RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ASXL2Q76L83 1435 aa12.51□□□□□ -0.41
PRPF4B-208ENST00000490653 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
PRPF4B-208ENST00000490653 TSPOAP1O95153 1857 aa12.5□□□□□ -0.41
PRPF4B-208ENST00000490653 TNIKQ9UKE5 1360 aa12.49□□□□□ -0.41
PRPF4B-208ENST00000490653 GLI2P10070 1586 aa12.48□□□□□ -0.41
PRPF4B-208ENST00000490653 UHRF1BP1LA0JNW5 1464 aa12.47□□□□□ -0.41
PRPF4B-208ENST00000490653 ADGRL1O94910 1474 aa12.46□□□□□ -0.41
PRPF4B-208ENST00000490653 EPRSP07814 1512 aaKnown RBP12.45□□□□□ -0.42
PRPF4B-208ENST00000490653 RAPGEF2Q9Y4G8 1499 aa12.45□□□□□ -0.42
PRPF4B-208ENST00000490653 KDM5BQ9UGL1 1544 aa12.44□□□□□ -0.42
PRPF4B-208ENST00000490653 DCBLD2Q96PD2 775 aa12.44□□□□□ -0.42
PRPF4B-208ENST00000490653 PLB1Q6P1J6 1458 aa12.44□□□□□ -0.42
PRPF4B-208ENST00000490653 UACAQ9BZF9 1416 aa12.44□□□□□ -0.42
PRPF4B-208ENST00000490653 IQGAP2Q13576 1575 aa12.42□□□□□ -0.42
PRPF4B-208ENST00000490653 MAP3K4Q9Y6R4 1608 aa12.4□□□□□ -0.42
PRPF4B-208ENST00000490653 CARMIL2Q6F5E8 1435 aa12.4□□□□□ -0.42
PRPF4B-208ENST00000490653 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
PRPF4B-208ENST00000490653 UGGT2Q9NYU1 1516 aa12.39□□□□□ -0.43
PRPF4B-208ENST00000490653 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
PRPF4B-208ENST00000490653 FAM9AQ8IZU1 332 aaPredicted RBP12.38□□□□□ -0.43
PRPF4B-208ENST00000490653 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
PRPF4B-208ENST00000490653 PRXQ9BXM0 1461 aa12.37□□□□□ -0.43
PRPF4B-208ENST00000490653 HECW2Q9P2P5 1572 aa12.37□□□□□ -0.43
PRPF4B-208ENST00000490653 ZCCHC11Q5TAX3 1644 aaKnown RBP12.37□□□□□ -0.43
PRPF4B-208ENST00000490653 P3H3Q8IVL6 736 aa12.35□□□□□ -0.43
PRPF4B-208ENST00000490653 KIAA0556O60303 1618 aa12.35□□□□□ -0.43
PRPF4B-208ENST00000490653 PROM2Q8N271 834 aa12.34□□□□□ -0.43
PRPF4B-208ENST00000490653 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
PRPF4B-208ENST00000490653 WDR7Q9Y4E6 1490 aa12.32□□□□□ -0.44
PRPF4B-208ENST00000490653 RANGAP1P46060 587 aaPredicted RBP12.3□□□□□ -0.44
PRPF4B-208ENST00000490653 ABCA8O94911 1581 aa12.3□□□□□ -0.44
PRPF4B-208ENST00000490653 TEX14Q8IWB6 1497 aa12.29□□□□□ -0.44
PRPF4B-208ENST00000490653 MAGI3Q5TCQ9 1506 aa12.29□□□□□ -0.44
PRPF4B-208ENST00000490653 CTTNBP2Q8WZ74 1663 aa12.28□□□□□ -0.44
PRPF4B-208ENST00000490653 ARID3CA6NKF2 412 aa12.27□□□□□ -0.45
PRPF4B-208ENST00000490653 CD109Q6YHK3 1445 aa12.27□□□□□ -0.45
PRPF4B-208ENST00000490653 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
PRPF4B-208ENST00000490653 GOLGA3Q08378 1498 aa12.21□□□□□ -0.45
PRPF4B-208ENST00000490653 KIF21BO75037 1637 aa12.21□□□□□ -0.46
PRPF4B-208ENST00000490653 ATP10BO94823 1461 aa12.21□□□□□ -0.46
PRPF4B-208ENST00000490653 ARAP3Q8WWN8 1544 aa12.2□□□□□ -0.46
PRPF4B-208ENST00000490653 CFAP43Q8NDM7 1665 aa12.19□□□□□ -0.46
PRPF4B-208ENST00000490653 EEA1Q15075 1411 aa12.19□□□□□ -0.46
PRPF4B-208ENST00000490653 MS4A3Q96HJ5 214 aa12.17□□□□□ -0.46
PRPF4B-208ENST00000490653 PTPRMP28827 1452 aa12.16□□□□□ -0.46
PRPF4B-208ENST00000490653 POTEB2H3BUK9 544 aa12.16□□□□□ -0.46
PRPF4B-208ENST00000490653 RAPGEF3O95398 923 aa12.16□□□□□ -0.46
PRPF4B-208ENST00000490653 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
PRPF4B-208ENST00000490653 FRMPD1Q5SYB0 1578 aa12.16□□□□□ -0.46
PRPF4B-208ENST00000490653 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
PRPF4B-208ENST00000490653 FHOD3Q2V2M9 1422 aa12.15□□□□□ -0.46
PRPF4B-208ENST00000490653 OTUD5Q96G74 571 aa12.15□□□□□ -0.46
PRPF4B-208ENST00000490653 SAMD9Q5K651 1589 aa12.14□□□□□ -0.47
PRPF4B-208ENST00000490653 UBTFP17480 764 aaKnown RBP12.14□□□□□ -0.47
PRPF4B-208ENST00000490653 ABCA9Q8IUA7 1624 aa12.13□□□□□ -0.47
PRPF4B-208ENST00000490653 ASTLQ6HA08 431 aaPredicted RBP12.13□□□□□ -0.47
PRPF4B-208ENST00000490653 FBXO41Q8TF61 875 aa12.12□□□□□ -0.47
PRPF4B-208ENST00000490653 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
PRPF4B-208ENST00000490653 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
PRPF4B-208ENST00000490653 LMTK3Q96Q04 1460 aa12.11□□□□□ -0.47
PRPF4B-208ENST00000490653 ATMINO43313 823 aaPredicted RBP12.1□□□□□ -0.47
PRPF4B-208ENST00000490653 NUP153P49790 1475 aaKnown RBP12.09□□□□□ -0.47
PRPF4B-208ENST00000490653 SIGLEC1Q9BZZ2 1709 aa12.08□□□□□ -0.47
PRPF4B-208ENST00000490653 RAPGEF6Q8TEU7 1601 aa12.08□□□□□ -0.48
PRPF4B-208ENST00000490653 MADDQ8WXG6 1647 aa12.07□□□□□ -0.48
PRPF4B-208ENST00000490653 NEO1Q92859 1461 aa12.07□□□□□ -0.48
PRPF4B-208ENST00000490653 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
PRPF4B-208ENST00000490653 SLC39A7Q92504 469 aa12.06□□□□□ -0.48
PRPF4B-208ENST00000490653 ATP1B4Q9UN42 357 aaPredicted RBP12.06□□□□□ -0.48
PRPF4B-208ENST00000490653 PCF11O94913 1555 aaKnown RBP12.05□□□□□ -0.48
PRPF4B-208ENST00000490653 METRNQ9UJH8 293 aa12.05□□□□□ -0.48
PRPF4B-208ENST00000490653 PHLDB1Q86UU1 1377 aa12.05□□□□□ -0.48
PRPF4B-208ENST00000490653 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
PRPF4B-208ENST00000490653 C7P10643 843 aa12.04□□□□□ -0.48
PRPF4B-208ENST00000490653 KIF12Q96FN5 646 aa12.04□□□□□ -0.48
PRPF4B-208ENST00000490653 YEATS2Q9ULM3 1422 aa12.03□□□□□ -0.48
PRPF4B-208ENST00000490653 ARHGAP35Q9NRY4 1499 aa12.03□□□□□ -0.48
PRPF4B-208ENST00000490653 PLEKHD1A6NEE1 506 aa12.03□□□□□ -0.48
PRPF4B-208ENST00000490653 HSPA2P54652 639 aa12.03□□□□□ -0.48
PRPF4B-208ENST00000490653 MIER1Q8N108 512 aa12.03□□□□□ -0.48
PRPF4B-208ENST00000490653 ARHGEF40Q8TER5 1519 aa12.01□□□□□ -0.49
PRPF4B-208ENST00000490653 CDK13Q14004 1512 aaKnown RBP12□□□□□ -0.49
PRPF4B-208ENST00000490653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12□□□□□ -0.49
PRPF4B-208ENST00000490653 RICTORQ6R327 1708 aa12□□□□□ -0.49
PRPF4B-208ENST00000490653 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
PRPF4B-208ENST00000490653 AKNAQ7Z591 1439 aa11.99□□□□□ -0.49
PRPF4B-208ENST00000490653 EFCAB5A4FU69 1503 aa11.99□□□□□ -0.49
PRPF4B-208ENST00000490653 TTC37Q6PGP7 1564 aa11.98□□□□□ -0.49
PRPF4B-208ENST00000490653 DENND4BO75064 1496 aaPredicted RBP11.98□□□□□ -0.49
PRPF4B-208ENST00000490653 ATN1P54259 1190 aaPredicted RBP11.98□□□□□ -0.49
PRPF4B-208ENST00000490653 RIMS1Q86UR5 1692 aaKnown RBP11.97□□□□□ -0.49
PRPF4B-208ENST00000490653 ARID4BQ4LE39 1312 aaPredicted RBP11.97□□□□□ -0.49
PRPF4B-208ENST00000490653 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.49
PRPF4B-208ENST00000490653 FANCAO15360 1455 aa11.96□□□□□ -0.49
PRPF4B-208ENST00000490653 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
PRPF4B-208ENST00000490653 MAP3K13O43283 966 aa11.95□□□□□ -0.5
PRPF4B-208ENST00000490653 BMP2KQ9NSY1 1161 aaPredicted RBP11.95□□□□□ -0.5
PRPF4B-208ENST00000490653 HECW1Q76N89 1606 aa11.93□□□□□ -0.5
PRPF4B-208ENST00000490653 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
PRPF4B-208ENST00000490653 ZFYVE16Q7Z3T8 1539 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms