RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 AEBP2Q6ZN18 517 aaPredicted RBP17.96■□□□□ 0.47
PDCD4-204ENST00000462577 CHIC1Q5VXU3 224 aa17.32■□□□□ 0.36
PDCD4-204ENST00000462577 PHF23Q9BUL5 403 aaPredicted RBP15.25■□□□□ 0.03
PDCD4-204ENST00000462577 SENP3Q9H4L4 574 aaPredicted RBP15.22■□□□□ 0.03
PDCD4-204ENST00000462577 FOXD1Q16676 465 aa14.19□□□□□ -0.14
PDCD4-204ENST00000462577 PLPPR3Q6T4P5 718 aa13.97□□□□□ -0.17
PDCD4-204ENST00000462577 PPP6R1Q9UPN7 881 aa13.53□□□□□ -0.24
PDCD4-204ENST00000462577 ADRA2BP18089 450 aa13.5□□□□□ -0.25
PDCD4-204ENST00000462577 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
PDCD4-204ENST00000462577 PIAS4Q8N2W9 510 aaPredicted RBP13.32□□□□□ -0.28
PDCD4-204ENST00000462577 MSH5O43196 834 aa13.11□□□□□ -0.31
PDCD4-204ENST00000462577 NISCHQ9Y2I1 1504 aa12.72□□□□□ -0.37
PDCD4-204ENST00000462577 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
PDCD4-204ENST00000462577 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
PDCD4-204ENST00000462577 SCAF1Q9H7N4 1312 aaKnown RBP12.3□□□□□ -0.44
PDCD4-204ENST00000462577 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
PDCD4-204ENST00000462577 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
PDCD4-204ENST00000462577 NCBP3Q53F19 620 aaKnown RBP11.89□□□□□ -0.51
PDCD4-204ENST00000462577 KCNA4P22459 653 aa11.82□□□□□ -0.52
PDCD4-204ENST00000462577 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
PDCD4-204ENST00000462577 RNF216Q9NWF9 866 aaPredicted RBP11.79□□□□□ -0.52
PDCD4-204ENST00000462577 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
PDCD4-204ENST00000462577 DCAF8L1A6NGE4 600 aa11.65□□□□□ -0.54
PDCD4-204ENST00000462577 CCDC180Q9P1Z9 1646 aa11.48□□□□□ -0.57
PDCD4-204ENST00000462577 DNAJC5BQ9UF47 199 aa11.38□□□□□ -0.59
PDCD4-204ENST00000462577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.26□□□□□ -0.61
PDCD4-204ENST00000462577 CACNB1Q02641 598 aaPredicted RBP11.25□□□□□ -0.61
PDCD4-204ENST00000462577 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
PDCD4-204ENST00000462577 SLC4A1APQ9BWU0 796 aaKnown RBP11.2□□□□□ -0.62
PDCD4-204ENST00000462577 SLC4A2P04920 1241 aa11.16□□□□□ -0.62
PDCD4-204ENST00000462577 C1QBPQ07021 282 aaKnown RBP11.07□□□□□ -0.64
PDCD4-204ENST00000462577 U3KPZ7 1027 aaPredicted RBP11.06□□□□□ -0.64
PDCD4-204ENST00000462577 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
PDCD4-204ENST00000462577 ABCC9O60706 1549 aa10.89□□□□□ -0.67
PDCD4-204ENST00000462577 ZBTB22O15209 634 aa10.88□□□□□ -0.67
PDCD4-204ENST00000462577 MYCNP04198 464 aaPredicted RBP10.84□□□□□ -0.67
PDCD4-204ENST00000462577 SPINK5Q9NQ38 1064 aaPredicted RBP10.82□□□□□ -0.68
PDCD4-204ENST00000462577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
PDCD4-204ENST00000462577 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
PDCD4-204ENST00000462577 CAPN15O75808 1086 aa10.78□□□□□ -0.68
PDCD4-204ENST00000462577 SAMD1Q6SPF0 538 aaPredicted RBP10.77□□□□□ -0.69
PDCD4-204ENST00000462577 APLP2Q06481 763 aa10.72□□□□□ -0.69
PDCD4-204ENST00000462577 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
PDCD4-204ENST00000462577 EHMT2Q96KQ7 1210 aa10.69□□□□□ -0.7
PDCD4-204ENST00000462577 NACADO15069 1562 aa10.65□□□□□ -0.7
PDCD4-204ENST00000462577 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.7
PDCD4-204ENST00000462577 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
PDCD4-204ENST00000462577 MYO15BQ96JP2 1530 aa10.64□□□□□ -0.71
PDCD4-204ENST00000462577 DSG3P32926 999 aa10.64□□□□□ -0.71
PDCD4-204ENST00000462577 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
PDCD4-204ENST00000462577 ZCCHC6Q5VYS8 1495 aaKnown RBP10.63□□□□□ -0.71
PDCD4-204ENST00000462577 ATF5Q9Y2D1 282 aaPredicted RBP10.62□□□□□ -0.71
PDCD4-204ENST00000462577 DCAF1Q9Y4B6 1507 aa10.61□□□□□ -0.71
PDCD4-204ENST00000462577 UNC13AQ9UPW8 1703 aa10.59□□□□□ -0.71
PDCD4-204ENST00000462577 ABCB7O75027 752 aa10.58□□□□□ -0.72
PDCD4-204ENST00000462577 ATXN8OSP0DMR3 200 aa10.51□□□□□ -0.73
PDCD4-204ENST00000462577 POLA2Q14181 598 aa10.48□□□□□ -0.73
PDCD4-204ENST00000462577 BICRAQ9NZM4 1560 aa10.34□□□□□ -0.75
PDCD4-204ENST00000462577 POTEHQ6S545 545 aa10.32□□□□□ -0.76
PDCD4-204ENST00000462577 SCRIBQ14160 1630 aa10.3□□□□□ -0.76
PDCD4-204ENST00000462577 DCAF8L2P0C7V8 631 aa10.3□□□□□ -0.76
PDCD4-204ENST00000462577 SHROOM4Q9ULL8 1493 aa10.28□□□□□ -0.76
PDCD4-204ENST00000462577 ZBTB12Q9Y330 459 aaPredicted RBP10.22□□□□□ -0.77
PDCD4-204ENST00000462577 FBLN2P98095 1184 aa10.13□□□□□ -0.79
PDCD4-204ENST00000462577 MKRN4PQ13434 485 aaPredicted RBP10.13□□□□□ -0.79
PDCD4-204ENST00000462577 OSCARQ8IYS5 282 aa10.12□□□□□ -0.79
PDCD4-204ENST00000462577 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
PDCD4-204ENST00000462577 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
PDCD4-204ENST00000462577 EIF4G1Q04637 1599 aaKnown RBP10.02□□□□□ -0.81
PDCD4-204ENST00000462577 CC2D2AQ9P2K1 1620 aa9.98□□□□□ -0.81
PDCD4-204ENST00000462577 SPDYE2BA6NHP3 402 aa9.96□□□□□ -0.82
PDCD4-204ENST00000462577 SPDYE6P0CI01 402 aa9.96□□□□□ -0.82
PDCD4-204ENST00000462577 SPDYE2Q495Y8 402 aa9.96□□□□□ -0.82
PDCD4-204ENST00000462577 AKT1S1Q96B36 256 aa9.95□□□□□ -0.82
PDCD4-204ENST00000462577 ZNF692Q9BU19 519 aaPredicted RBP9.92□□□□□ -0.82
PDCD4-204ENST00000462577 SMARCA4P51532 1647 aa9.92□□□□□ -0.82
PDCD4-204ENST00000462577 BAZ1AQ9NRL2 1556 aaPredicted RBP9.88□□□□□ -0.83
PDCD4-204ENST00000462577 REM2Q8IYK8 340 aaPredicted RBP9.88□□□□□ -0.83
PDCD4-204ENST00000462577 SSUH2Q9Y2M2 353 aa9.87□□□□□ -0.83
PDCD4-204ENST00000462577 PEG3Q9GZU2 1588 aa9.86□□□□□ -0.83
PDCD4-204ENST00000462577 CECR2Q9BXF3 1484 aa9.82□□□□□ -0.84
PDCD4-204ENST00000462577 SMARCA2P51531 1590 aa9.82□□□□□ -0.84
PDCD4-204ENST00000462577 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
PDCD4-204ENST00000462577 HMGXB3Q12766 1538 aa9.8□□□□□ -0.84
PDCD4-204ENST00000462577 CHRDL2Q6WN34 429 aa9.79□□□□□ -0.84
PDCD4-204ENST00000462577 MROH2BQ7Z745 1585 aa9.78□□□□□ -0.84
PDCD4-204ENST00000462577 PITPNM1O00562 1244 aa9.77□□□□□ -0.85
PDCD4-204ENST00000462577 NCAPD3P42695 1498 aa9.75□□□□□ -0.85
PDCD4-204ENST00000462577 ATAD2BQ9ULI0 1458 aa9.75□□□□□ -0.85
PDCD4-204ENST00000462577 WIZO95785 1651 aa9.74□□□□□ -0.85
PDCD4-204ENST00000462577 CLEC11AQ9Y240 323 aa9.72□□□□□ -0.85
PDCD4-204ENST00000462577 SPDYE1Q8NFV5 336 aaPredicted RBP9.71□□□□□ -0.86
PDCD4-204ENST00000462577 BAZ1BQ9UIG0 1483 aaKnown RBP9.67□□□□□ -0.86
PDCD4-204ENST00000462577 PRDM2Q13029 1718 aa9.66□□□□□ -0.86
PDCD4-204ENST00000462577 RSF1Q96T23 1441 aaPredicted RBP9.65□□□□□ -0.87
PDCD4-204ENST00000462577 FKBP8Q14318 412 aa9.64□□□□□ -0.87
PDCD4-204ENST00000462577 TOP2AP11388 1531 aaKnown RBP9.64□□□□□ -0.87
PDCD4-204ENST00000462577 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
PDCD4-204ENST00000462577 FXR2P51116 673 aaKnown RBP eCLIP9.62□□□□□ -0.87
PDCD4-204ENST00000462577 PRR29P0C7W0 189 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms