RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
PRPF4B-208ENST00000490653 SERP2Q8N6R1 65 aa2.78□□□□□ -1.96
PRPF4B-208ENST00000490653 COA5Q86WW8 74 aa2.77□□□□□ -1.97
PRPF4B-208ENST00000490653 A0A0D9SG42 100 aa2.76□□□□□ -1.97
PRPF4B-208ENST00000490653 KRTAP19-7Q3SYF9 63 aa2.76□□□□□ -1.97
PRPF4B-208ENST00000490653 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
PRPF4B-208ENST00000490653 CAMK2N1Q7Z7J9 78 aa2.75□□□□□ -1.97
PRPF4B-208ENST00000490653 CYSTM1Q9H1C7 97 aa2.74□□□□□ -1.97
PRPF4B-208ENST00000490653 MT1EP04732 61 aa2.73□□□□□ -1.97
PRPF4B-208ENST00000490653 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
PRPF4B-208ENST00000490653 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
PRPF4B-208ENST00000490653 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
PRPF4B-208ENST00000490653 COX7CP15954 63 aa2.69□□□□□ -1.98
PRPF4B-208ENST00000490653 KRTAP12-1P59990 96 aa2.69□□□□□ -1.98
PRPF4B-208ENST00000490653 KRTAP19-3Q7Z4W3 81 aa2.69□□□□□ -1.98
PRPF4B-208ENST00000490653 SERP1Q9Y6X1 66 aa2.69□□□□□ -1.98
PRPF4B-208ENST00000490653 A0A1B0GU33 70 aa2.68□□□□□ -1.98
PRPF4B-208ENST00000490653 H7BZZ5 65 aa2.68□□□□□ -1.98
PRPF4B-208ENST00000490653 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
PRPF4B-208ENST00000490653 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
PRPF4B-208ENST00000490653 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
PRPF4B-208ENST00000490653 A8MU10 97 aa2.66□□□□□ -1.98
PRPF4B-208ENST00000490653 SEC61GP60059 68 aa2.66□□□□□ -1.98
PRPF4B-208ENST00000490653 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
PRPF4B-208ENST00000490653 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
PRPF4B-208ENST00000490653 MT4P47944 62 aa2.63□□□□□ -1.99
PRPF4B-208ENST00000490653 MT1GP13640 62 aa2.61□□□□□ -1.99
PRPF4B-208ENST00000490653 C10orf95Q9H7T3 257 aa2.61□□□□□ -1.99
PRPF4B-208ENST00000490653 MT1MQ8N339 61 aa2.6□□□□□ -1.99
PRPF4B-208ENST00000490653 MT1LQ93083 61 aa2.6□□□□□ -1.99
PRPF4B-208ENST00000490653 A0A1B0GU69 56 aa2.59□□□□□ -1.99
PRPF4B-208ENST00000490653 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
PRPF4B-208ENST00000490653 NDUFAF8A1L188 74 aa2.58□□□□□ -2
PRPF4B-208ENST00000490653 SMIM26A0A096LP01 95 aa2.57□□□□□ -2
PRPF4B-208ENST00000490653 CCDC179H3BU77 68 aa2.57□□□□□ -2
PRPF4B-208ENST00000490653 ANAPC13Q9BS18 74 aa2.55□□□□□ -2
PRPF4B-208ENST00000490653 PP632Q6XCG6 107 aa2.53□□□□□ -2
PRPF4B-208ENST00000490653 TNP1P09430 55 aa2.52□□□□□ -2.01
PRPF4B-208ENST00000490653 LINC01558Q9Y6Z2 57 aa2.49□□□□□ -2.01
PRPF4B-208ENST00000490653 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
PRPF4B-208ENST00000490653 PRR15LQ9BU68 103 aa2.45□□□□□ -2.02
PRPF4B-208ENST00000490653 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
PRPF4B-208ENST00000490653 ATP5EP56381 51 aaPredicted RBP2.42□□□□□ -2.02
PRPF4B-208ENST00000490653 SPRR5A0A1B0GTR4 108 aa2.41□□□□□ -2.02
PRPF4B-208ENST00000490653 UQCR11O14957 56 aa2.4□□□□□ -2.03
PRPF4B-208ENST00000490653 TMEM258P61165 79 aa2.37□□□□□ -2.03
PRPF4B-208ENST00000490653 MIR22HGQ0VDD5 57 aa2.37□□□□□ -2.03
PRPF4B-208ENST00000490653 PRAC1Q96KF2 57 aa2.37□□□□□ -2.03
PRPF4B-208ENST00000490653 SYNE1Q8NF91 8797 aaKnown RBP2.35□□□□□ -2.03
PRPF4B-208ENST00000490653 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
PRPF4B-208ENST00000490653 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
PRPF4B-208ENST00000490653 PSPHP1O15172 72 aa2.33□□□□□ -2.04
PRPF4B-208ENST00000490653 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
PRPF4B-208ENST00000490653 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
PRPF4B-208ENST00000490653 KRTAP12-4P60329 112 aa2.28□□□□□ -2.04
PRPF4B-208ENST00000490653 Q1T7F1 81 aa2.27□□□□□ -2.05
PRPF4B-208ENST00000490653 K7ERS5 55 aa2.25□□□□□ -2.05
PRPF4B-208ENST00000490653 V9GYY9 64 aa2.23□□□□□ -2.05
PRPF4B-208ENST00000490653 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
PRPF4B-208ENST00000490653 KRTAP6-1Q3LI64 71 aa2.22□□□□□ -2.05
PRPF4B-208ENST00000490653 A6NED7 52 aa2.2□□□□□ -2.06
PRPF4B-208ENST00000490653 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
PRPF4B-208ENST00000490653 MT1AP04731 61 aa2.19□□□□□ -2.06
PRPF4B-208ENST00000490653 ROMO1P60602 79 aa2.16□□□□□ -2.06
PRPF4B-208ENST00000490653 CDC42SE1Q9NRR8 79 aa2.16□□□□□ -2.06
PRPF4B-208ENST00000490653 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
PRPF4B-208ENST00000490653 RPS28P62857 69 aaKnown RBP2.11□□□□□ -2.07
PRPF4B-208ENST00000490653 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
PRPF4B-208ENST00000490653 BRK1Q8WUW1 75 aa1.82□□□□□ -2.12
PRPF4B-208ENST00000490653 PMAIP1Q13794 54 aa1.7□□□□□ -2.14
PRPF4B-208ENST00000490653 PRO0628Q9UI54 55 aa1.7□□□□□ -2.14
PRPF4B-208ENST00000490653 LUZP6Q538Z0 58 aa1.68□□□□□ -2.14
PRPF4B-208ENST00000490653 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
PRPF4B-208ENST00000490653 KTN1-AS1Q86SY8 53 aa1.44□□□□□ -2.18
PRPF4B-208ENST00000490653 PRM1P04553 51 aa1.13□□□□□ -2.23
PRPF4B-208ENST00000490653 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
PRPF4B-208ENST00000490653 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
PRPF4B-208ENST00000490653 INE1O15225 51 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms