBP4Q8N2S1 1624 aa18.61■□□□□ 0.57
CAST-221ENST00000508197 PROM2Q8N271 834 aa18.61■□□□□ 0.57
CAST-221ENST00000508197 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
CAST-221ENST00000508197 TROQ12816 1431 aaPredicted RBP18.59■□□□□ 0.57
CAST-221ENST00000508197 TRAPPC8Q9Y2L5 1435 aa18.59■□□□□ 0.57
CAST-221ENST00000508197 ARHGAP35Q9NRY4 1499 aa18.58■□□□□ 0.57
CAST-221ENST00000508197 MLH3Q9UHC1 1453 aa18.58■□□□□ 0.57
CAST-221ENST00000508197 FMN1Q68DA7 1419 aa18.58■□□□□ 0.57
CAST-221ENST00000508197 MYO5CQ9NQX4 1742 aa18.58■□□□□ 0.57
CAST-221ENST00000508197 UBTFP17480 764 aaKnown RBP18.58■□□□□ 0.56
CAST-221ENST00000508197 ARHGAP5Q13017 1502 aa18.58■□□□□ 0.56
CAST-221ENST00000508197 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
CAST-221ENST00000508197 C3P01024 1663 aa18.55■□□□□ 0.56
CAST-221ENST00000508197 AGLP35573 1532 aa18.54■□□□□ 0.56
CAST-221ENST00000508197 ESF1Q9H501 851 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 532.2 ms