RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 REM2Q8IYK8 340 aaPredicted RBP13.57□□□□□ -0.24
ERCC8-205ENST00000477893 ATP1B4Q9UN42 357 aaPredicted RBP13.57□□□□□ -0.24
ERCC8-205ENST00000477893 CD109Q6YHK3 1445 aa13.56□□□□□ -0.24
ERCC8-205ENST00000477893 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
ERCC8-205ENST00000477893 CFAP43Q8NDM7 1665 aa13.55□□□□□ -0.24
ERCC8-205ENST00000477893 HAX1O00165 279 aa13.54□□□□□ -0.24
ERCC8-205ENST00000477893 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
ERCC8-205ENST00000477893 COL17A1Q9UMD9 1497 aaPredicted RBP13.53□□□□□ -0.24
ERCC8-205ENST00000477893 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
ERCC8-205ENST00000477893 MAGI3Q5TCQ9 1506 aa13.5□□□□□ -0.25
ERCC8-205ENST00000477893 FMN1Q68DA7 1419 aa13.49□□□□□ -0.25
ERCC8-205ENST00000477893 HECW1Q76N89 1606 aa13.49□□□□□ -0.25
ERCC8-205ENST00000477893 ABCA9Q8IUA7 1624 aa13.49□□□□□ -0.25
ERCC8-205ENST00000477893 PLEKHD1A6NEE1 506 aa13.48□□□□□ -0.25
ERCC8-205ENST00000477893 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
ERCC8-205ENST00000477893 PCF11O94913 1555 aaKnown RBP13.45□□□□□ -0.26
ERCC8-205ENST00000477893 CLIP1P30622 1438 aa13.44□□□□□ -0.26
ERCC8-205ENST00000477893 TTC37Q6PGP7 1564 aa13.44□□□□□ -0.26
ERCC8-205ENST00000477893 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
ERCC8-205ENST00000477893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.42□□□□□ -0.26
ERCC8-205ENST00000477893 KDM4FA0A1W2PPD8 638 aa13.41□□□□□ -0.26
ERCC8-205ENST00000477893 LRRIQ1Q96JM4 1722 aa13.4□□□□□ -0.26
ERCC8-205ENST00000477893 RAPGEF3O95398 923 aa13.39□□□□□ -0.27
ERCC8-205ENST00000477893 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
ERCC8-205ENST00000477893 ADGRL1O94910 1474 aa13.39□□□□□ -0.27
ERCC8-205ENST00000477893 KIF14Q15058 1648 aa13.39□□□□□ -0.27
ERCC8-205ENST00000477893 NEO1Q92859 1461 aa13.38□□□□□ -0.27
ERCC8-205ENST00000477893 ARAP3Q8WWN8 1544 aa13.38□□□□□ -0.27
ERCC8-205ENST00000477893 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
ERCC8-205ENST00000477893 FANCAO15360 1455 aa13.37□□□□□ -0.27
ERCC8-205ENST00000477893 CDK11AQ9UQ88 783 aaPredicted RBP13.37□□□□□ -0.27
ERCC8-205ENST00000477893 TROQ12816 1431 aaPredicted RBP13.35□□□□□ -0.27
ERCC8-205ENST00000477893 CEP162Q5TB80 1403 aa13.35□□□□□ -0.27
ERCC8-205ENST00000477893 AKNAQ7Z591 1439 aa13.35□□□□□ -0.27
ERCC8-205ENST00000477893 FRMPD1Q5SYB0 1578 aa13.35□□□□□ -0.27
ERCC8-205ENST00000477893 CCDC18Q5T9S5 1454 aa13.35□□□□□ -0.27
ERCC8-205ENST00000477893 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
ERCC8-205ENST00000477893 PHLDB1Q86UU1 1377 aa13.34□□□□□ -0.27
ERCC8-205ENST00000477893 CFAP74Q9C0B2 1584 aa13.34□□□□□ -0.27
ERCC8-205ENST00000477893 LOC105371045A0A1W2PR82 267 aa13.34□□□□□ -0.27
ERCC8-205ENST00000477893 EVX2Q03828 476 aa13.33□□□□□ -0.28
ERCC8-205ENST00000477893 DENND4BO75064 1496 aaPredicted RBP13.32□□□□□ -0.28
ERCC8-205ENST00000477893 MYO5CQ9NQX4 1742 aa13.32□□□□□ -0.28
ERCC8-205ENST00000477893 PLCH2O75038 1416 aa13.31□□□□□ -0.28
ERCC8-205ENST00000477893 ARHGAP5Q13017 1502 aa13.31□□□□□ -0.28
ERCC8-205ENST00000477893 SCAPERQ9BY12 1400 aa13.29□□□□□ -0.28
ERCC8-205ENST00000477893 RICTORQ6R327 1708 aa13.28□□□□□ -0.28
ERCC8-205ENST00000477893 ARID4BQ4LE39 1312 aaPredicted RBP13.28□□□□□ -0.28
ERCC8-205ENST00000477893 ARHGEF40Q8TER5 1519 aa13.28□□□□□ -0.28
ERCC8-205ENST00000477893 EFCAB2Q5VUJ9 269 aa13.27□□□□□ -0.29
ERCC8-205ENST00000477893 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
ERCC8-205ENST00000477893 POGZQ7Z3K3 1410 aa13.26□□□□□ -0.29
ERCC8-205ENST00000477893 ZFYVE16Q7Z3T8 1539 aa13.25□□□□□ -0.29
ERCC8-205ENST00000477893 YEATS2Q9ULM3 1422 aa13.25□□□□□ -0.29
ERCC8-205ENST00000477893 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
ERCC8-205ENST00000477893 MYT1LQ9UL68 1186 aa13.24□□□□□ -0.29
ERCC8-205ENST00000477893 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
ERCC8-205ENST00000477893 ZNF777Q9ULD5 760 aaPredicted RBP13.23□□□□□ -0.29
ERCC8-205ENST00000477893 ZMYM4Q5VZL5 1548 aa13.23□□□□□ -0.29
ERCC8-205ENST00000477893 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
ERCC8-205ENST00000477893 MLECQ14165 292 aa13.21□□□□□ -0.29
ERCC8-205ENST00000477893 CDC42BPAQ5VT25 1732 aa13.2□□□□□ -0.3
ERCC8-205ENST00000477893 AFAP1Q8N556 730 aa13.2□□□□□ -0.3
ERCC8-205ENST00000477893 ABCC1P33527 1531 aa13.19□□□□□ -0.3
ERCC8-205ENST00000477893 ZNF518AQ6AHZ1 1483 aa13.19□□□□□ -0.3
ERCC8-205ENST00000477893 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
ERCC8-205ENST00000477893 MADDQ8WXG6 1647 aa13.19□□□□□ -0.3
ERCC8-205ENST00000477893 SIGLEC1Q9BZZ2 1709 aa13.19□□□□□ -0.3
ERCC8-205ENST00000477893 CCNB3Q8WWL7 1395 aa13.19□□□□□ -0.3
ERCC8-205ENST00000477893 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
ERCC8-205ENST00000477893 BCORL1Q5H9F3 1711 aa13.18□□□□□ -0.3
ERCC8-205ENST00000477893 ARHGEF12Q9NZN5 1544 aa13.18□□□□□ -0.3
ERCC8-205ENST00000477893 MAGI2Q86UL8 1455 aa13.17□□□□□ -0.3
ERCC8-205ENST00000477893 VPS8Q8N3P4 1428 aa13.17□□□□□ -0.3
ERCC8-205ENST00000477893 TRAPPC8Q9Y2L5 1435 aa13.17□□□□□ -0.3
ERCC8-205ENST00000477893 ADAMTSL3P82987 1691 aa13.17□□□□□ -0.3
ERCC8-205ENST00000477893 ITSN2Q9NZM3 1697 aa13.17□□□□□ -0.3
ERCC8-205ENST00000477893 GPATCH8Q9UKJ3 1502 aaKnown RBP13.17□□□□□ -0.3
ERCC8-205ENST00000477893 SAMD9LQ8IVG5 1584 aa13.16□□□□□ -0.3
ERCC8-205ENST00000477893 HECW2Q9P2P5 1572 aa13.16□□□□□ -0.3
ERCC8-205ENST00000477893 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
ERCC8-205ENST00000477893 KDM5CP41229 1560 aa13.15□□□□□ -0.3
ERCC8-205ENST00000477893 CFDP1Q9UEE9 299 aaPredicted RBP13.15□□□□□ -0.3
ERCC8-205ENST00000477893 PTPRMP28827 1452 aa13.15□□□□□ -0.3
ERCC8-205ENST00000477893 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
ERCC8-205ENST00000477893 RIMS1Q86UR5 1692 aaKnown RBP13.15□□□□□ -0.31
ERCC8-205ENST00000477893 C9orf84Q5VXU9 1444 aa13.14□□□□□ -0.31
ERCC8-205ENST00000477893 ATP10AO60312 1499 aa13.14□□□□□ -0.31
ERCC8-205ENST00000477893 ABCA6Q8N139 1617 aa13.13□□□□□ -0.31
ERCC8-205ENST00000477893 DIP2CQ9Y2E4 1556 aa13.13□□□□□ -0.31
ERCC8-205ENST00000477893 HNRNPMP52272 730 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERCC8-205ENST00000477893 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
ERCC8-205ENST00000477893 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
ERCC8-205ENST00000477893 SUPT6HQ7KZ85 1726 aaKnown RBP13.1□□□□□ -0.31
ERCC8-205ENST00000477893 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
ERCC8-205ENST00000477893 FER1L4A9Z1Z3 1794 aa13.09□□□□□ -0.31
ERCC8-205ENST00000477893 MLH3Q9UHC1 1453 aa13.09□□□□□ -0.31
ERCC8-205ENST00000477893 SPAG9O60271 1321 aaKnown RBP13.09□□□□□ -0.31
ERCC8-205ENST00000477893 LRRC9Q6ZRR7 1453 aa13.08□□□□□ -0.32
ERCC8-205ENST00000477893 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms