RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 WASHC2CQ9Y4E1 1318 aa17.64■□□□□ 0.41
PTK7-218ENST00000493339 PPM1GO15355 546 aaPredicted RBP17.64■□□□□ 0.41
PTK7-218ENST00000493339 EXOC6Q8TAG9 804 aa17.63■□□□□ 0.41
PTK7-218ENST00000493339 NBPF8Q3BBV2 869 aa17.63■□□□□ 0.41
PTK7-218ENST00000493339 FYCO1Q9BQS8 1478 aa17.62■□□□□ 0.41
PTK7-218ENST00000493339 ARXQ96QS3 562 aa17.61■□□□□ 0.41
PTK7-218ENST00000493339 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
PTK7-218ENST00000493339 CASKIN1Q8WXD9 1431 aa17.61■□□□□ 0.41
PTK7-218ENST00000493339 BACH2Q9BYV9 841 aa17.59■□□□□ 0.41
PTK7-218ENST00000493339 GSE1Q14687 1217 aa17.59■□□□□ 0.41
PTK7-218ENST00000493339 MPHOSPH9Q99550 1183 aa17.58■□□□□ 0.41
PTK7-218ENST00000493339 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
PTK7-218ENST00000493339 SKAP1Q86WV1 359 aa17.56■□□□□ 0.4
PTK7-218ENST00000493339 TMC1Q8TDI8 760 aa17.56■□□□□ 0.4
PTK7-218ENST00000493339 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
PTK7-218ENST00000493339 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
PTK7-218ENST00000493339 RRP1P56182 461 aaKnown RBP17.55■□□□□ 0.4
PTK7-218ENST00000493339 MYOM3Q5VTT5 1437 aa17.54■□□□□ 0.4
PTK7-218ENST00000493339 NFKBIBQ15653 356 aa17.53■□□□□ 0.4
PTK7-218ENST00000493339 FRAT1Q92837 279 aaPredicted RBP17.53■□□□□ 0.4
PTK7-218ENST00000493339 CFTRP13569 1480 aa17.53■□□□□ 0.4
PTK7-218ENST00000493339 PNISRQ8TF01 805 aaKnown RBP17.52■□□□□ 0.4
PTK7-218ENST00000493339 ZNF326Q5BKZ1 582 aaKnown RBP17.52■□□□□ 0.39
PTK7-218ENST00000493339 DHX29Q7Z478 1369 aaKnown RBP17.51■□□□□ 0.39
PTK7-218ENST00000493339 RCAN3Q9UKA8 241 aa17.49■□□□□ 0.39
PTK7-218ENST00000493339 MS4A1P11836 297 aa17.49■□□□□ 0.39
PTK7-218ENST00000493339 DDRGK1Q96HY6 314 aa17.48■□□□□ 0.39
PTK7-218ENST00000493339 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
PTK7-218ENST00000493339 KDM6BO15054 1643 aa17.45■□□□□ 0.38
PTK7-218ENST00000493339 PLIN1O60240 522 aa17.45■□□□□ 0.38
PTK7-218ENST00000493339 EFCAB5A4FU69 1503 aa17.43■□□□□ 0.38
PTK7-218ENST00000493339 SNAPC4Q5SXM2 1469 aa17.43■□□□□ 0.38
PTK7-218ENST00000493339 HECW1Q76N89 1606 aa17.42■□□□□ 0.38
PTK7-218ENST00000493339 SLC4A1APQ9BWU0 796 aaKnown RBP17.41■□□□□ 0.38
PTK7-218ENST00000493339 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
PTK7-218ENST00000493339 RPRD2Q5VT52 1461 aaKnown RBP17.39■□□□□ 0.37
PTK7-218ENST00000493339 USP47Q96K76 1375 aa17.39■□□□□ 0.37
PTK7-218ENST00000493339 TEX14Q8IWB6 1497 aa17.39■□□□□ 0.37
PTK7-218ENST00000493339 FRAT2O75474 233 aaPredicted RBP17.38■□□□□ 0.37
PTK7-218ENST00000493339 ARID3CA6NKF2 412 aa17.38■□□□□ 0.37
PTK7-218ENST00000493339 CDCA7LQ96GN5 454 aa17.38■□□□□ 0.37
PTK7-218ENST00000493339 ABCA5Q8WWZ7 1642 aa17.38■□□□□ 0.37
PTK7-218ENST00000493339 CRBNQ96SW2 442 aa17.36■□□□□ 0.37
PTK7-218ENST00000493339 HMGXB3Q12766 1538 aa17.36■□□□□ 0.37
PTK7-218ENST00000493339 DCAF11Q8TEB1 546 aa17.36■□□□□ 0.37
PTK7-218ENST00000493339 RSPH6AQ9H0K4 717 aa17.35■□□□□ 0.37
PTK7-218ENST00000493339 SUPT6HQ7KZ85 1726 aaKnown RBP17.35■□□□□ 0.37
PTK7-218ENST00000493339 MIA2Q96PC5 1412 aa17.34■□□□□ 0.37
PTK7-218ENST00000493339 RAD54L2Q9Y4B4 1467 aa17.33■□□□□ 0.36
PTK7-218ENST00000493339 LRPPRCP42704 1394 aaKnown RBP17.33■□□□□ 0.36
PTK7-218ENST00000493339 TAOK2Q9UL54 1235 aa17.32■□□□□ 0.36
PTK7-218ENST00000493339 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
PTK7-218ENST00000493339 FAM43AQ8N2R8 423 aa17.31■□□□□ 0.36
PTK7-218ENST00000493339 UGGT2Q9NYU1 1516 aa17.31■□□□□ 0.36
PTK7-218ENST00000493339 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
PTK7-218ENST00000493339 EHBP1L1Q8N3D4 1523 aa17.31■□□□□ 0.36
PTK7-218ENST00000493339 BCORL1Q5H9F3 1711 aa17.3■□□□□ 0.36
PTK7-218ENST00000493339 POLR1AO95602 1720 aaPredicted RBP17.3■□□□□ 0.36
PTK7-218ENST00000493339 LRRIQ1Q96JM4 1722 aa17.3■□□□□ 0.36
PTK7-218ENST00000493339 KIF15Q9NS87 1388 aa17.3■□□□□ 0.36
PTK7-218ENST00000493339 BRD4O60885 1362 aaPredicted RBP17.28■□□□□ 0.36
PTK7-218ENST00000493339 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
PTK7-218ENST00000493339 MAGI3Q5TCQ9 1506 aa17.28■□□□□ 0.36
PTK7-218ENST00000493339 C20orf194Q5TEA3 1177 aa17.28■□□□□ 0.36
PTK7-218ENST00000493339 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
PTK7-218ENST00000493339 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
PTK7-218ENST00000493339 CARD11Q9BXL7 1154 aa17.26■□□□□ 0.35
PTK7-218ENST00000493339 TCOF1Q13428 1488 aaKnown RBP17.26■□□□□ 0.35
PTK7-218ENST00000493339 TULP1O00294 542 aaPredicted RBP17.25■□□□□ 0.35
PTK7-218ENST00000493339 RGS3P49796 1198 aa17.25■□□□□ 0.35
PTK7-218ENST00000493339 RALBP1Q15311 655 aa17.25■□□□□ 0.35
PTK7-218ENST00000493339 PKNOX2Q96KN3 472 aa17.25■□□□□ 0.35
PTK7-218ENST00000493339 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
PTK7-218ENST00000493339 ROCK2O75116 1388 aaKnown RBP17.24■□□□□ 0.35
PTK7-218ENST00000493339 ST20-MTHFSA0A0A6YYL1 179 aa17.23■□□□□ 0.35
PTK7-218ENST00000493339 ARID4BQ4LE39 1312 aaPredicted RBP17.23■□□□□ 0.35
PTK7-218ENST00000493339 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
PTK7-218ENST00000493339 C8orf34Q49A92 452 aa17.22■□□□□ 0.35
PTK7-218ENST00000493339 POGKQ9P215 609 aa17.22■□□□□ 0.35
PTK7-218ENST00000493339 ARHGEF11O15085 1522 aa17.22■□□□□ 0.35
PTK7-218ENST00000493339 NLRP13Q86W25 1043 aa17.22■□□□□ 0.35
PTK7-218ENST00000493339 ZNF644Q9H582 1327 aaPredicted RBP17.21■□□□□ 0.35
PTK7-218ENST00000493339 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.35
PTK7-218ENST00000493339 RRAGDQ9NQL2 400 aaPredicted RBP17.2■□□□□ 0.34
PTK7-218ENST00000493339 KTN1Q86UP2 1357 aaKnown RBP17.19■□□□□ 0.34
PTK7-218ENST00000493339 KDM2BQ8NHM5 1336 aa17.18■□□□□ 0.34
PTK7-218ENST00000493339 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
PTK7-218ENST00000493339 PKD2Q13563 968 aa17.17■□□□□ 0.34
PTK7-218ENST00000493339 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
PTK7-218ENST00000493339 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
PTK7-218ENST00000493339 DAPK1P53355 1430 aa17.16■□□□□ 0.34
PTK7-218ENST00000493339 KDM5CP41229 1560 aa17.15■□□□□ 0.34
PTK7-218ENST00000493339 POLA1P09884 1462 aaPredicted RBP17.15■□□□□ 0.34
PTK7-218ENST00000493339 SLKQ9H2G2 1235 aaPredicted RBP17.15■□□□□ 0.34
PTK7-218ENST00000493339 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
PTK7-218ENST00000493339 SAMD9Q5K651 1589 aa17.15■□□□□ 0.34
PTK7-218ENST00000493339 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
PTK7-218ENST00000493339 MBD5Q9P267 1494 aa17.14■□□□□ 0.33
PTK7-218ENST00000493339 GLIPR1L2Q4G1C9 344 aa17.13■□□□□ 0.33
PTK7-218ENST00000493339 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms