RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 IQSEC2Q5JU85 1478 aa7.52□□□□□ -1.21
CPS1-205ENST00000467353 RAPGEF2Q9Y4G8 1499 aa7.52□□□□□ -1.21
CPS1-205ENST00000467353 P3H3Q8IVL6 736 aa7.52□□□□□ -1.21
CPS1-205ENST00000467353 CNKSR2Q8WXI2 1034 aa7.52□□□□□ -1.21
CPS1-205ENST00000467353 ARHGEF40Q8TER5 1519 aa7.52□□□□□ -1.21
CPS1-205ENST00000467353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.51□□□□□ -1.21
CPS1-205ENST00000467353 HNRNPUL2Q1KMD3 747 aaKnown RBP7.51□□□□□ -1.21
CPS1-205ENST00000467353 ABCA9Q8IUA7 1624 aa7.51□□□□□ -1.21
CPS1-205ENST00000467353 ZNF335Q9H4Z2 1342 aaPredicted RBP7.51□□□□□ -1.21
CPS1-205ENST00000467353 UHRF1BP1Q6BDS2 1440 aa7.5□□□□□ -1.21
CPS1-205ENST00000467353 SIGLEC1Q9BZZ2 1709 aa7.49□□□□□ -1.21
CPS1-205ENST00000467353 GOLGA3Q08378 1498 aa7.49□□□□□ -1.21
CPS1-205ENST00000467353 TTC37Q6PGP7 1564 aa7.49□□□□□ -1.21
CPS1-205ENST00000467353 NCKAP5LQ9HCH0 1330 aa7.49□□□□□ -1.21
CPS1-205ENST00000467353 PIP4K2BP78356 416 aa7.48□□□□□ -1.21
CPS1-205ENST00000467353 FAM9AQ8IZU1 332 aaPredicted RBP7.48□□□□□ -1.21
CPS1-205ENST00000467353 ZFYVE16Q7Z3T8 1539 aa7.47□□□□□ -1.21
CPS1-205ENST00000467353 ARHGEF12Q9NZN5 1544 aa7.47□□□□□ -1.21
CPS1-205ENST00000467353 MED1Q15648 1581 aaPredicted RBP7.47□□□□□ -1.21
CPS1-205ENST00000467353 MAGI2Q86UL8 1455 aa7.47□□□□□ -1.21
CPS1-205ENST00000467353 NCOA1Q15788 1441 aa7.46□□□□□ -1.21
CPS1-205ENST00000467353 PLEKHD1A6NEE1 506 aa7.46□□□□□ -1.22
CPS1-205ENST00000467353 FOXD4L1Q9NU39 408 aa7.46□□□□□ -1.22
CPS1-205ENST00000467353 ATP10AO60312 1499 aa7.46□□□□□ -1.22
CPS1-205ENST00000467353 PREX1Q8TCU6 1659 aa7.45□□□□□ -1.22
CPS1-205ENST00000467353 ZBTB22O15209 634 aa7.45□□□□□ -1.22
CPS1-205ENST00000467353 RGS17Q9UGC6 210 aaPredicted RBP7.45□□□□□ -1.22
CPS1-205ENST00000467353 SCAPERQ9BY12 1400 aa7.44□□□□□ -1.22
CPS1-205ENST00000467353 ZMYM4Q5VZL5 1548 aa7.44□□□□□ -1.22
CPS1-205ENST00000467353 RICTORQ6R327 1708 aa7.44□□□□□ -1.22
CPS1-205ENST00000467353 TRAPPC8Q9Y2L5 1435 aa7.44□□□□□ -1.22
CPS1-205ENST00000467353 EFCAB5A4FU69 1503 aa7.43□□□□□ -1.22
CPS1-205ENST00000467353 HECW1Q76N89 1606 aa7.43□□□□□ -1.22
CPS1-205ENST00000467353 C9orf84Q5VXU9 1444 aa7.43□□□□□ -1.22
CPS1-205ENST00000467353 FER1L4A9Z1Z3 1794 aa7.42□□□□□ -1.22
CPS1-205ENST00000467353 TOM1O60784 492 aa7.42□□□□□ -1.22
CPS1-205ENST00000467353 AFAP1Q8N556 730 aa7.42□□□□□ -1.22
CPS1-205ENST00000467353 ESF1Q9H501 851 aaKnown RBP7.4□□□□□ -1.22
CPS1-205ENST00000467353 NUP153P49790 1475 aaKnown RBP7.4□□□□□ -1.22
CPS1-205ENST00000467353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.39□□□□□ -1.23
CPS1-205ENST00000467353 PKD2Q13563 968 aa7.39□□□□□ -1.23
CPS1-205ENST00000467353 RTN4Q9NQC3 1192 aaKnown RBP7.39□□□□□ -1.23
CPS1-205ENST00000467353 CAMSAP1Q5T5Y3 1602 aa7.38□□□□□ -1.23
CPS1-205ENST00000467353 PLCH2O75038 1416 aa7.38□□□□□ -1.23
CPS1-205ENST00000467353 EFCAB2Q5VUJ9 269 aa7.38□□□□□ -1.23
CPS1-205ENST00000467353 POTEAQ6S8J7 498 aa7.38□□□□□ -1.23
CPS1-205ENST00000467353 MYT1LQ9UL68 1186 aa7.38□□□□□ -1.23
CPS1-205ENST00000467353 RANGAP1P46060 587 aaPredicted RBP7.36□□□□□ -1.23
CPS1-205ENST00000467353 ZMYM3Q14202 1370 aa7.35□□□□□ -1.23
CPS1-205ENST00000467353 SETD1BQ9UPS6 1966 aaKnown RBP7.35□□□□□ -1.23
CPS1-205ENST00000467353 PRXQ9BXM0 1461 aa7.35□□□□□ -1.23
CPS1-205ENST00000467353 RAPGEF6Q8TEU7 1601 aa7.34□□□□□ -1.23
CPS1-205ENST00000467353 TCOF1Q13428 1488 aaKnown RBP7.34□□□□□ -1.23
CPS1-205ENST00000467353 NPATQ14207 1427 aa7.34□□□□□ -1.23
CPS1-205ENST00000467353 CFAP74Q9C0B2 1584 aa7.33□□□□□ -1.24
CPS1-205ENST00000467353 C3P01024 1663 aa7.33□□□□□ -1.24
CPS1-205ENST00000467353 CTTNBP2Q8WZ74 1663 aa7.32□□□□□ -1.24
CPS1-205ENST00000467353 PLA2R1Q13018 1463 aa7.32□□□□□ -1.24
CPS1-205ENST00000467353 CNTLNQ9NXG0 1405 aa7.32□□□□□ -1.24
CPS1-205ENST00000467353 ZNF518AQ6AHZ1 1483 aa7.31□□□□□ -1.24
CPS1-205ENST00000467353 SHANK2Q9UPX8 1470 aa7.31□□□□□ -1.24
CPS1-205ENST00000467353 ALKQ9UM73 1620 aa7.31□□□□□ -1.24
CPS1-205ENST00000467353 PTPRKQ15262 1439 aa7.31□□□□□ -1.24
CPS1-205ENST00000467353 AGLP35573 1532 aa7.31□□□□□ -1.24
CPS1-205ENST00000467353 MLH3Q9UHC1 1453 aa7.3□□□□□ -1.24
CPS1-205ENST00000467353 DIP2CQ9Y2E4 1556 aa7.29□□□□□ -1.24
CPS1-205ENST00000467353 CPS1P31327 1500 aa7.29□□□□□ -1.24
CPS1-205ENST00000467353 UPF1Q92900 1129 aaKnown RBP eCLIP7.29□□□□□ -1.24
CPS1-205ENST00000467353 SAMD9Q5K651 1589 aa7.29□□□□□ -1.24
CPS1-205ENST00000467353 REREQ9P2R6 1566 aa7.29□□□□□ -1.24
CPS1-205ENST00000467353 KDM5CP41229 1560 aa7.28□□□□□ -1.24
CPS1-205ENST00000467353 ATP1B4Q9UN42 357 aaPredicted RBP7.27□□□□□ -1.25
CPS1-205ENST00000467353 SRCAPQ6ZRS2 3230 aa7.27□□□□□ -1.25
CPS1-205ENST00000467353 CDK13Q14004 1512 aaKnown RBP7.27□□□□□ -1.25
CPS1-205ENST00000467353 MSH5O43196 834 aa7.26□□□□□ -1.25
CPS1-205ENST00000467353 FBXO31Q5XUX0 539 aaPredicted RBP7.26□□□□□ -1.25
CPS1-205ENST00000467353 GGT6Q6P531 493 aa7.26□□□□□ -1.25
CPS1-205ENST00000467353 ANKLE2Q86XL3 938 aa7.26□□□□□ -1.25
CPS1-205ENST00000467353 ABCA6Q8N139 1617 aa7.26□□□□□ -1.25
CPS1-205ENST00000467353 RNF216Q9NWF9 866 aaPredicted RBP7.25□□□□□ -1.25
CPS1-205ENST00000467353 CEP170BQ9Y4F5 1589 aaPredicted RBP7.25□□□□□ -1.25
CPS1-205ENST00000467353 ARHGAP5Q13017 1502 aa7.24□□□□□ -1.25
CPS1-205ENST00000467353 CDK11AQ9UQ88 783 aaPredicted RBP7.24□□□□□ -1.25
CPS1-205ENST00000467353 VWDEQ8N2E2 1590 aa7.24□□□□□ -1.25
CPS1-205ENST00000467353 A2ML1A8K2U0 1454 aa7.24□□□□□ -1.25
CPS1-205ENST00000467353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.23□□□□□ -1.25
CPS1-205ENST00000467353 LRRC7Q96NW7 1537 aa7.23□□□□□ -1.25
CPS1-205ENST00000467353 NEURL4Q96JN8 1562 aa7.22□□□□□ -1.25
CPS1-205ENST00000467353 THEMISQ8N1K5 641 aaPredicted RBP7.22□□□□□ -1.25
CPS1-205ENST00000467353 MYO3AQ8NEV4 1616 aa7.22□□□□□ -1.25
CPS1-205ENST00000467353 NPHP4O75161 1426 aaPredicted RBP7.21□□□□□ -1.25
CPS1-205ENST00000467353 HNRNPMP52272 730 aaKnown RBP eCLIP7.21□□□□□ -1.26
CPS1-205ENST00000467353 SPAG9O60271 1321 aaKnown RBP7.21□□□□□ -1.26
CPS1-205ENST00000467353 DNMT1P26358 1616 aaKnown RBP7.2□□□□□ -1.26
CPS1-205ENST00000467353 ZNF142P52746 1687 aaPredicted RBP7.2□□□□□ -1.26
CPS1-205ENST00000467353 TRIM52Q96A61 297 aa7.2□□□□□ -1.26
CPS1-205ENST00000467353 ZNF777Q9ULD5 760 aaPredicted RBP7.2□□□□□ -1.26
CPS1-205ENST00000467353 TNRQ92752 1358 aa7.2□□□□□ -1.26
CPS1-205ENST00000467353 KIF14Q15058 1648 aa7.19□□□□□ -1.26
CPS1-205ENST00000467353 TROQ12816 1431 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms