RNA–Protein interactions for RNA: ENST00000453447.6

SPIRE1-206, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 5 BASIC

Gene SPIRE1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-206ENST00000453447 MAGI3Q5TCQ9 1506 aa9.95□□□□□ -0.82
SPIRE1-206ENST00000453447 RUSC2Q8N2Y8 1516 aa9.95□□□□□ -0.82
SPIRE1-206ENST00000453447 CDK11AQ9UQ88 783 aaPredicted RBP9.95□□□□□ -0.82
SPIRE1-206ENST00000453447 RRBP1Q9P2E9 1410 aaKnown RBP9.95□□□□□ -0.82
SPIRE1-206ENST00000453447 KCNH8Q96L42 1107 aa9.94□□□□□ -0.82
SPIRE1-206ENST00000453447 CUL7Q14999 1698 aa9.93□□□□□ -0.82
SPIRE1-206ENST00000453447 FHAD1B1AJZ9 1412 aa9.92□□□□□ -0.82
SPIRE1-206ENST00000453447 ARAP3Q8WWN8 1544 aa9.92□□□□□ -0.82
SPIRE1-206ENST00000453447 SETD1AO15047 1707 aaKnown RBP9.9□□□□□ -0.82
SPIRE1-206ENST00000453447 ITGAEP38570 1179 aa9.89□□□□□ -0.83
SPIRE1-206ENST00000453447 ABCA10Q8WWZ4 1543 aa9.89□□□□□ -0.83
SPIRE1-206ENST00000453447 PPP1R15AO75807 674 aaPredicted RBP9.88□□□□□ -0.83
SPIRE1-206ENST00000453447 ANO8Q9HCE9 1232 aaPredicted RBP9.88□□□□□ -0.83
SPIRE1-206ENST00000453447 UPF1Q92900 1129 aaKnown RBP eCLIP9.88□□□□□ -0.83
SPIRE1-206ENST00000453447 UHRF1BP1LA0JNW5 1464 aa9.87□□□□□ -0.83
SPIRE1-206ENST00000453447 TTC37Q6PGP7 1564 aa9.87□□□□□ -0.83
SPIRE1-206ENST00000453447 UBE2Q2Q8WVN8 375 aa9.86□□□□□ -0.83
SPIRE1-206ENST00000453447 ARID4BQ4LE39 1312 aaPredicted RBP9.86□□□□□ -0.83
SPIRE1-206ENST00000453447 POTEAQ6S8J7 498 aa9.85□□□□□ -0.83
SPIRE1-206ENST00000453447 TIMELESSQ9UNS1 1208 aa9.85□□□□□ -0.83
SPIRE1-206ENST00000453447 NOP58Q9Y2X3 529 aaKnown RBP9.84□□□□□ -0.83
SPIRE1-206ENST00000453447 BIVM-ERCC5R4GMW8 1640 aa9.83□□□□□ -0.84
SPIRE1-206ENST00000453447 PTPRGP23470 1445 aa9.83□□□□□ -0.84
SPIRE1-206ENST00000453447 CUX1P39880 1505 aa9.83□□□□□ -0.84
SPIRE1-206ENST00000453447 ERICH3Q5RHP9 1530 aa9.83□□□□□ -0.84
SPIRE1-206ENST00000453447 CD109Q6YHK3 1445 aa9.82□□□□□ -0.84
SPIRE1-206ENST00000453447 ANP32CO43423 234 aa9.82□□□□□ -0.84
SPIRE1-206ENST00000453447 PPP4R2Q9NY27 417 aa9.82□□□□□ -0.84
SPIRE1-206ENST00000453447 PLPPR3Q6T4P5 718 aa9.82□□□□□ -0.84
SPIRE1-206ENST00000453447 RAPGEF2Q9Y4G8 1499 aa9.81□□□□□ -0.84
SPIRE1-206ENST00000453447 KDM5BQ9UGL1 1544 aa9.81□□□□□ -0.84
SPIRE1-206ENST00000453447 CCNB3Q8WWL7 1395 aa9.81□□□□□ -0.84
SPIRE1-206ENST00000453447 SRCAPQ6ZRS2 3230 aa9.81□□□□□ -0.84
SPIRE1-206ENST00000453447 DDX10Q13206 875 aaKnown RBP9.8□□□□□ -0.84
SPIRE1-206ENST00000453447 SALL2Q9Y467 1007 aaPredicted RBP9.8□□□□□ -0.84
SPIRE1-206ENST00000453447 SETD1BQ9UPS6 1966 aaKnown RBP9.8□□□□□ -0.84
SPIRE1-206ENST00000453447 UHRF1BP1Q6BDS2 1440 aa9.8□□□□□ -0.84
SPIRE1-206ENST00000453447 FER1L4A9Z1Z3 1794 aa9.8□□□□□ -0.84
SPIRE1-206ENST00000453447 NCBP3Q53F19 620 aaKnown RBP9.79□□□□□ -0.84
SPIRE1-206ENST00000453447 POGZQ7Z3K3 1410 aa9.79□□□□□ -0.84
SPIRE1-206ENST00000453447 TRIM52Q96A61 297 aa9.79□□□□□ -0.84
SPIRE1-206ENST00000453447 TOM1O60784 492 aa9.79□□□□□ -0.84
SPIRE1-206ENST00000453447 PIP4K2BP78356 416 aa9.79□□□□□ -0.84
SPIRE1-206ENST00000453447 RAB3GAP2Q9H2M9 1393 aa9.78□□□□□ -0.84
SPIRE1-206ENST00000453447 NCOA1Q15788 1441 aa9.77□□□□□ -0.85
SPIRE1-206ENST00000453447 PHLDB1Q86UU1 1377 aa9.77□□□□□ -0.85
SPIRE1-206ENST00000453447 PLEKHG5O94827 1062 aa9.77□□□□□ -0.85
SPIRE1-206ENST00000453447 WDR7Q9Y4E6 1490 aa9.77□□□□□ -0.85
SPIRE1-206ENST00000453447 ZCCHC11Q5TAX3 1644 aaKnown RBP9.76□□□□□ -0.85
SPIRE1-206ENST00000453447 ARHGEF40Q8TER5 1519 aa9.76□□□□□ -0.85
SPIRE1-206ENST00000453447 ZNF335Q9H4Z2 1342 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-206ENST00000453447 RTL5Q5HYW3 569 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-206ENST00000453447 MAP3K1Q13233 1512 aa9.75□□□□□ -0.85
SPIRE1-206ENST00000453447 PRXQ9BXM0 1461 aa9.75□□□□□ -0.85
SPIRE1-206ENST00000453447 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
SPIRE1-206ENST00000453447 FANCAO15360 1455 aa9.74□□□□□ -0.85
SPIRE1-206ENST00000453447 SETD5Q9C0A6 1442 aa9.74□□□□□ -0.85
SPIRE1-206ENST00000453447 C11orf95C9JLR9 678 aaPredicted RBP9.74□□□□□ -0.85
SPIRE1-206ENST00000453447 WASHC2AQ641Q2 1341 aa9.73□□□□□ -0.85
SPIRE1-206ENST00000453447 UACAQ9BZF9 1416 aa9.73□□□□□ -0.85
SPIRE1-206ENST00000453447 FRMPD1Q5SYB0 1578 aa9.72□□□□□ -0.85
SPIRE1-206ENST00000453447 PAK3O75914 559 aaPredicted RBP9.71□□□□□ -0.85
SPIRE1-206ENST00000453447 NBR1Q14596 966 aa9.71□□□□□ -0.85
SPIRE1-206ENST00000453447 IPO9Q96P70 1041 aaKnown RBP9.71□□□□□ -0.85
SPIRE1-206ENST00000453447 KANK4Q5T7N3 995 aaPredicted RBP9.71□□□□□ -0.86
SPIRE1-206ENST00000453447 USP35Q9P2H5 1018 aa9.71□□□□□ -0.86
SPIRE1-206ENST00000453447 ANP32AP39687 249 aaKnown RBP9.7□□□□□ -0.86
SPIRE1-206ENST00000453447 PODXL2Q9NZ53 605 aa9.7□□□□□ -0.86
SPIRE1-206ENST00000453447 RBM33Q96EV2 1170 aaKnown RBP9.7□□□□□ -0.86
SPIRE1-206ENST00000453447 ALKQ9UM73 1620 aa9.69□□□□□ -0.86
SPIRE1-206ENST00000453447 HNRNPUQ00839 825 aaKnown RBP eCLIP9.69□□□□□ -0.86
SPIRE1-206ENST00000453447 KIF27Q86VH2 1401 aa9.69□□□□□ -0.86
SPIRE1-206ENST00000453447 IL27Q8NEV9 243 aa9.68□□□□□ -0.86
SPIRE1-206ENST00000453447 WASHC2CQ9Y4E1 1318 aa9.68□□□□□ -0.86
SPIRE1-206ENST00000453447 ARHGEF12Q9NZN5 1544 aa9.68□□□□□ -0.86
SPIRE1-206ENST00000453447 PTPRKQ15262 1439 aa9.67□□□□□ -0.86
SPIRE1-206ENST00000453447 SIGLEC1Q9BZZ2 1709 aa9.67□□□□□ -0.86
SPIRE1-206ENST00000453447 RAPGEF3O95398 923 aa9.67□□□□□ -0.86
SPIRE1-206ENST00000453447 CCDC136Q96JN2 1154 aa9.67□□□□□ -0.86
SPIRE1-206ENST00000453447 IRX6P78412 446 aaPredicted RBP9.66□□□□□ -0.86
SPIRE1-206ENST00000453447 TIAM1Q13009 1591 aa9.66□□□□□ -0.86
SPIRE1-206ENST00000453447 ZBTB47Q9UFB7 747 aaPredicted RBP9.65□□□□□ -0.86
SPIRE1-206ENST00000453447 SLC34A2O95436 690 aa9.65□□□□□ -0.86
SPIRE1-206ENST00000453447 ARXQ96QS3 562 aa9.65□□□□□ -0.86
SPIRE1-206ENST00000453447 NCOA2Q15596 1464 aa9.65□□□□□ -0.87
SPIRE1-206ENST00000453447 CPS1P31327 1500 aa9.65□□□□□ -0.87
SPIRE1-206ENST00000453447 RANGAP1P46060 587 aaPredicted RBP9.64□□□□□ -0.87
SPIRE1-206ENST00000453447 ZBED9Q6R2W3 1325 aa9.64□□□□□ -0.87
SPIRE1-206ENST00000453447 SETBP1Q9Y6X0 1596 aa9.64□□□□□ -0.87
SPIRE1-206ENST00000453447 AKNAQ7Z591 1439 aa9.64□□□□□ -0.87
SPIRE1-206ENST00000453447 FOXD1Q16676 465 aa9.64□□□□□ -0.87
SPIRE1-206ENST00000453447 CARMIL2Q6F5E8 1435 aa9.63□□□□□ -0.87
SPIRE1-206ENST00000453447 NEO1Q92859 1461 aa9.63□□□□□ -0.87
SPIRE1-206ENST00000453447 CEBPAP49715 358 aaPredicted RBP9.62□□□□□ -0.87
SPIRE1-206ENST00000453447 B4GALNT3Q6L9W6 998 aa9.62□□□□□ -0.87
SPIRE1-206ENST00000453447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.62□□□□□ -0.87
SPIRE1-206ENST00000453447 ARHGAP35Q9NRY4 1499 aa9.62□□□□□ -0.87
SPIRE1-206ENST00000453447 CAMSAP1Q5T5Y3 1602 aa9.61□□□□□ -0.87
SPIRE1-206ENST00000453447 ZRANB1Q9UGI0 708 aa9.61□□□□□ -0.87
SPIRE1-206ENST00000453447 SIN3AQ96ST3 1273 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms