RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 RIMBP3CA6NJZ7 1639 aa8.87□□□□□ -0.99
PDCD4-204ENST00000462577 RIMBP3BA6NNM3 1639 aa8.87□□□□□ -0.99
PDCD4-204ENST00000462577 RIMBP3Q9UFD9 1639 aa8.87□□□□□ -0.99
PDCD4-204ENST00000462577 LHX8Q68G74 356 aa8.86□□□□□ -0.99
PDCD4-204ENST00000462577 SGIP1Q9BQI5 828 aa8.86□□□□□ -0.99
PDCD4-204ENST00000462577 DNAJC5Q9H3Z4 198 aa8.86□□□□□ -0.99
PDCD4-204ENST00000462577 IFNL1Q8IU54 200 aa8.85□□□□□ -0.99
PDCD4-204ENST00000462577 NUP160Q12769 1436 aa8.84□□□□□ -0.99
PDCD4-204ENST00000462577 CHRM1P11229 460 aaPredicted RBP8.82□□□□□ -1
PDCD4-204ENST00000462577 ATMINO43313 823 aaPredicted RBP8.81□□□□□ -1
PDCD4-204ENST00000462577 PCDHB8Q9UN66 801 aa8.81□□□□□ -1
PDCD4-204ENST00000462577 IGF1RP08069 1367 aa8.81□□□□□ -1
PDCD4-204ENST00000462577 EEA1Q15075 1411 aa8.8□□□□□ -1
PDCD4-204ENST00000462577 ARHGEF11O15085 1522 aa8.8□□□□□ -1
PDCD4-204ENST00000462577 KIF21BO75037 1637 aa8.8□□□□□ -1
PDCD4-204ENST00000462577 ASTLQ6HA08 431 aaPredicted RBP8.8□□□□□ -1
PDCD4-204ENST00000462577 PELP1Q8IZL8 1130 aaKnown RBP8.8□□□□□ -1
PDCD4-204ENST00000462577 BMP2KQ9NSY1 1161 aaPredicted RBP8.8□□□□□ -1
PDCD4-204ENST00000462577 ATN1P54259 1190 aaPredicted RBP8.79□□□□□ -1
PDCD4-204ENST00000462577 TRIM41Q8WV44 630 aa8.79□□□□□ -1
PDCD4-204ENST00000462577 TIE1P35590 1138 aa8.78□□□□□ -1
PDCD4-204ENST00000462577 CHMP7Q8WUX9 453 aaPredicted RBP8.78□□□□□ -1
PDCD4-204ENST00000462577 IQGAP2Q13576 1575 aa8.78□□□□□ -1
PDCD4-204ENST00000462577 RAPGEF2Q9Y4G8 1499 aa8.77□□□□□ -1
PDCD4-204ENST00000462577 PRXQ9BXM0 1461 aa8.77□□□□□ -1.01
PDCD4-204ENST00000462577 TTLL13PA6NNM8 815 aa8.76□□□□□ -1.01
PDCD4-204ENST00000462577 KIAA0586Q9BVV6 1533 aa8.75□□□□□ -1.01
PDCD4-204ENST00000462577 CARMIL1Q5VZK9 1371 aa8.75□□□□□ -1.01
PDCD4-204ENST00000462577 ZNF467Q7Z7K2 595 aaPredicted RBP8.75□□□□□ -1.01
PDCD4-204ENST00000462577 TMEM106CQ9BVX2 250 aa8.74□□□□□ -1.01
PDCD4-204ENST00000462577 ERCC6L2Q5T890 1561 aa8.73□□□□□ -1.01
PDCD4-204ENST00000462577 ARAP1Q96P48 1450 aa8.72□□□□□ -1.01
PDCD4-204ENST00000462577 UGGT2Q9NYU1 1516 aa8.72□□□□□ -1.01
PDCD4-204ENST00000462577 PKD2Q13563 968 aa8.71□□□□□ -1.02
PDCD4-204ENST00000462577 TRIM35Q9UPQ4 493 aa8.71□□□□□ -1.02
PDCD4-204ENST00000462577 SAMD9Q5K651 1589 aa8.7□□□□□ -1.02
PDCD4-204ENST00000462577 KIAA0556O60303 1618 aa8.7□□□□□ -1.02
PDCD4-204ENST00000462577 SLC39A7Q92504 469 aa8.7□□□□□ -1.02
PDCD4-204ENST00000462577 PSEN1P49768 467 aa8.69□□□□□ -1.02
PDCD4-204ENST00000462577 RNF25Q96BH1 459 aaPredicted RBP8.69□□□□□ -1.02
PDCD4-204ENST00000462577 METRNQ9UJH8 293 aa8.69□□□□□ -1.02
PDCD4-204ENST00000462577 ECM2O94769 699 aaPredicted RBP8.68□□□□□ -1.02
PDCD4-204ENST00000462577 C7P10643 843 aa8.68□□□□□ -1.02
PDCD4-204ENST00000462577 PDAP1Q13442 181 aaKnown RBP8.67□□□□□ -1.02
PDCD4-204ENST00000462577 DISP1Q96F81 1524 aa8.66□□□□□ -1.02
PDCD4-204ENST00000462577 ADCY10Q96PN6 1610 aa8.65□□□□□ -1.02
PDCD4-204ENST00000462577 PRG4Q92954 1404 aaPredicted RBP8.65□□□□□ -1.02
PDCD4-204ENST00000462577 POTEB2H3BUK9 544 aa8.65□□□□□ -1.02
PDCD4-204ENST00000462577 RIOK3O14730 519 aaKnown RBP8.65□□□□□ -1.02
PDCD4-204ENST00000462577 KIF13AQ9H1H9 1805 aa8.65□□□□□ -1.02
PDCD4-204ENST00000462577 EFCAB5A4FU69 1503 aa8.64□□□□□ -1.03
PDCD4-204ENST00000462577 GOLGA3Q08378 1498 aa8.64□□□□□ -1.03
PDCD4-204ENST00000462577 POTEFA5A3E0 1075 aa8.64□□□□□ -1.03
PDCD4-204ENST00000462577 CARMIL2Q6F5E8 1435 aa8.63□□□□□ -1.03
PDCD4-204ENST00000462577 RGL2O15211 777 aa8.62□□□□□ -1.03
PDCD4-204ENST00000462577 JPH4Q96JJ6 628 aa8.62□□□□□ -1.03
PDCD4-204ENST00000462577 COLQQ9Y215 455 aaPredicted RBP8.62□□□□□ -1.03
PDCD4-204ENST00000462577 SEC24BO95487 1268 aa8.61□□□□□ -1.03
PDCD4-204ENST00000462577 IER5LQ5T953 404 aa8.61□□□□□ -1.03
PDCD4-204ENST00000462577 VGFO15240 615 aaPredicted RBP8.6□□□□□ -1.03
PDCD4-204ENST00000462577 GOLGA2Q08379 1002 aa8.6□□□□□ -1.03
PDCD4-204ENST00000462577 ZCCHC11Q5TAX3 1644 aaKnown RBP8.6□□□□□ -1.03
PDCD4-204ENST00000462577 ABCA8O94911 1581 aa8.6□□□□□ -1.03
PDCD4-204ENST00000462577 UHRF1BP1LA0JNW5 1464 aa8.59□□□□□ -1.03
PDCD4-204ENST00000462577 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.59□□□□□ -1.03
PDCD4-204ENST00000462577 ZFP91Q96JP5 570 aaPredicted RBP8.59□□□□□ -1.03
PDCD4-204ENST00000462577 CABP2Q9NPB3 220 aa8.59□□□□□ -1.03
PDCD4-204ENST00000462577 PLSCR2Q9NRY7 297 aa8.59□□□□□ -1.03
PDCD4-204ENST00000462577 MAPKBP1O60336 1514 aa8.59□□□□□ -1.03
PDCD4-204ENST00000462577 ABCC2Q92887 1545 aa8.59□□□□□ -1.03
PDCD4-204ENST00000462577 RAPGEF6Q8TEU7 1601 aa8.58□□□□□ -1.04
PDCD4-204ENST00000462577 LRRIQ1Q96JM4 1722 aa8.58□□□□□ -1.04
PDCD4-204ENST00000462577 TNIKQ9UKE5 1360 aa8.58□□□□□ -1.04
PDCD4-204ENST00000462577 POTEJP0CG39 1038 aa8.57□□□□□ -1.04
PDCD4-204ENST00000462577 IRX5P78411 483 aaPredicted RBP8.57□□□□□ -1.04
PDCD4-204ENST00000462577 MKRN3Q13064 507 aaKnown RBP8.57□□□□□ -1.04
PDCD4-204ENST00000462577 PLCG2P16885 1265 aa8.55□□□□□ -1.04
PDCD4-204ENST00000462577 CYB5RLQ6IPT4 315 aa8.55□□□□□ -1.04
PDCD4-204ENST00000462577 OCEL1Q9H607 264 aa8.55□□□□□ -1.04
PDCD4-204ENST00000462577 KDM5BQ9UGL1 1544 aa8.54□□□□□ -1.04
PDCD4-204ENST00000462577 DIP2BQ9P265 1576 aa8.54□□□□□ -1.04
PDCD4-204ENST00000462577 TAOK2Q9UL54 1235 aa8.54□□□□□ -1.04
PDCD4-204ENST00000462577 PTPRGP23470 1445 aa8.54□□□□□ -1.04
PDCD4-204ENST00000462577 FAM9AQ8IZU1 332 aaPredicted RBP8.53□□□□□ -1.04
PDCD4-204ENST00000462577 EFCAB3Q8N7B9 438 aa8.53□□□□□ -1.04
PDCD4-204ENST00000462577 OTUD5Q96G74 571 aa8.53□□□□□ -1.04
PDCD4-204ENST00000462577 UACAQ9BZF9 1416 aa8.53□□□□□ -1.04
PDCD4-204ENST00000462577 BCL11BQ9C0K0 894 aaPredicted RBP8.52□□□□□ -1.05
PDCD4-204ENST00000462577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.52□□□□□ -1.056e-8■□□□□ 10.7
PDCD4-204ENST00000462577 CFAP43Q8NDM7 1665 aa8.52□□□□□ -1.05
PDCD4-204ENST00000462577 ARHGAP35Q9NRY4 1499 aa8.51□□□□□ -1.05
PDCD4-204ENST00000462577 HECW1Q76N89 1606 aa8.51□□□□□ -1.05
PDCD4-204ENST00000462577 MAP3K4Q9Y6R4 1608 aa8.51□□□□□ -1.05
PDCD4-204ENST00000462577 PPRC1Q5VV67 1664 aaKnown RBP8.51□□□□□ -1.05
PDCD4-204ENST00000462577 STK25O00506 426 aa8.51□□□□□ -1.05
PDCD4-204ENST00000462577 PDCD7Q8N8D1 485 aaKnown RBP8.51□□□□□ -1.05
PDCD4-204ENST00000462577 STK24Q9Y6E0 443 aa8.51□□□□□ -1.05
PDCD4-204ENST00000462577 GLI2P10070 1586 aa8.51□□□□□ -1.05
PDCD4-204ENST00000462577 TSPOAP1O95153 1857 aa8.5□□□□□ -1.05
PDCD4-204ENST00000462577 PLB1Q6P1J6 1458 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms