RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 WDR7Q9Y4E6 1490 aa15.46■□□□□ 0.07
RPS3A-206ENST00000507485 SSUH2Q9Y2M2 353 aa15.45■□□□□ 0.06
RPS3A-206ENST00000507485 MKRN4PQ13434 485 aaPredicted RBP15.44■□□□□ 0.06
RPS3A-206ENST00000507485 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
RPS3A-206ENST00000507485 GOLGA3Q08378 1498 aa15.43■□□□□ 0.06
RPS3A-206ENST00000507485 ADGRL1O94910 1474 aa15.42■□□□□ 0.06
RPS3A-206ENST00000507485 TEX14Q8IWB6 1497 aa15.41■□□□□ 0.06
RPS3A-206ENST00000507485 C19orf67A6NJJ6 358 aa15.39■□□□□ 0.05
RPS3A-206ENST00000507485 CFAP43Q8NDM7 1665 aa15.38■□□□□ 0.05
RPS3A-206ENST00000507485 P3H3Q8IVL6 736 aa15.38■□□□□ 0.05
RPS3A-206ENST00000507485 MAGI3Q5TCQ9 1506 aa15.37■□□□□ 0.05
RPS3A-206ENST00000507485 KCNH8Q96L42 1107 aa15.37■□□□□ 0.05
RPS3A-206ENST00000507485 CD109Q6YHK3 1445 aa15.37■□□□□ 0.05
RPS3A-206ENST00000507485 ARID3CA6NKF2 412 aa15.36■□□□□ 0.05
RPS3A-206ENST00000507485 SAMD9Q5K651 1589 aa15.35■□□□□ 0.05
RPS3A-206ENST00000507485 ATP10BO94823 1461 aa15.34■□□□□ 0.05
RPS3A-206ENST00000507485 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
RPS3A-206ENST00000507485 RAPGEF6Q8TEU7 1601 aa15.28■□□□□ 0.04
RPS3A-206ENST00000507485 ABCA9Q8IUA7 1624 aa15.27■□□□□ 0.04
RPS3A-206ENST00000507485 KIF21BO75037 1637 aa15.26■□□□□ 0.03
RPS3A-206ENST00000507485 ARAP3Q8WWN8 1544 aa15.25■□□□□ 0.03
RPS3A-206ENST00000507485 NUP153P49790 1475 aaKnown RBP15.25■□□□□ 0.03
RPS3A-206ENST00000507485 FHOD3Q2V2M9 1422 aa15.25■□□□□ 0.03
RPS3A-206ENST00000507485 HECW2Q9P2P5 1572 aa15.24■□□□□ 0.03
RPS3A-206ENST00000507485 GABBR2O75899 941 aa15.23■□□□□ 0.03
RPS3A-206ENST00000507485 RANGAP1P46060 587 aaPredicted RBP15.22■□□□□ 0.03
RPS3A-206ENST00000507485 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
RPS3A-206ENST00000507485 FAM9AQ8IZU1 332 aaPredicted RBP15.21■□□□□ 0.03
RPS3A-206ENST00000507485 FRMPD1Q5SYB0 1578 aa15.2■□□□□ 0.02
RPS3A-206ENST00000507485 EEA1Q15075 1411 aa15.2■□□□□ 0.02
RPS3A-206ENST00000507485 RAPGEF3O95398 923 aa15.18■□□□□ 0.02
RPS3A-206ENST00000507485 CHADLQ6NUI6 762 aa15.18■□□□□ 0.02
RPS3A-206ENST00000507485 NEO1Q92859 1461 aa15.16■□□□□ 0.02
RPS3A-206ENST00000507485 ILDR1Q86SU0 546 aaPredicted RBP15.15■□□□□ 0.02
RPS3A-206ENST00000507485 ADAMTSL3P82987 1691 aa15.14■□□□□ 0.01
RPS3A-206ENST00000507485 PHLDB1Q86UU1 1377 aa15.13■□□□□ 0.01
RPS3A-206ENST00000507485 TTC37Q6PGP7 1564 aa15.12■□□□□ 0.01
RPS3A-206ENST00000507485 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.12■□□□□ 0.012e-8■□□□□ 10.7
RPS3A-206ENST00000507485 EFCAB5A4FU69 1503 aa15.11■□□□□ 0.01
RPS3A-206ENST00000507485 CDK13Q14004 1512 aaKnown RBP15.11■□□□□ 0.01
RPS3A-206ENST00000507485 RICTORQ6R327 1708 aa15.1■□□□□ 0.01
RPS3A-206ENST00000507485 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
RPS3A-206ENST00000507485 BCORL1Q5H9F3 1711 aa15.08■□□□□ 0.01
RPS3A-206ENST00000507485 PTPRMP28827 1452 aa15.08■□□□□ 0.01
RPS3A-206ENST00000507485 LHX8Q68G74 356 aa15.08■□□□□ 0.01
RPS3A-206ENST00000507485 SIGLEC1Q9BZZ2 1709 aa15.08■□□□□ 0
RPS3A-206ENST00000507485 PLEKHD1A6NEE1 506 aa15.07■□□□□ 0
RPS3A-206ENST00000507485 AKNAQ7Z591 1439 aa15.07■□□□□ 0
RPS3A-206ENST00000507485 MADDQ8WXG6 1647 aa15.07■□□□□ 0
RPS3A-206ENST00000507485 ARHGEF40Q8TER5 1519 aa15.06■□□□□ 0
RPS3A-206ENST00000507485 FANCAO15360 1455 aa15.06■□□□□ 0
RPS3A-206ENST00000507485 DENND4BO75064 1496 aaPredicted RBP15.05■□□□□ 0
RPS3A-206ENST00000507485 ARHGAP35Q9NRY4 1499 aa15.04■□□□□ -0
RPS3A-206ENST00000507485 YEATS2Q9ULM3 1422 aa15.03■□□□□ -0
RPS3A-206ENST00000507485 CFAP74Q9C0B2 1584 aa15.02□□□□□ -0.01
RPS3A-206ENST00000507485 CLCN6P51797 869 aa15.02□□□□□ -0.01
RPS3A-206ENST00000507485 ZMYM4Q5VZL5 1548 aa15.01□□□□□ -0.01
RPS3A-206ENST00000507485 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
RPS3A-206ENST00000507485 RIMS1Q86UR5 1692 aaKnown RBP15□□□□□ -0.01
RPS3A-206ENST00000507485 ARID4BQ4LE39 1312 aaPredicted RBP15□□□□□ -0.01
RPS3A-206ENST00000507485 FARP1Q9Y4F1 1045 aaPredicted RBP14.99□□□□□ -0.01
RPS3A-206ENST00000507485 KIF14Q15058 1648 aa14.99□□□□□ -0.01
RPS3A-206ENST00000507485 HECW1Q76N89 1606 aa14.99□□□□□ -0.01
RPS3A-206ENST00000507485 PLCH2O75038 1416 aa14.98□□□□□ -0.01
RPS3A-206ENST00000507485 CD44P16070 742 aaKnown RBP14.98□□□□□ -0.01
RPS3A-206ENST00000507485 UBTFP17480 764 aaKnown RBP14.98□□□□□ -0.01
RPS3A-206ENST00000507485 ZFYVE16Q7Z3T8 1539 aa14.98□□□□□ -0.01
RPS3A-206ENST00000507485 LMTK3Q96Q04 1460 aa14.97□□□□□ -0.01
RPS3A-206ENST00000507485 FMN1Q68DA7 1419 aa14.96□□□□□ -0.01
RPS3A-206ENST00000507485 POGZQ7Z3K3 1410 aa14.96□□□□□ -0.01
RPS3A-206ENST00000507485 SCAPERQ9BY12 1400 aa14.96□□□□□ -0.01
RPS3A-206ENST00000507485 PCF11O94913 1555 aaKnown RBP14.96□□□□□ -0.01
RPS3A-206ENST00000507485 ATP1B4Q9UN42 357 aaPredicted RBP14.95□□□□□ -0.02
RPS3A-206ENST00000507485 MYO5CQ9NQX4 1742 aa14.94□□□□□ -0.02
RPS3A-206ENST00000507485 MAGI2Q86UL8 1455 aa14.92□□□□□ -0.02
RPS3A-206ENST00000507485 TROQ12816 1431 aaPredicted RBP14.91□□□□□ -0.02
RPS3A-206ENST00000507485 MLECQ14165 292 aa14.9□□□□□ -0.02
RPS3A-206ENST00000507485 FER1L4A9Z1Z3 1794 aa14.89□□□□□ -0.03
RPS3A-206ENST00000507485 HSPA2P54652 639 aa14.88□□□□□ -0.03
RPS3A-206ENST00000507485 CDC42BPBQ9Y5S2 1711 aa14.88□□□□□ -0.03
RPS3A-206ENST00000507485 ARHGEF12Q9NZN5 1544 aa14.87□□□□□ -0.03
RPS3A-206ENST00000507485 EFCAB2Q5VUJ9 269 aa14.87□□□□□ -0.03
RPS3A-206ENST00000507485 ATP10AO60312 1499 aa14.87□□□□□ -0.03
RPS3A-206ENST00000507485 KDM5CP41229 1560 aa14.87□□□□□ -0.03
RPS3A-206ENST00000507485 POTEIP0CG38 1075 aa14.87□□□□□ -0.03
RPS3A-206ENST00000507485 ARHGAP5Q13017 1502 aa14.86□□□□□ -0.03
RPS3A-206ENST00000507485 AFAP1Q8N556 730 aa14.86□□□□□ -0.03
RPS3A-206ENST00000507485 C9orf84Q5VXU9 1444 aa14.86□□□□□ -0.03
RPS3A-206ENST00000507485 DIP2CQ9Y2E4 1556 aa14.84□□□□□ -0.03
RPS3A-206ENST00000507485 CDK11AQ9UQ88 783 aaPredicted RBP14.84□□□□□ -0.03
RPS3A-206ENST00000507485 ZNF518AQ6AHZ1 1483 aa14.84□□□□□ -0.03
RPS3A-206ENST00000507485 CASKIN1Q8WXD9 1431 aa14.83□□□□□ -0.03
RPS3A-206ENST00000507485 PREX2Q70Z35 1606 aa14.83□□□□□ -0.04
RPS3A-206ENST00000507485 FBXO41Q8TF61 875 aa14.83□□□□□ -0.04
RPS3A-206ENST00000507485 CLIP1P30622 1438 aa14.83□□□□□ -0.04
RPS3A-206ENST00000507485 ABCA6Q8N139 1617 aa14.83□□□□□ -0.04
RPS3A-206ENST00000507485 TRAPPC8Q9Y2L5 1435 aa14.82□□□□□ -0.04
RPS3A-206ENST00000507485 CEBPAP49715 358 aaPredicted RBP14.82□□□□□ -0.04
RPS3A-206ENST00000507485 ABCC1P33527 1531 aa14.8□□□□□ -0.04
RPS3A-206ENST00000507485 ITSN2Q9NZM3 1697 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms