RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CFAP43Q8NDM7 1665 aa18.77■□□□□ 0.6
NPHP4-207ENST00000470763 TRHP20396 242 aaPredicted RBP18.77■□□□□ 0.59
NPHP4-207ENST00000470763 IL27Q8NEV9 243 aa18.77■□□□□ 0.59
NPHP4-207ENST00000470763 RTN4Q9NQC3 1192 aaKnown RBP18.77■□□□□ 0.59
NPHP4-207ENST00000470763 ANP32AP39687 249 aaKnown RBP18.76■□□□□ 0.59
NPHP4-207ENST00000470763 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
NPHP4-207ENST00000470763 IPO9Q96P70 1041 aaKnown RBP18.74■□□□□ 0.59
NPHP4-207ENST00000470763 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
NPHP4-207ENST00000470763 KDM5BQ9UGL1 1544 aa18.73■□□□□ 0.59
NPHP4-207ENST00000470763 CCDC136Q96JN2 1154 aa18.73■□□□□ 0.59
NPHP4-207ENST00000470763 PRKRIP1Q9H875 184 aaPredicted RBP18.73■□□□□ 0.59
NPHP4-207ENST00000470763 ZBTB47Q9UFB7 747 aaPredicted RBP18.72■□□□□ 0.59
NPHP4-207ENST00000470763 CNTLNQ9NXG0 1405 aa18.72■□□□□ 0.59
NPHP4-207ENST00000470763 AKNAQ7Z591 1439 aa18.71■□□□□ 0.59
NPHP4-207ENST00000470763 PTPRKQ15262 1439 aa18.71■□□□□ 0.58
NPHP4-207ENST00000470763 FHOD3Q2V2M9 1422 aa18.7■□□□□ 0.58
NPHP4-207ENST00000470763 SENP3-EIF4A1A0A087X0R7 540 aa18.7■□□□□ 0.58
NPHP4-207ENST00000470763 C11orf95C9JLR9 678 aaPredicted RBP18.7■□□□□ 0.58
NPHP4-207ENST00000470763 EIF4G2P78344 907 aaKnown RBP eCLIP18.7■□□□□ 0.583e-7■■■■■ 59.9
NPHP4-207ENST00000470763 CNGB1Q14028 1251 aaPredicted RBP18.7■□□□□ 0.58
NPHP4-207ENST00000470763 FGD6Q6ZV73 1430 aa18.68■□□□□ 0.58
NPHP4-207ENST00000470763 PTPN23Q9H3S7 1636 aa18.67■□□□□ 0.58
NPHP4-207ENST00000470763 HFM1A2PYH4 1435 aa18.67■□□□□ 0.58
NPHP4-207ENST00000470763 NCOA2Q15596 1464 aa18.66■□□□□ 0.58
NPHP4-207ENST00000470763 IQGAP2Q13576 1575 aa18.66■□□□□ 0.58
NPHP4-207ENST00000470763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.66■□□□□ 0.58
NPHP4-207ENST00000470763 NPM2Q86SE8 214 aaKnown RBP18.64■□□□□ 0.57
NPHP4-207ENST00000470763 NAIPQ13075 1403 aa18.63■□□□□ 0.57
NPHP4-207ENST00000470763 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.63■□□□□ 0.57
NPHP4-207ENST00000470763 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
NPHP4-207ENST00000470763 ADCY10Q96PN6 1610 aa18.61■□□□□ 0.57
NPHP4-207ENST00000470763 LAS1LQ9Y4W2 734 aaKnown RBP18.6■□□□□ 0.57
NPHP4-207ENST00000470763 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
NPHP4-207ENST00000470763 RRP7BPQ9NSQ0 103 aa18.59■□□□□ 0.57
NPHP4-207ENST00000470763 FYCO1Q9BQS8 1478 aa18.59■□□□□ 0.57
NPHP4-207ENST00000470763 MTUS2Q5JR59 1369 aa18.57■□□□□ 0.56
NPHP4-207ENST00000470763 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
NPHP4-207ENST00000470763 PTPRGP23470 1445 aa18.57■□□□□ 0.56
NPHP4-207ENST00000470763 CARMIL2Q6F5E8 1435 aa18.57■□□□□ 0.56
NPHP4-207ENST00000470763 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
NPHP4-207ENST00000470763 UGGT2Q9NYU1 1516 aa18.56■□□□□ 0.56
NPHP4-207ENST00000470763 FMN1Q68DA7 1419 aa18.56■□□□□ 0.56
NPHP4-207ENST00000470763 SMG6Q86US8 1419 aaKnown RBP18.56■□□□□ 0.56
NPHP4-207ENST00000470763 NUDCQ9Y266 331 aa18.56■□□□□ 0.56
NPHP4-207ENST00000470763 L3MBTL2Q969R5 705 aa18.56■□□□□ 0.56
NPHP4-207ENST00000470763 CASKIN1Q8WXD9 1431 aa18.55■□□□□ 0.56
NPHP4-207ENST00000470763 NEFMP07197 916 aa18.55■□□□□ 0.56
NPHP4-207ENST00000470763 FOXD1Q16676 465 aa18.54■□□□□ 0.56
NPHP4-207ENST00000470763 CTTNBP2Q8WZ74 1663 aa18.52■□□□□ 0.56
NPHP4-207ENST00000470763 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.55
NPHP4-207ENST00000470763 KIF13AQ9H1H9 1805 aa18.51■□□□□ 0.55
NPHP4-207ENST00000470763 DENND4BO75064 1496 aaPredicted RBP18.5■□□□□ 0.55
NPHP4-207ENST00000470763 KIAA0556O60303 1618 aa18.5■□□□□ 0.55
NPHP4-207ENST00000470763 RNF123Q5XPI4 1314 aa18.5■□□□□ 0.55
NPHP4-207ENST00000470763 POLR3GLQ9BT43 218 aa18.5■□□□□ 0.55
NPHP4-207ENST00000470763 NPM1P06748 294 aaKnown RBP eCLIP18.48■□□□□ 0.55
NPHP4-207ENST00000470763 NBPF8Q3BBV2 869 aa18.48■□□□□ 0.55
NPHP4-207ENST00000470763 MYOM3Q5VTT5 1437 aa18.46■□□□□ 0.55
NPHP4-207ENST00000470763 ABCC10Q5T3U5 1492 aa18.45■□□□□ 0.54
NPHP4-207ENST00000470763 ABCC2Q92887 1545 aa18.44■□□□□ 0.54
NPHP4-207ENST00000470763 MPHOSPH9Q99550 1183 aa18.44■□□□□ 0.54
NPHP4-207ENST00000470763 UHRF1BP1LA0JNW5 1464 aa18.44■□□□□ 0.54
NPHP4-207ENST00000470763 KDM6BO15054 1643 aa18.43■□□□□ 0.54
NPHP4-207ENST00000470763 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
NPHP4-207ENST00000470763 EFCAB5A4FU69 1503 aa18.42■□□□□ 0.54
NPHP4-207ENST00000470763 FAM69CQ0P6D2 419 aa18.42■□□□□ 0.54
NPHP4-207ENST00000470763 PDE4AP27815 886 aa18.41■□□□□ 0.54
NPHP4-207ENST00000470763 BRPF3Q9ULD4 1205 aa18.41■□□□□ 0.54
NPHP4-207ENST00000470763 HECW1Q76N89 1606 aa18.41■□□□□ 0.54
NPHP4-207ENST00000470763 EXOC6Q8TAG9 804 aa18.4■□□□□ 0.54
NPHP4-207ENST00000470763 USP35Q9P2H5 1018 aa18.39■□□□□ 0.53
NPHP4-207ENST00000470763 LRRIQ1Q96JM4 1722 aa18.38■□□□□ 0.53
NPHP4-207ENST00000470763 WASHC2CQ9Y4E1 1318 aa18.37■□□□□ 0.53
NPHP4-207ENST00000470763 PLB1Q6P1J6 1458 aa18.37■□□□□ 0.53
NPHP4-207ENST00000470763 DHX29Q7Z478 1369 aaKnown RBP18.37■□□□□ 0.53
NPHP4-207ENST00000470763 TCERG1O14776 1098 aaKnown RBP18.36■□□□□ 0.53
NPHP4-207ENST00000470763 SPATA31E1Q6ZUB1 1445 aa18.36■□□□□ 0.53
NPHP4-207ENST00000470763 ASXL2Q76L83 1435 aa18.36■□□□□ 0.53
NPHP4-207ENST00000470763 BACH2Q9BYV9 841 aa18.35■□□□□ 0.53
NPHP4-207ENST00000470763 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
NPHP4-207ENST00000470763 GCC2Q8IWJ2 1684 aa18.34■□□□□ 0.53
NPHP4-207ENST00000470763 PPM1GO15355 546 aaPredicted RBP18.34■□□□□ 0.53
NPHP4-207ENST00000470763 POLR1AO95602 1720 aaPredicted RBP18.34■□□□□ 0.53
NPHP4-207ENST00000470763 RRP1P56182 461 aaKnown RBP18.34■□□□□ 0.53
NPHP4-207ENST00000470763 TMC1Q8TDI8 760 aa18.34■□□□□ 0.53
NPHP4-207ENST00000470763 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.53
NPHP4-207ENST00000470763 SKAP1Q86WV1 359 aa18.33■□□□□ 0.53
NPHP4-207ENST00000470763 PNISRQ8TF01 805 aaKnown RBP18.33■□□□□ 0.52
NPHP4-207ENST00000470763 ZCCHC11Q5TAX3 1644 aaKnown RBP18.33■□□□□ 0.52
NPHP4-207ENST00000470763 ABCA8O94911 1581 aa18.32■□□□□ 0.52
NPHP4-207ENST00000470763 ZNF326Q5BKZ1 582 aaKnown RBP18.32■□□□□ 0.52
NPHP4-207ENST00000470763 SAMD9Q5K651 1589 aa18.31■□□□□ 0.52
NPHP4-207ENST00000470763 TEX14Q8IWB6 1497 aa18.3■□□□□ 0.52
NPHP4-207ENST00000470763 GSE1Q14687 1217 aa18.29■□□□□ 0.52
NPHP4-207ENST00000470763 UBE2Q2Q8WVN8 375 aa18.29■□□□□ 0.52
NPHP4-207ENST00000470763 RPRD2Q5VT52 1461 aaKnown RBP18.29■□□□□ 0.52
NPHP4-207ENST00000470763 SLC4A3P48751 1232 aa18.28■□□□□ 0.52
NPHP4-207ENST00000470763 ANKRD30BQ9BXX2 1392 aa18.28■□□□□ 0.52
NPHP4-207ENST00000470763 EHBP1L1Q8N3D4 1523 aa18.27■□□□□ 0.52
NPHP4-207ENST00000470763 TSPOAP1O95153 1857 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms