RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 NISCHQ9Y2I1 1504 aa24.63■■□□□ 1.53
PTK7-218ENST00000493339 HRCP23327 699 aa22.32■■□□□ 1.16
PTK7-218ENST00000493339 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.14
PTK7-218ENST00000493339 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
PTK7-218ENST00000493339 PPARGC1BQ86YN6 1023 aaKnown RBP21.99■■□□□ 1.11
PTK7-218ENST00000493339 PCGF6Q9BYE7 350 aa21.97■■□□□ 1.11
PTK7-218ENST00000493339 MYO15BQ96JP2 1530 aa21.74■■□□□ 1.07
PTK7-218ENST00000493339 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
PTK7-218ENST00000493339 PELP1Q8IZL8 1130 aaKnown RBP21.49■■□□□ 1.03
PTK7-218ENST00000493339 LOC105371045A0A1W2PR82 267 aa21.23■□□□□ 0.99
PTK7-218ENST00000493339 DCAF1Q9Y4B6 1507 aa21.18■□□□□ 0.98
PTK7-218ENST00000493339 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
PTK7-218ENST00000493339 TRIM26Q12899 539 aaPredicted RBP21.14■□□□□ 0.97
PTK7-218ENST00000493339 ZCCHC6Q5VYS8 1495 aaKnown RBP20.94■□□□□ 0.94
PTK7-218ENST00000493339 ZEB1P37275 1124 aaPredicted RBP20.92■□□□□ 0.94
PTK7-218ENST00000493339 CCDC180Q9P1Z9 1646 aa20.9■□□□□ 0.94
PTK7-218ENST00000493339 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
PTK7-218ENST00000493339 SLC24A1O60721 1099 aa20.67■□□□□ 0.9
PTK7-218ENST00000493339 ACIN1Q9UKV3 1341 aaKnown RBP20.62■□□□□ 0.89
PTK7-218ENST00000493339 MYT1Q01538 1121 aa20.61■□□□□ 0.89
PTK7-218ENST00000493339 NEUROD1Q13562 356 aa20.61■□□□□ 0.89
PTK7-218ENST00000493339 GTF3C3Q9Y5Q9 886 aa20.52■□□□□ 0.88
PTK7-218ENST00000493339 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
PTK7-218ENST00000493339 FAM9AQ8IZU1 332 aaPredicted RBP20.47■□□□□ 0.87
PTK7-218ENST00000493339 CENPBP07199 599 aaPredicted RBP20.37■□□□□ 0.85
PTK7-218ENST00000493339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.35■□□□□ 0.85
PTK7-218ENST00000493339 TRIM41Q8WV44 630 aa20.35■□□□□ 0.85
PTK7-218ENST00000493339 CCER1Q8TC90 406 aaPredicted RBP20.3■□□□□ 0.84
PTK7-218ENST00000493339 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
PTK7-218ENST00000493339 YTHDC1Q96MU7 727 aaKnown RBP20.1■□□□□ 0.81
PTK7-218ENST00000493339 TTBK1Q5TCY1 1321 aaPredicted RBP20■□□□□ 0.79
PTK7-218ENST00000493339 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
PTK7-218ENST00000493339 ABCC9O60706 1549 aa19.9■□□□□ 0.78
PTK7-218ENST00000493339 ZNF316A6NFI3 1004 aaPredicted RBP19.85■□□□□ 0.77
PTK7-218ENST00000493339 RB1CC1Q8TDY2 1594 aa19.84■□□□□ 0.77
PTK7-218ENST00000493339 MIER1Q8N108 512 aa19.78■□□□□ 0.76
PTK7-218ENST00000493339 SCRIBQ14160 1630 aa19.59■□□□□ 0.73
PTK7-218ENST00000493339 SUPT16HQ9Y5B9 1047 aaKnown RBP19.48■□□□□ 0.71
PTK7-218ENST00000493339 HNRNPUL2Q1KMD3 747 aaKnown RBP19.47■□□□□ 0.71
PTK7-218ENST00000493339 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
PTK7-218ENST00000493339 BCL11AQ9H165 835 aa19.45■□□□□ 0.7
PTK7-218ENST00000493339 CEP162Q5TB80 1403 aa19.45■□□□□ 0.7
PTK7-218ENST00000493339 ANP32EQ9BTT0 268 aa19.44■□□□□ 0.7
PTK7-218ENST00000493339 TSHZ2Q9NRE2 1034 aa19.4■□□□□ 0.7
PTK7-218ENST00000493339 CECR2Q9BXF3 1484 aa19.37■□□□□ 0.69
PTK7-218ENST00000493339 UBTFP17480 764 aaKnown RBP19.35■□□□□ 0.69
PTK7-218ENST00000493339 MROH2BQ7Z745 1585 aa19.31■□□□□ 0.68
PTK7-218ENST00000493339 CLSPNQ9HAW4 1339 aa19.29■□□□□ 0.68
PTK7-218ENST00000493339 CSRNP3Q8WYN3 585 aa19.28■□□□□ 0.68
PTK7-218ENST00000493339 TNIKQ9UKE5 1360 aa19.25■□□□□ 0.67
PTK7-218ENST00000493339 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
PTK7-218ENST00000493339 WIZO95785 1651 aa19.23■□□□□ 0.67
PTK7-218ENST00000493339 SOGA1O94964 1423 aa19.22■□□□□ 0.67
PTK7-218ENST00000493339 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
PTK7-218ENST00000493339 BCANQ96GW7 911 aa19.2■□□□□ 0.66
PTK7-218ENST00000493339 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
PTK7-218ENST00000493339 RUSC2Q8N2Y8 1516 aa19.09■□□□□ 0.65
PTK7-218ENST00000493339 APLP2Q06481 763 aa19.05■□□□□ 0.64
PTK7-218ENST00000493339 KCNH8Q96L42 1107 aa19.05■□□□□ 0.64
PTK7-218ENST00000493339 RANGAP1P46060 587 aaPredicted RBP19.03■□□□□ 0.64
PTK7-218ENST00000493339 FKBP8Q14318 412 aa19.02■□□□□ 0.63
PTK7-218ENST00000493339 BAZ1AQ9NRL2 1556 aaPredicted RBP19.01■□□□□ 0.63
PTK7-218ENST00000493339 GOLGA3Q08378 1498 aa19■□□□□ 0.63
PTK7-218ENST00000493339 EEA1Q15075 1411 aa18.95■□□□□ 0.62
PTK7-218ENST00000493339 RBM19Q9Y4C8 960 aaKnown RBP18.95■□□□□ 0.62
PTK7-218ENST00000493339 DHX57Q6P158 1386 aaKnown RBP18.93■□□□□ 0.62
PTK7-218ENST00000493339 CLIP1P30622 1438 aa18.92■□□□□ 0.62
PTK7-218ENST00000493339 ITGAEP38570 1179 aa18.89■□□□□ 0.61
PTK7-218ENST00000493339 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
PTK7-218ENST00000493339 VPS8Q8N3P4 1428 aa18.86■□□□□ 0.61
PTK7-218ENST00000493339 NACADO15069 1562 aa18.85■□□□□ 0.61
PTK7-218ENST00000493339 NEFLP07196 543 aa18.84■□□□□ 0.61
PTK7-218ENST00000493339 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
PTK7-218ENST00000493339 CEP164Q9UPV0 1460 aa18.79■□□□□ 0.6
PTK7-218ENST00000493339 MSH5O43196 834 aa18.78■□□□□ 0.6
PTK7-218ENST00000493339 SMARCA2P51531 1590 aa18.77■□□□□ 0.6
PTK7-218ENST00000493339 DDX10Q13206 875 aaKnown RBP18.75■□□□□ 0.59
PTK7-218ENST00000493339 TRIM52Q96A61 297 aa18.75■□□□□ 0.59
PTK7-218ENST00000493339 RTN4Q9NQC3 1192 aaKnown RBP18.73■□□□□ 0.59
PTK7-218ENST00000493339 AEBP2Q6ZN18 517 aaPredicted RBP18.7■□□□□ 0.58
PTK7-218ENST00000493339 ERICH6Q7L0X2 663 aa18.7■□□□□ 0.58
PTK7-218ENST00000493339 KANK4Q5T7N3 995 aaPredicted RBP18.68■□□□□ 0.58
PTK7-218ENST00000493339 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
PTK7-218ENST00000493339 KIF21BO75037 1637 aa18.65■□□□□ 0.58
PTK7-218ENST00000493339 DAXXQ9UER7 740 aaPredicted RBP18.63■□□□□ 0.57
PTK7-218ENST00000493339 HIRIP3Q9BW71 556 aaPredicted RBP18.62■□□□□ 0.57
PTK7-218ENST00000493339 PRKCSHP14314 528 aaPredicted RBP18.59■□□□□ 0.57
PTK7-218ENST00000493339 IRX6P78412 446 aaPredicted RBP18.57■□□□□ 0.56
PTK7-218ENST00000493339 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
PTK7-218ENST00000493339 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
PTK7-218ENST00000493339 CDK11AQ9UQ88 783 aaPredicted RBP18.54■□□□□ 0.56
PTK7-218ENST00000493339 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
PTK7-218ENST00000493339 FANCIQ9NVI1 1328 aa18.53■□□□□ 0.56
PTK7-218ENST00000493339 ANP32CO43423 234 aa18.52■□□□□ 0.56
PTK7-218ENST00000493339 SIN3AQ96ST3 1273 aa18.51■□□□□ 0.55
PTK7-218ENST00000493339 PPP1R15AO75807 674 aaPredicted RBP18.51■□□□□ 0.55
PTK7-218ENST00000493339 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
PTK7-218ENST00000493339 RAB3GAP2Q9H2M9 1393 aa18.49■□□□□ 0.55
PTK7-218ENST00000493339 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
PTK7-218ENST00000493339 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms