RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ATN1P54259 1190 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P16-201ENST00000508037 SLC39A7Q92504 469 aa7.08□□□□□ -1.28
HMGB3P16-201ENST00000508037 HMGXB3Q12766 1538 aa7.07□□□□□ -1.28
HMGB3P16-201ENST00000508037 TTLL13PA6NNM8 815 aa7.07□□□□□ -1.28
HMGB3P16-201ENST00000508037 C7P10643 843 aa7.07□□□□□ -1.28
HMGB3P16-201ENST00000508037 TMEM106CQ9BVX2 250 aa7.07□□□□□ -1.28
HMGB3P16-201ENST00000508037 LHX8Q68G74 356 aa7.05□□□□□ -1.28
HMGB3P16-201ENST00000508037 METRNQ9UJH8 293 aa7.05□□□□□ -1.28
HMGB3P16-201ENST00000508037 NEFLP07196 543 aa7.04□□□□□ -1.28
HMGB3P16-201ENST00000508037 TRIM35Q9UPQ4 493 aa7.04□□□□□ -1.28
HMGB3P16-201ENST00000508037 NCAPD3P42695 1498 aa7.04□□□□□ -1.28
HMGB3P16-201ENST00000508037 SETD5Q9C0A6 1442 aa7.03□□□□□ -1.28
HMGB3P16-201ENST00000508037 RANGAP1P46060 587 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P16-201ENST00000508037 KANK4Q5T7N3 995 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P16-201ENST00000508037 ARHGAP35Q9NRY4 1499 aa7.03□□□□□ -1.28
HMGB3P16-201ENST00000508037 FHAD1B1AJZ9 1412 aa7.02□□□□□ -1.29
HMGB3P16-201ENST00000508037 PSEN1P49768 467 aa7.02□□□□□ -1.29
HMGB3P16-201ENST00000508037 PDAP1Q13442 181 aaKnown RBP7.02□□□□□ -1.29
HMGB3P16-201ENST00000508037 ANP32EQ9BTT0 268 aa7.02□□□□□ -1.29
HMGB3P16-201ENST00000508037 CUX1P39880 1505 aa7.01□□□□□ -1.29
HMGB3P16-201ENST00000508037 TIAM1Q13009 1591 aa7.01□□□□□ -1.29
HMGB3P16-201ENST00000508037 CFTRP13569 1480 aa7.01□□□□□ -1.29
HMGB3P16-201ENST00000508037 RAB3GAP2Q9H2M9 1393 aa7.01□□□□□ -1.29
HMGB3P16-201ENST00000508037 CCER2I3L3R5 266 aa7.01□□□□□ -1.29
HMGB3P16-201ENST00000508037 SEC24BO95487 1268 aa7.01□□□□□ -1.29
HMGB3P16-201ENST00000508037 GOLGA2Q08379 1002 aa7.01□□□□□ -1.29
HMGB3P16-201ENST00000508037 IER5LQ5T953 404 aa7.01□□□□□ -1.29
HMGB3P16-201ENST00000508037 TSHZ2Q9NRE2 1034 aa7.01□□□□□ -1.29
HMGB3P16-201ENST00000508037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7□□□□□ -1.29
HMGB3P16-201ENST00000508037 ECM2O94769 699 aaPredicted RBP7□□□□□ -1.29
HMGB3P16-201ENST00000508037 RIOK3O14730 519 aaKnown RBP6.99□□□□□ -1.29
HMGB3P16-201ENST00000508037 LRRC9Q6ZRR7 1453 aa6.98□□□□□ -1.29
HMGB3P16-201ENST00000508037 MAPKBP1O60336 1514 aa6.98□□□□□ -1.29
HMGB3P16-201ENST00000508037 TAOK2Q9UL54 1235 aa6.98□□□□□ -1.29
HMGB3P16-201ENST00000508037 ANP32CO43423 234 aa6.97□□□□□ -1.29
HMGB3P16-201ENST00000508037 PRDM2Q13029 1718 aa6.97□□□□□ -1.29
HMGB3P16-201ENST00000508037 MKRN3Q13064 507 aaKnown RBP6.97□□□□□ -1.29
HMGB3P16-201ENST00000508037 PKD2Q13563 968 aa6.97□□□□□ -1.29
HMGB3P16-201ENST00000508037 VGFO15240 615 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P16-201ENST00000508037 PLCG2P16885 1265 aa6.96□□□□□ -1.3
HMGB3P16-201ENST00000508037 CFAP43Q8NDM7 1665 aa6.96□□□□□ -1.3
HMGB3P16-201ENST00000508037 IGF1RP08069 1367 aa6.95□□□□□ -1.3
HMGB3P16-201ENST00000508037 ITGAEP38570 1179 aa6.95□□□□□ -1.3
HMGB3P16-201ENST00000508037 RNF25Q96BH1 459 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P16-201ENST00000508037 AQRO60306 1485 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGB3P16-201ENST00000508037 EFCAB5A4FU69 1503 aa6.95□□□□□ -1.3
HMGB3P16-201ENST00000508037 CARMIL1Q5VZK9 1371 aa6.95□□□□□ -1.3
HMGB3P16-201ENST00000508037 FYCO1Q9BQS8 1478 aa6.94□□□□□ -1.3
HMGB3P16-201ENST00000508037 POTEB2H3BUK9 544 aa6.94□□□□□ -1.3
HMGB3P16-201ENST00000508037 PPP1R15AO75807 674 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P16-201ENST00000508037 CABP2Q9NPB3 220 aa6.94□□□□□ -1.3
HMGB3P16-201ENST00000508037 COLQQ9Y215 455 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P16-201ENST00000508037 POTEFA5A3E0 1075 aa6.93□□□□□ -1.3
HMGB3P16-201ENST00000508037 DDX10Q13206 875 aaKnown RBP6.93□□□□□ -1.3
HMGB3P16-201ENST00000508037 FAM50AQ14320 339 aaKnown RBP6.93□□□□□ -1.3
HMGB3P16-201ENST00000508037 ERICH6BQ5W0A0 696 aa6.93□□□□□ -1.3
HMGB3P16-201ENST00000508037 MAMSTRQ6ZN01 415 aa6.93□□□□□ -1.3
HMGB3P16-201ENST00000508037 OCEL1Q9H607 264 aa6.93□□□□□ -1.3
HMGB3P16-201ENST00000508037 WDR97A6NE52 1622 aa6.92□□□□□ -1.3
HMGB3P16-201ENST00000508037 IRX5P78411 483 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P16-201ENST00000508037 PHLDB1Q86UU1 1377 aa6.92□□□□□ -1.3
HMGB3P16-201ENST00000508037 TONSLQ96HA7 1378 aa6.92□□□□□ -1.3
HMGB3P16-201ENST00000508037 CASKIN1Q8WXD9 1431 aa6.92□□□□□ -1.3
HMGB3P16-201ENST00000508037 FGD5Q6ZNL6 1462 aa6.92□□□□□ -1.3
HMGB3P16-201ENST00000508037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P16-201ENST00000508037 ZFP91Q96JP5 570 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P16-201ENST00000508037 MYT1LQ9UL68 1186 aa6.91□□□□□ -1.3
HMGB3P16-201ENST00000508037 FMN1Q68DA7 1419 aa6.91□□□□□ -1.3
HMGB3P16-201ENST00000508037 RGL2O15211 777 aa6.9□□□□□ -1.3
HMGB3P16-201ENST00000508037 SCUBE2Q9NQ36 999 aa6.9□□□□□ -1.3
HMGB3P16-201ENST00000508037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGB3P16-201ENST00000508037 CADPSQ9ULU8 1353 aa6.9□□□□□ -1.31
HMGB3P16-201ENST00000508037 UACAQ9BZF9 1416 aa6.89□□□□□ -1.31
HMGB3P16-201ENST00000508037 PCF11O94913 1555 aaKnown RBP6.89□□□□□ -1.31
HMGB3P16-201ENST00000508037 CUL7Q14999 1698 aa6.88□□□□□ -1.31
HMGB3P16-201ENST00000508037 CC2D2AQ9P2K1 1620 aa6.88□□□□□ -1.31
HMGB3P16-201ENST00000508037 HFM1A2PYH4 1435 aa6.88□□□□□ -1.31
HMGB3P16-201ENST00000508037 OTUD5Q96G74 571 aa6.88□□□□□ -1.31
HMGB3P16-201ENST00000508037 CDK11AQ9UQ88 783 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P16-201ENST00000508037 FGD6Q6ZV73 1430 aa6.87□□□□□ -1.31
HMGB3P16-201ENST00000508037 FANCIQ9NVI1 1328 aa6.87□□□□□ -1.31
HMGB3P16-201ENST00000508037 STK25O00506 426 aa6.87□□□□□ -1.31
HMGB3P16-201ENST00000508037 POTEJP0CG39 1038 aa6.87□□□□□ -1.31
HMGB3P16-201ENST00000508037 EFCAB3Q8N7B9 438 aa6.87□□□□□ -1.31
HMGB3P16-201ENST00000508037 BCANQ96GW7 911 aa6.87□□□□□ -1.31
HMGB3P16-201ENST00000508037 SIN3AQ96ST3 1273 aa6.87□□□□□ -1.31
HMGB3P16-201ENST00000508037 RBM19Q9Y4C8 960 aaKnown RBP6.87□□□□□ -1.31
HMGB3P16-201ENST00000508037 STK24Q9Y6E0 443 aa6.87□□□□□ -1.31
HMGB3P16-201ENST00000508037 THOC2Q8NI27 1593 aaKnown RBP6.86□□□□□ -1.31
HMGB3P16-201ENST00000508037 CCDC18Q5T9S5 1454 aa6.86□□□□□ -1.31
HMGB3P16-201ENST00000508037 L3MBTL3Q96JM7 780 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P16-201ENST00000508037 KCNH8Q96L42 1107 aa6.86□□□□□ -1.31
HMGB3P16-201ENST00000508037 BCL11BQ9C0K0 894 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P16-201ENST00000508037 ABCA10Q8WWZ4 1543 aa6.86□□□□□ -1.31
HMGB3P16-201ENST00000508037 MTUS2Q5JR59 1369 aa6.85□□□□□ -1.31
HMGB3P16-201ENST00000508037 SOX12O15370 315 aa6.85□□□□□ -1.31
HMGB3P16-201ENST00000508037 ERICH6Q7L0X2 663 aa6.85□□□□□ -1.31
HMGB3P16-201ENST00000508037 PDCD7Q8N8D1 485 aaKnown RBP6.85□□□□□ -1.31
HMGB3P16-201ENST00000508037 DNMBPQ6XZF7 1577 aa6.84□□□□□ -1.31
HMGB3P16-201ENST00000508037 ATP1B4Q9UN42 357 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms