RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 MYO5CQ9NQX4 1742 aa17.76■□□□□ 0.43
LSM2-214ENST00000493387 MIA2Q96PC5 1412 aa17.75■□□□□ 0.43
LSM2-214ENST00000493387 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
LSM2-214ENST00000493387 ARHGAP5Q13017 1502 aa17.74■□□□□ 0.43
LSM2-214ENST00000493387 PREX2Q70Z35 1606 aa17.73■□□□□ 0.43
LSM2-214ENST00000493387 FANCAO15360 1455 aa17.73■□□□□ 0.43
LSM2-214ENST00000493387 NEO1Q92859 1461 aa17.73■□□□□ 0.43
LSM2-214ENST00000493387 CDC42BPAQ5VT25 1732 aa17.72■□□□□ 0.43
LSM2-214ENST00000493387 CFAP74Q9C0B2 1584 aa17.71■□□□□ 0.43
LSM2-214ENST00000493387 ZNF777Q9ULD5 760 aaPredicted RBP17.7■□□□□ 0.42
LSM2-214ENST00000493387 FGD6Q6ZV73 1430 aa17.7■□□□□ 0.42
LSM2-214ENST00000493387 CDC42BPBQ9Y5S2 1711 aa17.69■□□□□ 0.42
LSM2-214ENST00000493387 PLEKHH2Q8IVE3 1493 aa17.69■□□□□ 0.42
LSM2-214ENST00000493387 TSPOAP1O95153 1857 aa17.69■□□□□ 0.42
LSM2-214ENST00000493387 AKNAQ7Z591 1439 aa17.69■□□□□ 0.42
LSM2-214ENST00000493387 PPRC1Q5VV67 1664 aaKnown RBP17.67■□□□□ 0.42
LSM2-214ENST00000493387 KIAA1107Q9UPP5 1409 aa17.67■□□□□ 0.42
LSM2-214ENST00000493387 RSPH4AQ5TD94 716 aa17.66■□□□□ 0.42
LSM2-214ENST00000493387 ADGRL1O94910 1474 aa17.64■□□□□ 0.41
LSM2-214ENST00000493387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.64■□□□□ 0.41
LSM2-214ENST00000493387 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.41
LSM2-214ENST00000493387 TCOF1Q13428 1488 aaKnown RBP17.63■□□□□ 0.41
LSM2-214ENST00000493387 ZNF644Q9H582 1327 aaPredicted RBP17.63■□□□□ 0.41
LSM2-214ENST00000493387 SCAPERQ9BY12 1400 aa17.63■□□□□ 0.41
LSM2-214ENST00000493387 CAMSAP2Q08AD1 1489 aa17.63■□□□□ 0.41
LSM2-214ENST00000493387 PTPN23Q9H3S7 1636 aa17.62■□□□□ 0.41
LSM2-214ENST00000493387 FAM50AQ14320 339 aaKnown RBP17.62■□□□□ 0.41
LSM2-214ENST00000493387 SAMD9LQ8IVG5 1584 aa17.62■□□□□ 0.41
LSM2-214ENST00000493387 DENND4BO75064 1496 aaPredicted RBP17.61■□□□□ 0.41
LSM2-214ENST00000493387 HNRNPMP52272 730 aaKnown RBP eCLIP17.6■□□□□ 0.41
LSM2-214ENST00000493387 ABCC1P33527 1531 aa17.6■□□□□ 0.41
LSM2-214ENST00000493387 MBD5Q9P267 1494 aa17.57■□□□□ 0.4
LSM2-214ENST00000493387 SYCP2Q9BX26 1530 aa17.57■□□□□ 0.4
LSM2-214ENST00000493387 TSPY4P0CV99 314 aa17.56■□□□□ 0.4
LSM2-214ENST00000493387 TSPY10P0CW01 314 aa17.56■□□□□ 0.4
LSM2-214ENST00000493387 ARHGEF12Q9NZN5 1544 aa17.56■□□□□ 0.4
LSM2-214ENST00000493387 ZNF518AQ6AHZ1 1483 aa17.56■□□□□ 0.4
LSM2-214ENST00000493387 POGZQ7Z3K3 1410 aa17.55■□□□□ 0.4
LSM2-214ENST00000493387 ARHGEF5Q12774 1597 aa17.55■□□□□ 0.4
LSM2-214ENST00000493387 TRAPPC8Q9Y2L5 1435 aa17.55■□□□□ 0.4
LSM2-214ENST00000493387 RAPGEF3O95398 923 aa17.54■□□□□ 0.4
LSM2-214ENST00000493387 AFAP1Q8N556 730 aa17.54■□□□□ 0.4
LSM2-214ENST00000493387 CCDC141Q6ZP82 1450 aa17.54■□□□□ 0.4
LSM2-214ENST00000493387 COL17A1Q9UMD9 1497 aaPredicted RBP17.52■□□□□ 0.4
LSM2-214ENST00000493387 KDM6BO15054 1643 aa17.52■□□□□ 0.4
LSM2-214ENST00000493387 SPAG9O60271 1321 aaKnown RBP17.51■□□□□ 0.39
LSM2-214ENST00000493387 ABCC5O15440 1437 aa17.51■□□□□ 0.39
LSM2-214ENST00000493387 DAPK1P53355 1430 aa17.51■□□□□ 0.39
LSM2-214ENST00000493387 RTEL1-TNFRSF6BF6WH68 1400 aa17.49■□□□□ 0.39
LSM2-214ENST00000493387 TRIM26Q12899 539 aaPredicted RBP17.49■□□□□ 0.39
LSM2-214ENST00000493387 MYT1LQ9UL68 1186 aa17.49■□□□□ 0.39
LSM2-214ENST00000493387 DNMT1P26358 1616 aaKnown RBP17.49■□□□□ 0.39
LSM2-214ENST00000493387 MAGI2Q86UL8 1455 aa17.49■□□□□ 0.39
LSM2-214ENST00000493387 SHANK2Q9UPX8 1470 aa17.49■□□□□ 0.39
LSM2-214ENST00000493387 KDM5CP41229 1560 aa17.49■□□□□ 0.39
LSM2-214ENST00000493387 RICTORQ6R327 1708 aa17.48■□□□□ 0.39
LSM2-214ENST00000493387 MLH3Q9UHC1 1453 aa17.48■□□□□ 0.39
LSM2-214ENST00000493387 ZMYM4Q5VZL5 1548 aa17.47■□□□□ 0.39
LSM2-214ENST00000493387 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
LSM2-214ENST00000493387 ITGAEP38570 1179 aa17.46■□□□□ 0.39
LSM2-214ENST00000493387 FRMPD1Q5SYB0 1578 aa17.45■□□□□ 0.38
LSM2-214ENST00000493387 MAST1Q9Y2H9 1570 aa17.45■□□□□ 0.38
LSM2-214ENST00000493387 ANKRD30AQ9BXX3 1397 aa17.44■□□□□ 0.38
LSM2-214ENST00000493387 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
LSM2-214ENST00000493387 CHIC2Q9UKJ5 165 aa17.43■□□□□ 0.38
LSM2-214ENST00000493387 HECW2Q9P2P5 1572 aa17.43■□□□□ 0.38
LSM2-214ENST00000493387 CROCC2H7BZ55 1655 aa17.42■□□□□ 0.38
LSM2-214ENST00000493387 ATP7AQ04656 1500 aa17.42■□□□□ 0.38
LSM2-214ENST00000493387 PTPRKQ15262 1439 aa17.41■□□□□ 0.38
LSM2-214ENST00000493387 ADGRL2O95490 1459 aa17.4■□□□□ 0.38
LSM2-214ENST00000493387 ZFYVE16Q7Z3T8 1539 aa17.4■□□□□ 0.38
LSM2-214ENST00000493387 INO80Q9ULG1 1556 aaPredicted RBP17.4■□□□□ 0.38
LSM2-214ENST00000493387 NCOA1Q15788 1441 aa17.39■□□□□ 0.38
LSM2-214ENST00000493387 KIDINS220Q9ULH0 1771 aa17.38■□□□□ 0.37
LSM2-214ENST00000493387 ATP10AO60312 1499 aa17.37■□□□□ 0.37
LSM2-214ENST00000493387 RRP7BPQ9NSQ0 103 aa17.37■□□□□ 0.37
LSM2-214ENST00000493387 KIF15Q9NS87 1388 aa17.37■□□□□ 0.37
LSM2-214ENST00000493387 YEATS2Q9ULM3 1422 aa17.37■□□□□ 0.37
LSM2-214ENST00000493387 PLXNC1O60486 1568 aa17.36■□□□□ 0.37
LSM2-214ENST00000493387 DHX29Q7Z478 1369 aaKnown RBP17.35■□□□□ 0.37
LSM2-214ENST00000493387 ARHGEF40Q8TER5 1519 aa17.35■□□□□ 0.37
LSM2-214ENST00000493387 ADGBQ8N7X0 1667 aa17.35■□□□□ 0.37
LSM2-214ENST00000493387 DUOX2Q9NRD8 1548 aa17.33■□□□□ 0.37
LSM2-214ENST00000493387 A2MP01023 1474 aa17.33■□□□□ 0.37
LSM2-214ENST00000493387 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
LSM2-214ENST00000493387 ABCA6Q8N139 1617 aa17.32■□□□□ 0.36
LSM2-214ENST00000493387 HFM1A2PYH4 1435 aa17.31■□□□□ 0.36
LSM2-214ENST00000493387 REREQ9P2R6 1566 aa17.31■□□□□ 0.36
LSM2-214ENST00000493387 ACIN1Q9UKV3 1341 aaKnown RBP17.3■□□□□ 0.36
LSM2-214ENST00000493387 ERBINQ96RT1 1412 aa17.3■□□□□ 0.36
LSM2-214ENST00000493387 ANKRD50Q9ULJ7 1429 aa17.3■□□□□ 0.36
LSM2-214ENST00000493387 NAIPQ13075 1403 aa17.29■□□□□ 0.36
LSM2-214ENST00000493387 AGLP35573 1532 aa17.27■□□□□ 0.36
LSM2-214ENST00000493387 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.35
LSM2-214ENST00000493387 ARID4BQ4LE39 1312 aaPredicted RBP17.26■□□□□ 0.35
LSM2-214ENST00000493387 KIF3BO15066 747 aa17.26■□□□□ 0.35
LSM2-214ENST00000493387 HRCP23327 699 aa17.25■□□□□ 0.35
LSM2-214ENST00000493387 PCGF6Q9BYE7 350 aa17.25■□□□□ 0.35
LSM2-214ENST00000493387 PPP6R1Q9UPN7 881 aa17.24■□□□□ 0.35
LSM2-214ENST00000493387 GCC2Q8IWJ2 1684 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms