RNA–Protein interactions for RNA: ENST00000450584.5

LDHB-204, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 732 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-204ENST00000450584 EFCAB5A4FU69 1503 aa15.89■□□□□ 0.13
LDHB-204ENST00000450584 UHRF1BP1Q6BDS2 1440 aa15.88■□□□□ 0.13
LDHB-204ENST00000450584 HECW1Q76N89 1606 aa15.87■□□□□ 0.13
LDHB-204ENST00000450584 MAGI2Q86UL8 1455 aa15.83■□□□□ 0.12
LDHB-204ENST00000450584 UBAP1LF5GYI3 381 aa15.82■□□□□ 0.12
LDHB-204ENST00000450584 SETD1BQ9UPS6 1966 aaKnown RBP15.82■□□□□ 0.12
LDHB-204ENST00000450584 NCOA1Q15788 1441 aa15.81■□□□□ 0.12
LDHB-204ENST00000450584 CFAP74Q9C0B2 1584 aa15.8■□□□□ 0.12
LDHB-204ENST00000450584 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
LDHB-204ENST00000450584 RAPGEF6Q8TEU7 1601 aa15.79■□□□□ 0.12
LDHB-204ENST00000450584 ZNF335Q9H4Z2 1342 aaPredicted RBP15.78■□□□□ 0.12
LDHB-204ENST00000450584 C3P01024 1663 aa15.78■□□□□ 0.12
LDHB-204ENST00000450584 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.78■□□□□ 0.121e-8■■□□□ 12.6
LDHB-204ENST00000450584 C9orf84Q5VXU9 1444 aa15.77■□□□□ 0.12
LDHB-204ENST00000450584 ATP10AO60312 1499 aa15.77■□□□□ 0.11
LDHB-204ENST00000450584 NUP153P49790 1475 aaKnown RBP15.77■□□□□ 0.11
LDHB-204ENST00000450584 HSPA1LP34931 641 aa15.76■□□□□ 0.11
LDHB-204ENST00000450584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
LDHB-204ENST00000450584 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
LDHB-204ENST00000450584 SCAPERQ9BY12 1400 aa15.71■□□□□ 0.11
LDHB-204ENST00000450584 CAMSAP1Q5T5Y3 1602 aa15.71■□□□□ 0.11
LDHB-204ENST00000450584 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
LDHB-204ENST00000450584 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
LDHB-204ENST00000450584 EEA1Q15075 1411 aa15.68■□□□□ 0.1
LDHB-204ENST00000450584 TRAPPC8Q9Y2L5 1435 aa15.68■□□□□ 0.1
LDHB-204ENST00000450584 NCKAP5LQ9HCH0 1330 aa15.67■□□□□ 0.1
LDHB-204ENST00000450584 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
LDHB-204ENST00000450584 DIP2CQ9Y2E4 1556 aa15.65■□□□□ 0.1
LDHB-204ENST00000450584 PIP4K2BP78356 416 aa15.64■□□□□ 0.09
LDHB-204ENST00000450584 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
LDHB-204ENST00000450584 PLEKHD1A6NEE1 506 aa15.62■□□□□ 0.09
LDHB-204ENST00000450584 ALKQ9UM73 1620 aa15.61■□□□□ 0.09
LDHB-204ENST00000450584 PLCH2O75038 1416 aa15.61■□□□□ 0.09
LDHB-204ENST00000450584 KDM5CP41229 1560 aa15.61■□□□□ 0.09
LDHB-204ENST00000450584 REREQ9P2R6 1566 aa15.61■□□□□ 0.09
LDHB-204ENST00000450584 ABCA6Q8N139 1617 aa15.61■□□□□ 0.09
LDHB-204ENST00000450584 RGS17Q9UGC6 210 aaPredicted RBP15.59■□□□□ 0.09
LDHB-204ENST00000450584 TCOF1Q13428 1488 aaKnown RBP15.59■□□□□ 0.09
LDHB-204ENST00000450584 AGLP35573 1532 aa15.57■□□□□ 0.08
LDHB-204ENST00000450584 AFAP1Q8N556 730 aa15.56■□□□□ 0.08
LDHB-204ENST00000450584 ZNF518AQ6AHZ1 1483 aa15.56■□□□□ 0.08
LDHB-204ENST00000450584 ZNF142P52746 1687 aaPredicted RBP15.55■□□□□ 0.08
LDHB-204ENST00000450584 PLA2R1Q13018 1463 aa15.55■□□□□ 0.08
LDHB-204ENST00000450584 MYO3AQ8NEV4 1616 aa15.54■□□□□ 0.08
LDHB-204ENST00000450584 CDK13Q14004 1512 aaKnown RBP15.54■□□□□ 0.08
LDHB-204ENST00000450584 NPATQ14207 1427 aa15.53■□□□□ 0.08
LDHB-204ENST00000450584 MYO5CQ9NQX4 1742 aa15.52■□□□□ 0.08
LDHB-204ENST00000450584 TOM1O60784 492 aa15.51■□□□□ 0.07
LDHB-204ENST00000450584 CEP170BQ9Y4F5 1589 aaPredicted RBP15.5■□□□□ 0.07
LDHB-204ENST00000450584 LOC105371045A0A1W2PR82 267 aa15.5■□□□□ 0.07
LDHB-204ENST00000450584 PKD2Q13563 968 aa15.5■□□□□ 0.07
LDHB-204ENST00000450584 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
LDHB-204ENST00000450584 PPP6R1Q9UPN7 881 aa15.5■□□□□ 0.07
LDHB-204ENST00000450584 SUPT6HQ7KZ85 1726 aaKnown RBP15.5■□□□□ 0.07
LDHB-204ENST00000450584 MROH2AA6NES4 1674 aa15.5■□□□□ 0.07
LDHB-204ENST00000450584 SRCAPQ6ZRS2 3230 aa15.5■□□□□ 0.07
LDHB-204ENST00000450584 CNTLNQ9NXG0 1405 aa15.5■□□□□ 0.07
LDHB-204ENST00000450584 MLH3Q9UHC1 1453 aa15.48■□□□□ 0.07
LDHB-204ENST00000450584 EFCAB2Q5VUJ9 269 aa15.48■□□□□ 0.07
LDHB-204ENST00000450584 ESF1Q9H501 851 aaKnown RBP15.48■□□□□ 0.07
LDHB-204ENST00000450584 CPS1P31327 1500 aa15.48■□□□□ 0.07
LDHB-204ENST00000450584 KIF14Q15058 1648 aa15.47■□□□□ 0.07
LDHB-204ENST00000450584 NEURL4Q96JN8 1562 aa15.46■□□□□ 0.07
LDHB-204ENST00000450584 ZMYM3Q14202 1370 aa15.46■□□□□ 0.07
LDHB-204ENST00000450584 SETD1AO15047 1707 aaKnown RBP15.46■□□□□ 0.06
LDHB-204ENST00000450584 EHMT2Q96KQ7 1210 aa15.45■□□□□ 0.06
LDHB-204ENST00000450584 MYT1LQ9UL68 1186 aa15.45■□□□□ 0.06
LDHB-204ENST00000450584 SHANK2Q9UPX8 1470 aa15.45■□□□□ 0.06
LDHB-204ENST00000450584 RANGAP1P46060 587 aaPredicted RBP15.44■□□□□ 0.06
LDHB-204ENST00000450584 KIDINS220Q9ULH0 1771 aa15.44■□□□□ 0.06
LDHB-204ENST00000450584 ARHGAP5Q13017 1502 aa15.43■□□□□ 0.06
LDHB-204ENST00000450584 POTEAQ6S8J7 498 aa15.43■□□□□ 0.06
LDHB-204ENST00000450584 VWDEQ8N2E2 1590 aa15.43■□□□□ 0.06
LDHB-204ENST00000450584 PTPRKQ15262 1439 aa15.43■□□□□ 0.06
LDHB-204ENST00000450584 CLTCQ00610 1675 aaKnown RBP15.42■□□□□ 0.06
LDHB-204ENST00000450584 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
LDHB-204ENST00000450584 UBTFP17480 764 aaKnown RBP15.4■□□□□ 0.06
LDHB-204ENST00000450584 DNMT1P26358 1616 aaKnown RBP15.39■□□□□ 0.05
LDHB-204ENST00000450584 ABCC1P33527 1531 aa15.38■□□□□ 0.05
LDHB-204ENST00000450584 CDC42BPBQ9Y5S2 1711 aa15.38■□□□□ 0.05
LDHB-204ENST00000450584 ITSN2Q9NZM3 1697 aa15.38■□□□□ 0.05
LDHB-204ENST00000450584 STRCP1A6NGW2 1772 aa15.36■□□□□ 0.05
LDHB-204ENST00000450584 A2ML1A8K2U0 1454 aa15.35■□□□□ 0.05
LDHB-204ENST00000450584 RNF17Q9BXT8 1623 aaKnown RBP15.32■□□□□ 0.04
LDHB-204ENST00000450584 LRRC7Q96NW7 1537 aa15.31■□□□□ 0.04
LDHB-204ENST00000450584 PREX2Q70Z35 1606 aa15.31■□□□□ 0.04
LDHB-204ENST00000450584 PLXNC1O60486 1568 aa15.3■□□□□ 0.04
LDHB-204ENST00000450584 SAMD9LQ8IVG5 1584 aa15.3■□□□□ 0.04
LDHB-204ENST00000450584 TROQ12816 1431 aaPredicted RBP15.29■□□□□ 0.04
LDHB-204ENST00000450584 LRRIQ1Q96JM4 1722 aa15.26■□□□□ 0.03
LDHB-204ENST00000450584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
LDHB-204ENST00000450584 SYNMO15061 1565 aa15.24■□□□□ 0.03
LDHB-204ENST00000450584 UPF1Q92900 1129 aaKnown RBP eCLIP15.24■□□□□ 0.03
LDHB-204ENST00000450584 MED14O60244 1454 aa15.24■□□□□ 0.03
LDHB-204ENST00000450584 NPHP4O75161 1426 aaPredicted RBP15.24■□□□□ 0.03
LDHB-204ENST00000450584 DEPDC5O75140 1603 aa15.22■□□□□ 0.03
LDHB-204ENST00000450584 ATP1B4Q9UN42 357 aaPredicted RBP15.22■□□□□ 0.03
LDHB-204ENST00000450584 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
LDHB-204ENST00000450584 IQGAP1P46940 1657 aa15.22■□□□□ 0.03
LDHB-204ENST00000450584 INO80Q9ULG1 1556 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms