RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 NUP153P49790 1475 aaKnown RBP20.84■□□□□ 0.93
MACF1-223ENST00000496360 KDM6BO15054 1643 aa20.83■□□□□ 0.93
MACF1-223ENST00000496360 DDX10Q13206 875 aaKnown RBP20.83■□□□□ 0.93
MACF1-223ENST00000496360 ARHGAP35Q9NRY4 1499 aa20.82■□□□□ 0.92
MACF1-223ENST00000496360 ITGAEP38570 1179 aa20.8■□□□□ 0.92
MACF1-223ENST00000496360 RAB3GAP2Q9H2M9 1393 aa20.8■□□□□ 0.92
MACF1-223ENST00000496360 TEX14Q8IWB6 1497 aa20.79■□□□□ 0.92
MACF1-223ENST00000496360 DEKP35659 375 aaKnown RBP20.78■□□□□ 0.92
MACF1-223ENST00000496360 CFAP43Q8NDM7 1665 aa20.78■□□□□ 0.92
MACF1-223ENST00000496360 MAP3K1Q13233 1512 aa20.78■□□□□ 0.92
MACF1-223ENST00000496360 CD109Q6YHK3 1445 aa20.77■□□□□ 0.92
MACF1-223ENST00000496360 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.92
MACF1-223ENST00000496360 FMN1Q68DA7 1419 aa20.76■□□□□ 0.91
MACF1-223ENST00000496360 SETD5Q9C0A6 1442 aa20.76■□□□□ 0.91
MACF1-223ENST00000496360 MAGI3Q5TCQ9 1506 aa20.74■□□□□ 0.91
MACF1-223ENST00000496360 TRIM52Q96A61 297 aa20.72■□□□□ 0.91
MACF1-223ENST00000496360 PPP4R2Q9NY27 417 aa20.71■□□□□ 0.91
MACF1-223ENST00000496360 ABCA9Q8IUA7 1624 aa20.7■□□□□ 0.9
MACF1-223ENST00000496360 PLEKHD1A6NEE1 506 aa20.69■□□□□ 0.9
MACF1-223ENST00000496360 COL17A1Q9UMD9 1497 aaPredicted RBP20.69■□□□□ 0.9
MACF1-223ENST00000496360 HECW1Q76N89 1606 aa20.68■□□□□ 0.9
MACF1-223ENST00000496360 CDK13Q14004 1512 aaKnown RBP20.67■□□□□ 0.9
MACF1-223ENST00000496360 ATP1B4Q9UN42 357 aaPredicted RBP20.66■□□□□ 0.9
MACF1-223ENST00000496360 NOP58Q9Y2X3 529 aaKnown RBP20.61■□□□□ 0.89
MACF1-223ENST00000496360 CASKIN1Q8WXD9 1431 aa20.58■□□□□ 0.89
MACF1-223ENST00000496360 PHLDB1Q86UU1 1377 aa20.58■□□□□ 0.89
MACF1-223ENST00000496360 PCF11O94913 1555 aaKnown RBP20.57■□□□□ 0.88
MACF1-223ENST00000496360 TIAM1Q13009 1591 aa20.57■□□□□ 0.88
MACF1-223ENST00000496360 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.57■□□□□ 0.88
MACF1-223ENST00000496360 ARAP3Q8WWN8 1544 aa20.56■□□□□ 0.88
MACF1-223ENST00000496360 NEO1Q92859 1461 aa20.56■□□□□ 0.88
MACF1-223ENST00000496360 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
MACF1-223ENST00000496360 LRRIQ1Q96JM4 1722 aa20.54■□□□□ 0.88
MACF1-223ENST00000496360 TTC37Q6PGP7 1564 aa20.54■□□□□ 0.88
MACF1-223ENST00000496360 HNRNPUQ00839 825 aaKnown RBP eCLIP20.53■□□□□ 0.88
MACF1-223ENST00000496360 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.53■□□□□ 0.88
MACF1-223ENST00000496360 FYCO1Q9BQS8 1478 aa20.52■□□□□ 0.88
MACF1-223ENST00000496360 CCDC18Q5T9S5 1454 aa20.52■□□□□ 0.88
MACF1-223ENST00000496360 TROQ12816 1431 aaPredicted RBP20.51■□□□□ 0.87
MACF1-223ENST00000496360 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
MACF1-223ENST00000496360 FANCAO15360 1455 aa20.48■□□□□ 0.87
MACF1-223ENST00000496360 CFAP74Q9C0B2 1584 aa20.47■□□□□ 0.87
MACF1-223ENST00000496360 KIF14Q15058 1648 aa20.47■□□□□ 0.87
MACF1-223ENST00000496360 LRRC9Q6ZRR7 1453 aa20.47■□□□□ 0.87
MACF1-223ENST00000496360 RTL5Q5HYW3 569 aaPredicted RBP20.46■□□□□ 0.87
MACF1-223ENST00000496360 PLCH2O75038 1416 aa20.46■□□□□ 0.87
MACF1-223ENST00000496360 AKNAQ7Z591 1439 aa20.46■□□□□ 0.87
MACF1-223ENST00000496360 KDM4FA0A1W2PPD8 638 aa20.45■□□□□ 0.86
MACF1-223ENST00000496360 RAPGEF3O95398 923 aa20.44■□□□□ 0.86
MACF1-223ENST00000496360 TONSLQ96HA7 1378 aa20.44■□□□□ 0.86
MACF1-223ENST00000496360 MYO5CQ9NQX4 1742 aa20.42■□□□□ 0.86
MACF1-223ENST00000496360 DENND4BO75064 1496 aaPredicted RBP20.42■□□□□ 0.86
MACF1-223ENST00000496360 FRMPD1Q5SYB0 1578 aa20.41■□□□□ 0.86
MACF1-223ENST00000496360 ANP32AP39687 249 aaKnown RBP20.4■□□□□ 0.86
MACF1-223ENST00000496360 IPO9Q96P70 1041 aaKnown RBP20.39■□□□□ 0.86
MACF1-223ENST00000496360 ADGRL1O94910 1474 aa20.39■□□□□ 0.85
MACF1-223ENST00000496360 ANO8Q9HCE9 1232 aaPredicted RBP20.39■□□□□ 0.85
MACF1-223ENST00000496360 IRX6P78412 446 aaPredicted RBP20.38■□□□□ 0.85
MACF1-223ENST00000496360 EFCAB2Q5VUJ9 269 aa20.38■□□□□ 0.85
MACF1-223ENST00000496360 ZBED9Q6R2W3 1325 aa20.38■□□□□ 0.85
MACF1-223ENST00000496360 RICTORQ6R327 1708 aa20.37■□□□□ 0.85
MACF1-223ENST00000496360 NCOA2Q15596 1464 aa20.36■□□□□ 0.85
MACF1-223ENST00000496360 SCAPERQ9BY12 1400 aa20.35■□□□□ 0.85
MACF1-223ENST00000496360 ARHGAP5Q13017 1502 aa20.34■□□□□ 0.85
MACF1-223ENST00000496360 NBR1Q14596 966 aa20.34■□□□□ 0.85
MACF1-223ENST00000496360 USP35Q9P2H5 1018 aa20.34■□□□□ 0.85
MACF1-223ENST00000496360 ZBTB47Q9UFB7 747 aaPredicted RBP20.32■□□□□ 0.84
MACF1-223ENST00000496360 ZMYM4Q5VZL5 1548 aa20.31■□□□□ 0.84
MACF1-223ENST00000496360 POGZQ7Z3K3 1410 aa20.31■□□□□ 0.84
MACF1-223ENST00000496360 PAK3O75914 559 aaPredicted RBP20.31■□□□□ 0.84
MACF1-223ENST00000496360 PREX2Q70Z35 1606 aa20.31■□□□□ 0.84
MACF1-223ENST00000496360 WASHC2AQ641Q2 1341 aa20.3■□□□□ 0.84
MACF1-223ENST00000496360 HIRIP3Q9BW71 556 aaPredicted RBP20.3■□□□□ 0.84
MACF1-223ENST00000496360 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
MACF1-223ENST00000496360 CNTLNQ9NXG0 1405 aa20.3■□□□□ 0.84
MACF1-223ENST00000496360 MTUS2Q5JR59 1369 aa20.3■□□□□ 0.84
MACF1-223ENST00000496360 ARHGEF40Q8TER5 1519 aa20.29■□□□□ 0.84
MACF1-223ENST00000496360 B4GALNT3Q6L9W6 998 aa20.29■□□□□ 0.84
MACF1-223ENST00000496360 FAM50AQ14320 339 aaKnown RBP20.28■□□□□ 0.84
MACF1-223ENST00000496360 C11orf95C9JLR9 678 aaPredicted RBP20.27■□□□□ 0.84
MACF1-223ENST00000496360 CDC42BPAQ5VT25 1732 aa20.27■□□□□ 0.84
MACF1-223ENST00000496360 MAGI2Q86UL8 1455 aa20.27■□□□□ 0.84
MACF1-223ENST00000496360 ZFYVE16Q7Z3T8 1539 aa20.26■□□□□ 0.83
MACF1-223ENST00000496360 SALL2Q9Y467 1007 aaPredicted RBP20.25■□□□□ 0.83
MACF1-223ENST00000496360 EHBP1L1Q8N3D4 1523 aa20.25■□□□□ 0.83
MACF1-223ENST00000496360 SMG6Q86US8 1419 aaKnown RBP20.24■□□□□ 0.83
MACF1-223ENST00000496360 GPATCH8Q9UKJ3 1502 aaKnown RBP20.24■□□□□ 0.83
MACF1-223ENST00000496360 UBE2Q2Q8WVN8 375 aa20.24■□□□□ 0.83
MACF1-223ENST00000496360 HFM1A2PYH4 1435 aa20.24■□□□□ 0.83
MACF1-223ENST00000496360 YEATS2Q9ULM3 1422 aa20.24■□□□□ 0.83
MACF1-223ENST00000496360 ZNF518AQ6AHZ1 1483 aa20.24■□□□□ 0.83
MACF1-223ENST00000496360 RNF123Q5XPI4 1314 aa20.23■□□□□ 0.83
MACF1-223ENST00000496360 ABCC1P33527 1531 aa20.22■□□□□ 0.83
MACF1-223ENST00000496360 ARID4BQ4LE39 1312 aaPredicted RBP20.21■□□□□ 0.83
MACF1-223ENST00000496360 AFAP1Q8N556 730 aa20.2■□□□□ 0.82
MACF1-223ENST00000496360 KDM5CP41229 1560 aa20.2■□□□□ 0.82
MACF1-223ENST00000496360 ARHGEF12Q9NZN5 1544 aa20.19■□□□□ 0.82
MACF1-223ENST00000496360 WASHC2CQ9Y4E1 1318 aa20.18■□□□□ 0.82
MACF1-223ENST00000496360 ZNF777Q9ULD5 760 aaPredicted RBP20.18■□□□□ 0.82
MACF1-223ENST00000496360 ITSN2Q9NZM3 1697 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms